Sample total_reads pseudoaligned_reads not_pseudoaligned_reads percent_aligned fragment_length 139_S91_L001_R1_001_trim 227076.0 143673.0 83403.0 63.2708872800296 171.8 155_S44_L001_R1_001_trim 217238.0 42825.0 174413.0 19.713401891013543 172.0 176_S80_L001_R1_001_trim 103185.0 42862.0 60323.0 41.53898337936715 172.0 195_S1_L001_R1_001_trim 48951.0 5835.0 43116.0 11.920083348654776 0.0 210_S85_L001_R1_001_trim 47258.0 35709.0 11549.0 75.56180964069576 0.0 212_S6_L001_R1_001_trim 101963.0 84916.0 17047.0 83.28119023567373 0.0 216_S42_L001_R1_001_trim 134974.0 95791.0 39183.0 70.96996458577208 0.0 221_S26_L001_R1_001_trim 71502.0 58455.0 13047.0 81.75295795921792 0.0 228_S9_L001_R1_001_trim 96680.0 13323.0 83357.0 13.780513032685146 0.0 239_S74_L001_R1_001_trim 108679.0 6110.0 102569.0 5.6220612997911275 0.0 242_S21_L001_R1_001_trim 169081.0 73521.0 95560.0 43.48270947060876 172.0 244_S45_L001_R1_001_trim 109762.0 77424.0 32338.0 70.53807328583663 172.0 247_S86_L001_R1_001_trim 53423.0 35860.0 17563.0 67.12464668775621 0.0 258_S81_L001_R1_001_trim 196829.0 48120.0 148709.0 24.447616967011975 172.0 259_S51_L001_R1_001_trim 111902.0 95472.0 16430.0 85.31750996407571 0.0 265_S52_L001_R1_001_trim 81387.0 61162.0 20225.0 75.14959391549019 0.0 267_S64_L001_R1_001_trim 136200.0 3267.0 132933.0 2.398678414096916 0.0 269_S88_L001_R1_001_trim 240866.0 3849.0 237017.0 1.597983941278553 0.0 274_S17_L001_R1_001_trim 100603.0 17405.0 83198.0 17.300676918183356 0.0 276_S41_L001_R1_001_trim 69759.0 30095.0 39664.0 43.141386774466376 0.0 278_S93_L001_R1_001_trim 99355.0 84335.0 15020.0 84.8824920738765 0.0 286_S75_L001_R1_001_trim 125803.0 2568.0 123235.0 2.0412867737653313 0.0 287_S87_L001_R1_001_trim 141070.0 32178.0 108892.0 22.80995250584816 0.0 54_S7_L001_R1_001_trim 99914.0 65706.0 34208.0 65.76255579798627 0.0 58_S19_L001_R1_001_trim 95248.0 66589.0 28659.0 69.9111792373593 303.0 AKAL9_S37_L001_R1_001_trim 556110.0 96993.0 459117.0 17.441333549117978 461.0 AKDL5_S15_L001_R1_001_trim 157975.0 134279.0 23696.0 85.00015825288811 447.0 AKFL10_S7_L001_R1_001_trim 297379.0 263479.0 33900.0 88.60040554309484 0.0 BBDL4_S61_L001_R1_001_trim 190916.0 19821.0 171095.0 10.382052839992458 0.0 BBFL4_S64_L001_R1_001_trim 696930.0 276198.0 420732.0 39.63066592053721 0.0 BCAL4_S47_L001_R1_001_trim 419146.0 133431.0 285715.0 31.83401487787072 0.0 BCEL5_S31_L001_R1_001_trim 336766.0 149494.0 187272.0 44.391060855312 0.0 BCQL3_S45_L001_R1_001_trim 290432.0 34480.0 255952.0 11.871970030850596 0.0 CB24_S23_L001_R1_001_trim 243772.0 218453.0 25319.0 89.61365538289877 0.0 CB26_S39_L001_R1_001_trim 216558.0 190080.0 26478.0 87.77325243121935 0.0 CB39_S56_L001_R1_001_trim 611915.0 543535.0 68380.0 88.82524533636207 0.0 LA100_S25_L001_R1_001_trim 96888.0 10148.0 86740.0 10.473949302287176 0.0 LA101_S37_L001_R1_001_trim 71176.0 47629.0 23547.0 66.91721928740024 0.0 LA102_S49_L001_R1_001_trim 92485.0 80390.0 12095.0 86.92220360058388 0.0 LA103_S61_L001_R1_001_trim 76274.0 60426.0 15848.0 79.2222775782049 0.0 LA104_S73_L001_R1_001_trim 57959.0 42512.0 15447.0 73.3484014562018 0.0 LA105_S85_L001_R1_001_trim 52695.0 37071.0 15624.0 70.35012809564475 0.0 LA106_S2_L001_R1_001_trim 178768.0 42608.0 136160.0 23.83424326501387 0.0 LA108_S14_L001_R1_001_trim 