qPCR-data-7/21

library(tidyverse)

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qpcrd <- read.csv("../lsamp-2023/data/qPCR-data-2-21.csv", header = TRUE)

ggplot(data = qpcrd, mapping = aes(x = Subgroup, y = CqMean)) + 
  geom_boxplot() +
  facet_wrap('Target') +
  coord_cartesian(ylim = c(10, 40))

qpcrd %>%
  filter(Target == "Cg_HSP70(598/9)") %>%
ggplot(mapping = aes(x = Subgroup, y = CqMean)) + 
  geom_boxplot()  +
  geom_jitter(aes(color = History), width = 0.1, alpha = 0.7)

qpcrd %>%
  filter(Target == "Cg_HSP90(1532/3)") %>%
ggplot(mapping = aes(x = Subgroup, y = CqMean)) + 
  geom_boxplot()  +
  geom_jitter(aes(color = History), width = 0.1, alpha = 0.7)

qpcrd %>%
  filter(Target == "Cg_VIPERIN(1828/9)") %>%
ggplot(mapping = aes(x = Subgroup, y = CqMean)) + 
  geom_boxplot()  +
  geom_jitter(aes(color = History), width = 0.1, alpha = 0.7)