FastQCFastQC Report
Tue 9 Apr 2024
3291_5903_10011_H94MGADXX_HK_CF35_ACAGTG_R1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename3291_5903_10011_H94MGADXX_HK_CF35_ACAGTG_R1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87027784
Total Bases8.7 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGTTCACTTTTCTTCCCCAATTCGAGGCTCTACACGCAAATGGCTG1271630.14611770420352194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)