Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/F-Ptuh/data/Pocillopora_meandrina_HIv1.assembly.fa Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/F-Ptuh/output/05-Ptuh-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam Location: Pocillopora_meandrina_HIv1___Sc0000017:5050908-5051000 minus PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/F-Ptuh/output/05-Ptuh-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_4572.ps.pdf Locus Name: Cluster_4572 AGGAGAAGUUAGAUGGAAUCAACUGCUGAGAUUCUAUGGAUUUAAUUUAAAUCCAUAGAACUUCUGCAUUUGAUUCCAAAUAACUCUAACCAU .(((((.((((..(((((((((.(((.(((.(((((((((((((...))))))))))))).))).))).)))))))))..)))))))..)).. (-40.60) AGGAGAAGUUAGAUGGAAUC......................................................................... len:20 al:1 .................AUCAACUGCUGAGAUUCUAUGGAUU................................................... len:25 al:2 ..................aCAACUGCUGAGAUUCUAUGG...................................................... len:21 al:2 ..................UCAACUGCUGAGAUUCUAUG....................................................... len:20 al:1 ..................UCAACUGCUGAGAUUCUAUGGAcUU.................................................. len:25 al:1 ..................UCAACUGCUGAGAUUCUAUGGAUUU.................................................. len:25 al:5 ..................UCAACUaCUGAGAUUCUAUGGAUUU.................................................. len:25 al:1 ..................UCAACUGCUGAGAUUCUAU........................................................ len:19 al:1 ..................UCAACUGCUGAGAUUCUAUGGAUUc.................................................. len:25 al:1 ...................CgACUGCUGAGAUUCUAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAUGGAUUc.................................................. len:24 al:19 ...................CAACUGCUGAGAUUCUAUG....................................................... len:19 al:3 ...................CAACUGCUGAGAUUCUAUGGAaUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAUGGAUU................................................... len:23 al:20 ...................CAACUGCUGAGAUUCUAUGa...................................................... len:20 al:4 ...................uAACUGCUGAGAUUCUAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAUGGAUUUc................................................. len:25 al:1 ...................CAACUGCUGAGAUUCUAUGG...................................................... len:20 al:4 ...................CAACUGCUGAGAUUCUAUGGAUUa.................................................. len:24 al:5 ...................CAACUGCUGAGAUUCUgUGGAUUUA................................................. len:25 al:1 ...................CAACUGCUGAGAUUCUAUGGAU.................................................... len:22 al:2 ...................CAACUGCaGAGAUUCUAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAUGGAUUU.................................................. len:24 al:103 ...................CAACUGCUGAGAUUCUAUGGAUgU.................................................. len:24 al:6 ...................CAACUGCUGgGAUUCUAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAUGGAUc................................................... len:23 al:1 ...................CAACUGCUGAGAUcCUAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAUa....................................................... len:19 al:1 ...................CAACUGCUGAGAUUCUAUGGAUUUA................................................. len:25 al:1 ...................CAACUGCUGAGAUUCUAUGGAgU................................................... len:23 al:1 ...................CAACUGCUGAGAUUCUAUGGAUaU.................................................. len:24 al:7 ...................CAACUGCUGAGAUUCUAUGGgUU................................................... len:23 al:2 ...................CAACUGCUGAGAUUCUAUGGAUUUu................................................. len:25 al:3 ...................CAACUGCUGAGAUUCUAUGGAcUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCcAUGGAUUU.................................................. len:24 al:1 ....................AAuUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:43 ....................AACUuCUGAGAUUCUAUGGAUU................................................... len:22 al:10 ....................AACUGCUGAaAUUCUAUGGAUUU.................................................. len:23 al:12 ....................AACUaCUGAGAUUCUAUGGAUUU.................................................. len:23 al:40 ....................uACUGCUGAGAUUCUAUGG...................................................... len:19 al:10 ....................AACUGCUGAGAUUCUAUGGgU.................................................... len:21 al:15 ....................AACUGCUGAGAUcCUAUG....................................................... len:18 