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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.12

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2024-06-04, 13:45 based on data in: /home/shared/8TB_HDD_03/sr320/github/laby-18s/output/04-kallisto

        General Statistics

        Showing 133/133 rows and 3/3 columns.
        Sample NameFrag Length% AlignedM Aligned
        139_S91_L001_R1_001_trim
        171.8bp
        63.3%
        0.1
        155_S44_L001_R1_001_trim
        172.0bp
        19.7%
        0.0
        176_S80_L001_R1_001_trim
        172.0bp
        41.5%
        0.0
        195_S1_L001_R1_001_trim
        0.0bp
        11.9%
        0.0
        210_S85_L001_R1_001_trim
        0.0bp
        75.6%
        0.0
        212_S6_L001_R1_001_trim
        0.0bp
        83.3%
        0.1
        216_S42_L001_R1_001_trim
        0.0bp
        71.0%
        0.1
        221_S26_L001_R1_001_trim
        0.0bp
        81.8%
        0.1
        228_S9_L001_R1_001_trim
        0.0bp
        13.8%
        0.0
        239_S74_L001_R1_001_trim
        0.0bp
        5.6%
        0.0
        242_S21_L001_R1_001_trim
        172.0bp
        43.5%
        0.1
        244_S45_L001_R1_001_trim
        172.0bp
        70.5%
        0.1
        247_S86_L001_R1_001_trim
        0.0bp
        67.1%
        0.0
        258_S81_L001_R1_001_trim
        172.0bp
        24.4%
        0.0
        259_S51_L001_R1_001_trim
        0.0bp
        85.3%
        0.1
        265_S52_L001_R1_001_trim
        0.0bp
        75.1%
        0.1
        267_S64_L001_R1_001_trim
        0.0bp
        2.4%
        0.0
        269_S88_L001_R1_001_trim
        0.0bp
        1.6%
        0.0
        274_S17_L001_R1_001_trim
        0.0bp
        17.3%
        0.0
        276_S41_L001_R1_001_trim
        0.0bp
        43.1%
        0.0
        278_S93_L001_R1_001_trim
        0.0bp
        84.9%
        0.1
        286_S75_L001_R1_001_trim
        0.0bp
        2.0%
        0.0
        287_S87_L001_R1_001_trim
        0.0bp
        22.8%
        0.0
        54_S7_L001_R1_001_trim
        0.0bp
        65.8%
        0.1
        58_S19_L001_R1_001_trim
        303.0bp
        69.9%
        0.1
        AKAL9_S37_L001_R1_001_trim
        461.0bp
        17.4%
        0.1
        AKDL5_S15_L001_R1_001_trim
        447.0bp
        85.0%
        0.1
        AKFL10_S7_L001_R1_001_trim
        0.0bp
        88.6%
        0.3
        BBDL4_S61_L001_R1_001_trim
        0.0bp
        10.4%
        0.0
        BBFL4_S64_L001_R1_001_trim
        0.0bp
        39.6%
        0.3
        BCAL4_S47_L001_R1_001_trim
        0.0bp
        31.8%
        0.1
        BCEL5_S31_L001_R1_001_trim
        0.0bp
        44.4%
        0.1
        BCQL3_S45_L001_R1_001_trim
        0.0bp
        11.9%
        0.0
        CB24_S23_L001_R1_001_trim
        0.0bp
        89.6%
        0.2
        CB26_S39_L001_R1_001_trim
        0.0bp
        87.8%
        0.2
        CB39_S56_L001_R1_001_trim
        0.0bp
        88.8%
        0.5
        LA100_S25_L001_R1_001_trim
        0.0bp
        10.5%
        0.0
        LA101_S37_L001_R1_001_trim
        0.0bp
        66.9%
        0.0
        LA102_S49_L001_R1_001_trim
        0.0bp
        86.9%
        0.1
        LA103_S61_L001_R1_001_trim
        0.0bp
        79.2%
        0.1
        LA104_S73_L001_R1_001_trim
        0.0bp
        73.3%
        0.0
        LA105_S85_L001_R1_001_trim
        0.0bp
        70.4%
        0.0
        LA106_S2_L001_R1_001_trim