119235.0 59997.0 59238.0 50.318279028808654 0.0 LA110_S26_L001_R1_001_trim 83914.0 67600.0 16314.0 80.5586672069023 0.0 LA114_S38_L001_R1_001_trim 152206.0 3537.0 148669.0 2.323824290763833 0.0 LA115_S50_L001_R1_001_trim 46508.0 956.0 45552.0 2.0555603337060293 0.0 LA116_S62_L001_R1_001_trim 132936.0 2942.0 129994.0 2.2130950231690436 0.0 LA118_S74_L001_R1_001_trim 14589.0 342.0 14247.0 2.344231955582974 0.0 LA121_S86_L001_R1_001_trim 52581.0 27922.0 24659.0 53.10283182138035 0.0 LA122_S3_L001_R1_001_trim 85603.0 41685.0 43918.0 48.69572328072614 0.0 LA123_S15_L001_R1_001_trim 63867.0 40029.0 23838.0 62.67556014843346 0.0 LA124_S27_L001_R1_001_trim 104932.0 27130.0 77802.0 25.854839324514924 0.0 LA125_S39_L001_R1_001_trim 92254.0 55010.0 37244.0 59.62885078153792 0.0 LA126_S51_L001_R1_001_trim 61677.0 25606.0 36071.0 41.516286460106684 0.0 LA127_S63_L001_R1_001_trim 93877.0 5738.0 88139.0 6.112253267573528 0.0 LA128_S75_L001_R1_001_trim 43190.0 1950.0 41240.0 4.514934012502894 0.0 LA129_S87_L001_R1_001_trim 88909.0 66085.0 22824.0 74.32880810716576 0.0 LA130_S4_L001_R1_001_trim 11418.0 308.0 11110.0 2.697495183044316 0.0 LA132_S16_L001_R1_001_trim 50567.0 9117.0 41450.0 18.029544960151878 421.04 LA137_S28_L001_R1_001_trim 84892.0 68968.0 15924.0 81.24204872072751 0.0 LA138_S40_L001_R1_001_trim 93039.0 1720.0 91319.0 1.8486871097066822 0.0 LA141_S52_L001_R1_001_trim 120018.0 2909.0 117109.0 2.4238030962022363 0.0 LA142_S64_L001_R1_001_trim 70026.0 1341.0 68685.0 1.915002998886128 0.0 LA143_S76_L001_R1_001_trim 79190.0 1594.0 77596.0 2.0128804141937113 0.0 LA145_S88_L001_R1_001_trim 112033.0 86659.0 25374.0 77.35131613006881 0.0 LA146_S5_L001_R1_001_trim 78653.0 1349.0 77304.0 1.7151284757097631 0.0 LA147_S17_L001_R1_001_trim 121498.0 4687.0 116811.0 3.8576766695748077 223.0 LA148_S29_L001_R1_001_trim 76740.0 1855.0 74885.0 2.417253062288246 0.0 LA149_S41_L001_R1_001_trim 62182.0 1194.0 60988.0 1.9201698240648417 0.0 LA150_S53_L001_R1_001_trim 116.0 2.0 114.0 1.7241379310344827 0.0 LA151_S65_L001_R1_001_trim 65694.0 1129.0 64565.0 1.718573994580936 0.0 LA153_S77_L001_R1_001_trim 62898.0 48371.0 14527.0 76.90387611688766 0.0 LA161_S89_L001_R1_001_trim 78255.0 32248.0 46007.0 41.208868442911 0.0 LA162_S6_L001_R1_001_trim 85839.0 73316.0 12523.0 85.41106024068313 0.0 LA163_S18_L001_R1_001_trim 86721.0 70576.0 16145.0 81.38282538254863 0.0 LA164_S30_L001_R1_001_trim 129491.0 3792.0 125699.0 2.9283888455568343 0.0 LA165_S42_L001_R1_001_trim 75210.0 60716.0 14494.0 80.72862651243186 0.0 LA166_S54_L001_R1_001_trim 66683.0 62624.0 4059.0 93.91299131712731 0.0 LA167_S66_L001_R1_001_trim 91642.0 83717.0 7925.0 91.35221841513716 0.0 LA168_S78_L001_R1_001_trim 91575.0 66084.0 25491.0 72.16380016380016 0.0 LA169_S90_L001_R1_001_trim 95330.0 49284.0 46046.0 51.69831112975978 421.0 LA170_S7_L001_R1_001_trim 115160.0 1641.0 113519.0 1.4249739492879472 0.0 LA171_S19_L001_R1_001_trim 70768.0 1496.0 69272.0 2.113949807822745 0.0 LA172_S31_L001_R1_001_trim 52556.0 3826.0 48730.0 7.279853870157546 0.0 LA173_S43_L001_R1_001_trim 70933.0 2115.0 68818.0 2.981686944017594 0.0 LA175_S55_L001_R1_001_trim 41328.0 1711.0 39617.0 4.14005032907472 0.0 LA177_S67_L001_R1_001_trim 86728.0 40047.0 46681.0 46.17539894843649 0.0 LA179_S79_L001_R1_001_trim 