Index of /seashell/bu-github/deep-dive-expression/M-multi-species/output/01.5-lncRNA

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory   -  
[TXT]*.bam 2025-02-22 09:48 0  
[ ]*.gtf 2025-02-22 13:08 186  
[ ]*.sorted.bam 2025-02-22 09:48 92  
[ ]*.sorted.bam.bai 2025-02-22 09:48 16  
[ ]RNA-POC-47-S1-TP2.bam 2025-02-23 12:28 8.4G 
[ ]RNA-POC-47-S1-TP2.gtf 2025-02-23 13:20 61M 
[ ]RNA-POC-47-S1-TP2.so..>2025-02-23 12:32 4.8G 
[ ]RNA-POC-47-S1-TP2.so..>2025-02-23 12:33 819K 
[ ]RNA-POC-48-S1-TP2.bam 2025-02-23 12:38 7.9G 
[ ]RNA-POC-48-S1-TP2.gtf 2025-02-23 13:17 63M 
[ ]RNA-POC-48-S1-TP2.so..>2025-02-23 12:43 4.7G 
[ ]RNA-POC-48-S1-TP2.so..>2025-02-23 12:43 824K 
[ ]RNA-POC-50-S1-TP2.bam 2025-02-23 12:49 8.6G 
[ ]RNA-POC-50-S1-TP2.gtf 2025-02-23 13:22 68M 
[ ]RNA-POC-50-S1-TP2.so..>2025-02-23 12:53 4.8G 
[ ]RNA-POC-50-S1-TP2.so..>2025-02-23 12:54 928K 
[ ]RNA-POC-53-S1-TP2.bam 2025-02-23 12:59 8.2G 
[ ]RNA-POC-53-S1-TP2.gtf 2025-02-23 13:15 69M 
[ ]RNA-POC-53-S1-TP2.so..>2025-02-23 13:04 4.6G 
[ ]RNA-POC-53-S1-TP2.so..>2025-02-23 13:04 940K 
[ ]RNA-POC-57-S1-TP2.bam 2025-02-23 13:08 6.2G 
[ ]RNA-POC-57-S1-TP2.gtf 2025-02-23 13:12 49M 
[ ]RNA-POC-57-S1-TP2.so..>2025-02-23 13:10 3.8G 
[ ]RNA-POC-57-S1-TP2.so..>2025-02-23 13:11 719K 
[TXT]align_reads.done 2025-02-23 12:22 0  
[TXT]bedtools_done.done 2025-02-23 19:25 0  
[TXT]convert_gtf.done 2025-02-23 19:25 0  
[TXT]cpc2.done 2025-02-23 19:25 0  
[TXT]exon.txt 2025-02-23 10:44 11M 
[TXT]filter_gtf.done 2025-02-23 19:25 0  
[TXT]filter_noncoding.done 2025-02-23 19:25 0  
[VID]genome.index.1.ht2 2025-02-23 10:48 227M 
[VID]genome.index.2.ht2 2025-02-23 10:48 90M 
[VID]genome.index.3.ht2 2025-02-23 10:44 1.9K 
[ ]genome.index.4.ht2 2025-02-23 10:44 90M 
[VID]genome.index.5.ht2 2025-02-23 10:49 245M 
[VID]genome.index.6.ht2 2025-02-23 10:49 92M 
[VID]genome.index.7.ht2 2025-02-23 10:44 7.3M 
[VID]genome.index.8.ht2 2025-02-23 10:44 1.5M 
[TXT]gffcompare.done 2025-02-23 19:16 0  
[ ]gffcompare_merged.an..>2025-02-23 19:16 100M 
[ ]gffcompare_merged.loci 2025-02-23 19:16 8.4M 
[ ]gffcompare_merged.stats2025-02-23 19:16 1.4K 
[ ]gffcompare_merged.st..>2025-02-23 19:16 5.2M 
[ ]gffcompare_merged.st..>2025-02-23 19:16 14M 
[ ]gffcompare_merged.tr..>2025-02-23 19:16 14M 
[TXT]hisat2-build_stats.txt 2025-02-23 10:49 15K 
[TXT]hisat_index.done 2025-02-23 10:49 0  
[TXT]lncRNA.fasta 2025-02-22 13:18 0  
[TXT]lncRNA.gtf 2025-02-23 19:25 0  
[ ]lncRNA_candidates.fasta2025-02-23 19:25 147M 
[ ]lncRNA_candidates.gtf 2025-02-23 19:25 4.1M 
[TXT]merge_gtf.done 2025-02-23 13:23 0  
[TXT]noncoding_transcript..>2025-02-23 19:25 0  
[TXT]sam_to_bam.done 2025-02-23 13:11 0  
[TXT]splice_sites.txt 2025-02-23 10:44 9.6M 
[TXT]stringtie_assembly.done2025-02-23 13:22 0  
[ ]stringtie_merged.gtf 2025-02-23 13:23 102M 
[TXT]subset_fasta.done 2025-02-23 13:23 0  
[TXT]summary.done 2025-02-23 13:23 0  
[TXT]validate.done 2025-02-23 10:44 0