        0.0bp
        23.8%
        0.0
        LA108_S14_L001_R1_001_trim
        0.0bp
        50.3%
        0.1
        LA110_S26_L001_R1_001_trim
        0.0bp
        80.6%
        0.1
        LA114_S38_L001_R1_001_trim
        0.0bp
        2.3%
        0.0
        LA115_S50_L001_R1_001_trim
        0.0bp
        2.1%
        0.0
        LA116_S62_L001_R1_001_trim
        0.0bp
        2.2%
        0.0
        LA118_S74_L001_R1_001_trim
        0.0bp
        2.3%
        0.0
        LA121_S86_L001_R1_001_trim
        0.0bp
        53.1%
        0.0
        LA122_S3_L001_R1_001_trim
        0.0bp
        48.7%
        0.0
        LA123_S15_L001_R1_001_trim
        0.0bp
        62.7%
        0.0
        LA124_S27_L001_R1_001_trim
        0.0bp
        25.9%
        0.0
        LA125_S39_L001_R1_001_trim
        0.0bp
        59.6%
        0.1
        LA126_S51_L001_R1_001_trim
        0.0bp
        41.5%
        0.0
        LA127_S63_L001_R1_001_trim
        0.0bp
        6.1%
        0.0
        LA128_S75_L001_R1_001_trim
        0.0bp
        4.5%
        0.0
        LA129_S87_L001_R1_001_trim
        0.0bp
        74.3%
        0.1
        LA130_S4_L001_R1_001_trim
        0.0bp
        2.7%
        0.0
        LA132_S16_L001_R1_001_trim
        421.0bp
        18.0%
        0.0
        LA137_S28_L001_R1_001_trim
        0.0bp
        81.2%
        0.1
        LA138_S40_L001_R1_001_trim
        0.0bp
        1.8%
        0.0
        LA141_S52_L001_R1_001_trim
        0.0bp
        2.4%
        0.0
        LA142_S64_L001_R1_001_trim
        0.0bp
        1.9%
        0.0
        LA143_S76_L001_R1_001_trim
        0.0bp
        2.0%
        0.0
        LA145_S88_L001_R1_001_trim
        0.0bp
        77.4%
        0.1
        LA146_S5_L001_R1_001_trim
        0.0bp
        1.7%
        0.0
        LA147_S17_L001_R1_001_trim
        223.0bp
        3.9%
        0.0
        LA148_S29_L001_R1_001_trim
        0.0bp
        2.4%
        0.0
        LA149_S41_L001_R1_001_trim
        0.0bp
        1.9%
        0.0
        LA150_S53_L001_R1_001_trim
        0.0bp
        1.7%
        0.0
        LA151_S65_L001_R1_001_trim
        0.0bp
        1.7%
        0.0
        LA153_S77_L001_R1_001_trim
        0.0bp
        76.9%
        0.0
        LA161_S89_L001_R1_001_trim
        0.0bp
        41.2%
        0.0
        LA162_S6_L001_R1_001_trim
        0.0bp
        85.4%
        0.1
        LA163_S18_L001_R1_001_trim
        0.0bp
        81.4%
        0.1
        LA164_S30_L001_R1_001_trim
        0.0bp
        2.9%
        0.0
        LA165_S42_L001_R1_001_trim
        0.0bp
        80.7%
        0.1
        LA166_S54_L001_R1_001_trim
        0.0bp
        93.9%
        0.1
        LA167_S66_L001_R1_001_trim
        0.0bp
        91.4%
        0.1
        LA168_S78_L001_R1_001_trim
        0.0bp
        72.2%
        0.1
        LA169_S90_L001_R1_001_trim
        421.0bp
        51.7%
        0.0
        LA170_S7_L001_R1_001_trim
        0.0bp
        1.4%
        0.0
        LA171_S19_L001_R1_001_trim
        0.0bp
        2.1%
        0.0
        LA172_S31_L001_R1_001_trim
        0.0bp
        7.3%
        0.0
        LA173_S43_L001_R1_001_trim
        0.0bp
        3.0%
        0.0
        LA175_S55_L001_R1_001_trim
        0.0bp
        4.1%
        0.0
        LA177_S67_L001_R1_001_trim
        0.0bp
        46.2%
        0.0
        LA179_S79_L001_R1_001_trim
        0.0bp
        75.4%
        0.0
        LA180_S91_L001_R1_001_trim
        0.0bp
        57.8%
