FastQCFastQC Report
Mon 7 Feb 2022
SRR12207406_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12207406_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91451743
Sequences flagged as poor quality0
Sequence length35-151
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGCC2433910.2661414556089981TruSeq Adapter, Index 5 (100% over 50bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGC1935680.21166135674417927TruSeq Adapter, Index 5 (100% over 50bp)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1036700.1133603325635904No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)