49378.0 37230.0 12148.0 75.39795050427315 0.0 LA180_S91_L001_R1_001_trim 79636.0 46035.0 33601.0 57.80677080717263 0.0 LA182_S8_L001_R1_001_trim 74669.0 67868.0 6801.0 90.8918024883151 0.0 LA183_S20_L001_R1_001_trim 74316.0 64520.0 9796.0 86.81845093923248 0.0 LA184_S32_L001_R1_001_trim 54064.0 44415.0 9649.0 82.15263391535957 0.0 LA185_S44_L001_R1_001_trim 46575.0 39539.0 7036.0 84.89318303811058 0.0 LA186_S56_L001_R1_001_trim 55619.0 25471.0 30148.0 45.79550153724446 0.0 LA187_S68_L001_R1_001_trim 29357.0 14546.0 14811.0 49.54865960418299 0.0 LA188_S80_L001_R1_001_trim 46513.0 761.0 45752.0 1.6361017349988176 0.0 LA22_S15_L001_R1_001_trim 212507.0 14165.0 198342.0 6.665662778167307 0.0 LA30_S78_L001_R1_001_trim 102048.0 18981.0 83067.0 18.60007055503293 0.0 LA31_S5_L001_R1_001_trim 129507.0 118687.0 10820.0 91.64523925347665 0.0 LA34_S16_L001_R1_001_trim 126444.0 105531.0 20913.0 83.46066242763595 0.0 LA38_S59_L001_R1_001_trim 195344.0 2699.0 192645.0 1.381665165042182 0.0 LA39_S69_L001_R1_001_trim 157254.0 8864.0 148390.0 5.6367405598585725 0.0 LA40_S79_L001_R1_001_trim 100131.0 2621.0 97510.0 2.617570982013562 0.0 LA41_S6_L001_R1_001_trim 115415.0 5774.0 109641.0 5.002815925139713 0.0 LA45_S28_L001_R1_001_trim 145230.0 132848.0 12382.0 91.47421331680782 0.0 LA48_S60_L001_R1_001_trim 108668.0 35845.0 72823.0 32.98579158537932 0.0 LA62_S81_L001_R1_001_trim 232524.0 6790.0 225734.0 2.9201286748894737 0.0 LA63_S8_L001_R1_001_trim 173574.0 7850.0 165724.0 4.522566743867169 0.0 LA64_S19_L001_R1_001_trim 189792.0 84627.0 105165.0 44.58933990895296 0.0 LA66_S41_L001_R1_001_trim 101622.0 12532.0 89090.0 12.331975359666213 0.0 LA67_S52_L001_R1_001_trim 151659.0 3764.0 147895.0 2.481883699615585 0.0 LA6_S36_L001_R1_001_trim 75638.0 5707.0 69931.0 7.545149263597663 0.0 LA7_S47_L001_R1_001_trim 103193.0 7653.0 95540.0 7.416200711288557 0.0 LA80_S42_L001_R1_001_trim 97539.0 77624.0 19915.0 79.58252596397338 0.0 LA82_S63_L001_R1_001_trim 159052.0 3788.0 155264.0 2.381611045444257 0.0 LA87_S32_L001_R1_001_trim 45740.0 4396.0 41344.0 9.610843900306078 0.0 LA89_S54_L001_R1_001_trim 203883.0 24509.0 179374.0 12.021110146505594 0.0 LA91_S74_L001_R1_001_trim 56087.0 45219.0 10868.0 80.62296075739475 0.0 LA94_S22_L001_R1_001_trim 82259.0 75423.0 6836.0 91.68966313716432 0.0 LA95_S33_L001_R1_001_trim 52144.0 3493.0 48651.0 6.698757287511508 0.0 LA96_S44_L001_R1_001_trim 71287.0 7496.0 63791.0 10.515241208074404 0.0 LA97_S1_L001_R1_001_trim 47156.0 34304.0 12852.0 72.74577996437357 0.0 LA98_S13_L001_R1_001_trim 62621.0 26487.0 36134.0 42.29731240318743 0.0 ORCL8_S16_L001_R1_001_trim 70861.0 62633.0 8228.0 88.38853530150577 0.0 ORCL9_S32_L001_R1_001_trim 192370.0 170739.0 21631.0 88.75552321047981 0.0 ORDL8_S24_L001_R1_001_trim 178681.0 157998.0 20683.0 88.42462265154101 0.0 SDAL17_S53_L001_R1_001_trim 504520.0 48815.0 455705.0 9.675533180052327 0.0 SDBL5_S40_L001_R1_001_trim 219876.0 193788.0 26088.0 88.13513071003656 0.0 SDCL10_S48_L001_R1_001_trim 360278.0 312000.0 48278.0 86.59979238254904 0.0 WAAL6_S63_L001_R1_001_trim 356259.0 301035.0 55224.0 84.49891792207355 0.0 WABL8_S55_L001_R1_001_trim 357082.0 320176.0 36906.0 89.66455884082649 0.0 WAFL8_S8_L001_R1_001_trim 163981.0 26576.0 137405.0 16.20675566071679 0.0