        0.0
        LA182_S8_L001_R1_001_trim
        0.0bp
        90.9%
        0.1
        LA183_S20_L001_R1_001_trim
        0.0bp
        86.8%
        0.1
        LA184_S32_L001_R1_001_trim
        0.0bp
        82.2%
        0.0
        LA185_S44_L001_R1_001_trim
        0.0bp
        84.9%
        0.0
        LA186_S56_L001_R1_001_trim
        0.0bp
        45.8%
        0.0
        LA187_S68_L001_R1_001_trim
        0.0bp
        49.5%
        0.0
        LA188_S80_L001_R1_001_trim
        0.0bp
        1.6%
        0.0
        LA22_S15_L001_R1_001_trim
        0.0bp
        6.7%
        0.0
        LA30_S78_L001_R1_001_trim
        0.0bp
        18.6%
        0.0
        LA31_S5_L001_R1_001_trim
        0.0bp
        91.6%
        0.1
        LA34_S16_L001_R1_001_trim
        0.0bp
        83.5%
        0.1
        LA38_S59_L001_R1_001_trim
        0.0bp
        1.4%
        0.0
        LA39_S69_L001_R1_001_trim
        0.0bp
        5.6%
        0.0
        LA40_S79_L001_R1_001_trim
        0.0bp
        2.6%
        0.0
        LA41_S6_L001_R1_001_trim
        0.0bp
        5.0%
        0.0
        LA45_S28_L001_R1_001_trim
        0.0bp
        91.5%
        0.1
        LA48_S60_L001_R1_001_trim
        0.0bp
        33.0%
        0.0
        LA62_S81_L001_R1_001_trim
        0.0bp
        2.9%
        0.0
        LA63_S8_L001_R1_001_trim
        0.0bp
        4.5%
        0.0
        LA64_S19_L001_R1_001_trim
        0.0bp
        44.6%
        0.1
        LA66_S41_L001_R1_001_trim
        0.0bp
        12.3%
        0.0
        LA67_S52_L001_R1_001_trim
        0.0bp
        2.5%
        0.0
        LA6_S36_L001_R1_001_trim
        0.0bp
        7.5%
        0.0
        LA7_S47_L001_R1_001_trim
        0.0bp
        7.4%
        0.0
        LA80_S42_L001_R1_001_trim
        0.0bp
        79.6%
        0.1
        LA82_S63_L001_R1_001_trim
        0.0bp
        2.4%
        0.0
        LA87_S32_L001_R1_001_trim
        0.0bp
        9.6%
        0.0
        LA89_S54_L001_R1_001_trim
        0.0bp
        12.0%
        0.0
        LA91_S74_L001_R1_001_trim
        0.0bp
        80.6%
        0.0
        LA94_S22_L001_R1_001_trim
        0.0bp
        91.7%
        0.1
        LA95_S33_L001_R1_001_trim
        0.0bp
        6.7%
        0.0
        LA96_S44_L001_R1_001_trim
        0.0bp
        10.5%
        0.0
        LA97_S1_L001_R1_001_trim
        0.0bp
        72.7%
        0.0
        LA98_S13_L001_R1_001_trim
        0.0bp
        42.3%
        0.0
        ORCL8_S16_L001_R1_001_trim
        0.0bp
        88.4%
        0.1
        ORCL9_S32_L001_R1_001_trim
        0.0bp
        88.8%
        0.2
        ORDL8_S24_L001_R1_001_trim
        0.0bp
        88.4%
        0.2
        SDAL17_S53_L001_R1_001_trim
        0.0bp
        9.7%
        0.0
        SDBL5_S40_L001_R1_001_trim
        0.0bp
        88.1%
        0.2
        SDCL10_S48_L001_R1_001_trim
        0.0bp
        86.6%
        0.3
        WAAL6_S63_L001_R1_001_trim
        0.0bp
        84.5%
        0.3
        WABL8_S55_L001_R1_001_trim
        0.0bp
        89.7%
        0.3
        WAFL8_S8_L001_R1_001_trim
        0.0bp
        16.2%
        0.0

        Kallisto

        Kallisto is a program for quantifying abundances of transcripts from RNA-Seq data.DOI: 10.1038/nbt.3519.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).

        MultiQC v1.12 - Written by Phil Ewels, available on GitHub.

        This report uses HighCharts, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.