al:2 ....................AACUGCUGAGAUUCUAaGGAUUU.................................................. len:23 al:11 ....................AACUcCUGAGAUUCUAUGGAUUU.................................................. len:23 al:1 ....................AACUGCUGAGAUUCUAUGGAUUUuAU............................................... len:26 al:3 ....................AACaGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:15 ....................AACUGCUGAGAUUCUAUGGAa.................................................... len:21 al:34 ....................AACUGCUGAGAUUCUAUGGA..................................................... len:20 al:210 ....................AACUGCUGcGAUUCUAUGGAUU................................................... len:22 al:2 ....................AACgGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:6 ....................AACUGCcGAGAUUCUAUGGAUU................................................... len:22 al:22 ....................AACUGCUGAGAUUCUAUaGAU.................................................... len:21 al:3 ....................uACUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:144 ....................AACUGCUGAGAUUCUAUGGAcUU.................................................. len:23 al:74 ....................AACUGCUGuGAUUCUAUGGAUU................................................... len:22 al:2 ....................AACUGCUGAGuUUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUUaUAUGGAUU................................................... len:22 al:2 ....................AgCUGCUGAGAUUCUAUGG...................................................... len:19 al:16 ....................AACUGCUGAGuUUCUAUGGAUUU.................................................. len:23 al:1 ....................AACcGCUGAGAUUCUAUGGA..................................................... len:20 al:1 ....................AACUGCUGAGAUUCUAUGGAUUUg................................................. len:24 al:22 ....................AACUGCUGAGAUUCUAUGGcUU................................................... len:22 al:118 ....................AACUGCUGAGAUUCcAUGGAUUU.................................................. len:23 al:95 ....................AACUGCUGAGAUUCUAUGa...................................................... len:19 al:948 ....................AACUGCUGAGAUUCgAUGGAUU................................................... len:22 al:1 ....................AACUGCUGAGAUUCUAUaGAUUUA................................................. len:24 al:1 ....................AACUGCgGAGAUUCUAUGGAUUUA................................................. len:24 al:1 ....................AACUGCUaAGAUUCUAUGGAUUU.................................................. len:23 al:25 ....................AACUGCUGgGAUUCUAUGGAUUUA................................................. len:24 al:3 ....................cACUGCUGAGAUUCUAUGGA..................................................... len:20 al:2 ....................uACUGCUGAGAUUCUAUG....................................................... len:18 al:1 ....................AACUGCUGAGAgUCUAU........................................................ len:17 al:3 ....................AACUGCUGAGAUUCUAUGGAUc................................................... len:22 al:1446 ....................AAaUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:1 ....................AACUGCUGAGAUUCUAUGGAgU................................................... len:22 al:152 ....................AACUGCUGAGAUUCUAUGGAUgU.................................................. len:23 al:863 ....................AACUGCUGAGAUUCUAUGGgUUUA................................................. len:24 al:6 ....................AACUGCUGAGAUUCUAUGGAgUU.................................................. len:23 al:22 ....................AACUGCUGAGAUUCUAUGGAUUUu................................................. len:24 al:741 ....................AACUGCUGAGAUUuUAUGGAUU................................................... len:22 al:9 ....................AuCUGCUGAGAUUCUAUGG...................................................... len:19 al:4 ....................AACUGCUGAGAUUCUAUGGAUcU.................................................. len:23 al:164 ....................AACUGCUGAGAUUCUAUGGAUUUAg................................................ len:25 al:5 ....................AACUGuUGAGAUUCUAUGGAUU................................................... len:22 al:9 ....................AACUGCaGAGAUUCUAUGGAUUU.................................................. len:23 al:37 ....................AACUGCaGAGAUUCUAUGGAUU................................................... len:22 al:4 ....................AACUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:47680 ....................AACUGCUGAuAUUCUAUGGAUUU.................................................. len:23 al:1 ....................AACUGCUGAGAUUCUAUGGAg.................................................... len:21 al:39 ....................AACUGCUGAGAUUCcAUGG...................................................... len:19 al:5 ....................AgCUGCUGAGAUUCUAUG....................................................... len:18 al:3 ....................AACUGCUGAGAUUuUAUGGAUUU.................................................. len:23 al:89 ....................AACaGCUGAGAUUCUAUGG...................................................... len:19 al:1 ....................AACUGCUGcGAUUCUAUGGAUUU.................................................. len:23 al:11 ....................AACUGCUGAGAcUCUAUGGAUUUA................................................. len:24 al:1 ....................AACUGCUaAGAUUCUAUGGAUU................................................... len:22 al:1 ....................AACUGCUGAGAUUCgAUGGAUUU.................................................. len:23 al:2 ....................AACUGCUGAGAcUCUAUGG...................................................... len:19 al:10 ....................AACUuCUGAGAUUCUAUGGAUUU.................................................. len:23 al:110 ....................AACUGCUGAGAUUCUAUuGAUUU.................................................. len:23 al:8 ....................AACUGCUGAGAUUCUgUGGAUUUA................................................. len:24 al:5 ....................AcCUGCUGAGAUUCUAUGG...................................................... len:19 al:4 ....................AACUGCUGAGAUUuUAUG....................................................... len:18 al:1 ....................AACUGCUGAGAgUCUAUGGAUU................................................... len:22 al:5 ....................AACUGCUGAGAUUCUAUGu...................................................... len:19 al:114 ....................AACUGCUGAGgUUCUAUGGAUUUA................................................. len:24 al:6 ....................AACUGCUuAGAUUCUAUGGAUUUA................................................. len:24 al:1 ....................AACUGCUGAGAUUCUAUaGAUUU.................................................. len:23 al:64 ....................AACUGCUGAGAaUCUAUGGAUUU.................................................. len:23 al:6 ....................AACUGCUGuGAUUCUAUG....................................................... len:18 al:1 ....................AACUGCUGAGAUUCUAUGGAUUUAAa............................................... len:26 al:1 ....................AACUGCUGAGAUUCUAUGGAUUUAuU............................................... len:26 al:17 ....................AACUGCUGAGAUUuUAUGG...................................................... len:19 al:8 ....................AACUGCUGAGAUUCUAUGGAUUc.................................................. len:23 al:8255 ....................AgCUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:5 ....................AACUGCUGAGAUUCUAUGGAUUUgAU............................................... len:26 al:1 ....................AACUGCUGAGAUUCUAUGcA..................................................... len:20 al:1 ....................AACUGuUGAGAUUCUAUGG...................................................... len:19 al:2 ....................AACUGCUGAGgUUCUAUGGAUUU.................................................. len:23 al:139 ....................AACUGCUGAGAUUCUAUGGcUUU.................................................. len:23 al:4 ....................AuCUGCUGAGAUUCUAUGGAU.................................................... len:21 al:1 ....................cACUGCUGAGAUUCUAUGGAUU................................................... len:22 al:88 ....................AgCUGCUGAGAUUCUAUGGAUU................................................... len:22 al:33 ....................AACUGCUGAGAUUCUAUu....................................................... len:18 al:2 ....................AACUGCUGAGAUUCUAUaGAUU................................................... len:22 al:3 ....................AACUaCUGAGAUUCUAUGG...................................................... len:19 al:2 ....................AACUGCUGuGAUUCUAUGG...................................................... len:19 al:1 ....................AACUGCUGAGAUcCUAUGG...................................................... len:19 al:2 ....................AACUGCUGuGAUUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUUCUAcGGAUUU.................................................. len:23 al:94 ....................AACUGCUGAGAUUCaAUGGAUUU.................................................. len:23 al:10 ....................AACUGCUGAaAUUCUAUGGAUU................................................... len:22 al:5 ....................AACUGCUGAGgUUCUAUGGAU.................................................... len:21 al:1 ....................AACcGCUGAGAUUCUAUGG...................................................... len:19 al:5 ....................AACUGCUGAaAUUCUAUGG...................................................... len:19 al:7 ....................AACUuCUGAGAUUCUAUGGAUUUAAU............................................... len:26 al:1 ....................AcCUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:161 ....................AACUGCUGAGAUUuUAUGGAUUUAA................................................ len:25 al:1 ....................AACUGCUGgGAUUCUAUGGAUU................................................... len:22 al:17 ....................AACUGCUGAGAUUCUAUGGAUU................................................... len:22 al:7515 ....................AACUGCUGAGAUUCUAUGGAcU................................................... len:22 al:61 ....................AACUGCUGAGAUUCUAcGGAU.................................................... len:21 al:4 ....................AACUGCUGAGAUUCUAUGGgUUU.................................................. len:23 al:153 ....................AACUGCUGAGgUUCUAUGG...................................................... len:19 al:6 ....................AACUGCUGAGAUcCUAUGGAUU................................................... len:22 al:17 ....................AACUGCUGAGAUUCUAUGGuUUU.................................................. len:23 al:13 ....................AgCUGCUGAGAUUCUAU........................................................ len:17 al:1 ....................AACcGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:124 ....................AACUGCUGAGAUUCUAUGGAUUcA................................................. len:24 al:2 ....................AACUGCUaAGAUUCUAUGG...................................................... len:19 al:1 ....................cACUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:9 ....................uACUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:3 ....................AACUGCUuAGAUUCUAUGGAUU................................................... len:22 al:1 ....................AACUGCUGAGAUUCUAUGGAUUUAc................................................ len:25 al:23 ....................AACUGCgGAGAUUCUAUGG...................................................... len:19 al:24 ....................AACUGCUGAGAUUuUAUGGA..................................................... len:20 al:1 ....................AACUGCUGAGAUUCUAUGGAUUg.................................................. len:23 al:839 ....................AACUGCUGAGAUUCUAUGGuU.................................................... len:21 al:1 ....................AACUGCUGAGAUUCUgUGGAUU................................................... len:22 al:19 ....................AAgUGCUGAGAUUCUAUGGAUU................................................... len:22 al:1 ....................AACaGCUGAGAUUCUAUGGAUU................................................... len:22 al:3 ....................AACUGCUGAGAUUCUgUGGAUUU.................................................. len:23 al:111 ....................AACcGCUGAGAUUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUUCUAUGGAUUaA................................................. len:24 al:4 ....................AgCUGCUGAGAUUCUAUGGAU.................................................... len:21 al:5 ....................AACUGCUGAGAUgCUAUGGAUUU.................................................. len:23 al:2 ....................gACUGCUGAGAUUCUAUGGAU.................................................... len:21 al:2 ....................cACUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:510 ....................AACUGCUGAGAUUCUAUGaAUU................................................... len:22 al:5 ....................AuCUGCUGAGAUUCUAUGGAUU................................................... len:22 al:5 ....................AACUGCUGAGAUUCUAgGGAUUU.................................................. len:23 al:5 ....................AACUGCUGAGAUaCUAUGG...................................................... len:19 al:1 ....................AACUGCUGAGAUUCaAUGG...................................................... len:19 al:1 ....................AACUGCUGAGAUUCUAcG....................................................... len:18 al:9 ....................AACUGCUGAGcUUCUAUGGAUUU.................................................. len:23 al:8 ....................AACUGCUGAGAUUCUAUGGAUUUuA................................................ len:25 al:17 ....................AACUGCUGAGAUUCUAUGGAUUUAAUU.............................................. len:27 al:5 ....................uACUGCUGAGAUUCUAUGGAUU................................................... len:22 al:14 ....................AACUGCUGAGAUUCUAUGc...................................................... len:19 al:36 ....................AACUGCUGAGAUUCUAUGGAUa................................................... len:22 al:391 ....................AACUGCUGAGAUUCUAUGGAUUa.................................................. len:23 al:2032 ....................AACUGCUcAGAUUCUAUGGAUUU.................................................. len:23 al:1 ....................AACUGCUGAGAUUCUgUGGAU.................................................... len:21 al:1 ....................AACUGCUuAGAUUCUAUGGAUUU.................................................. len:23 al:3 ....................AACUGCUGAGAUUCUAUGGg..................................................... len:20 al:22 ....................AACgGCUGAGAUUCUAUGGAUU................................................... len:22 al:2 ....................AACUGCUGAGAUUCcAUGGAUUUA................................................. len:24 al:2 ....................AACUGCUGAGAUUCUAUGGgUU................................................... len:22 al:24 ....................AACUGCUGAGAUUCUAUGGAgUUA................................................. len:24 al:1 ....................AACUGCUGAGAUUCUgUGGA..................................................... len:20 al:1 ....................gACUGCUGAGAUUCUAUGG...................................................... len:19 al:10 ....................AAaUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:3 ....................AACUGCcGAGAUUCUAUGGAUUU.................................................. len:23 al:129 ....................AACUGCUGuGAUUCUAUGGAUUU.................................................. len:23 al:21 ....................AACUGCUGAGAUUCaAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUUCUAUGGAaU................................................... len:22 al:60 ....................AACUGCUGAGgUUCUAUG....................................................... len:18 al:2 ....................cACUGCUGAGAUUCUAUGGAU.................................................... len:21 al:3 ....................AACcGCUGAGAUUCUAUG....................................................... len:18 al:1 ....................AACUGCUGAGAaUCUAUGG...................................................... len:19 al:1 ....................AACUuCUGAGAUUCUAUGG...................................................... len:19 al:3 ....................AACUGCUGAGAaUCUAUGGAUU................................................... len:22 al:1 ....................cACUGCUGAGAUUCUAUG....................................................... len:18 al:2 ....................AACUGCUGAGAUUCUAU........................................................ len:17 al:31 ....................AACUGCUGAGAUUCUAUGGAUaU.................................................. len:23 al:416 ....................AACUGCUGAGAUcCUAUGGAUUU.................................................. len:23 al:121 ....................AACUGCUGAGAUUCUAgGGAUU................................................... len:22 al:1 ....................AACUGCUGAGAUUCUAUGGAUUUAAaU.............................................. len:27 al:2 ....................AACUGCUGAGAUUCUAUcG...................................................... len:19 al:3 ....................AACUGCUGAGAUUaUAUGGAUUU.................................................. len:23 al:3 ....................AACUGCUGAGAUUCUAUGuAUUU.................................................. len:23 al:3 ....................AACUGCUGAGAUUCUAUGGAU.................................................... len:21 al:519 ....................AACUGCUGAGAUUCUAUGGAUUUc................................................. len:24 al:108 ....................AACUGCcGAGAUUCUAUGGAU.................................................... len:21 al:3 ....................AACUGCUGAGAUUCUAUuG...................................................... len:19 al:1 ....................AACUGCUGAGAcUCUAUGGAUUU.................................................. len:23 al:116 ....................AACUGCUGAGAUUCaAUGGAUU................................................... len:22 al:2 ....................AACUGCUGAGAUUCUAcGGAUU................................................... len:22 al:14 ....................AACUGCUGAGgUUCUAUGGAUU................................................... len:22 al:30 ....................AuCUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:40 ....................AACUGCUGAGAUUCUAUGcAUU................................................... len:22 al:1 ....................uACUGCUGAGAUUCUAUGGA..................................................... len:20 al:1 ....................AACUGCUGAGAUUCUAUGGAc.................................................... len:21 al:106 ....................AgCUGCUGAGAUUCUAUGGA..................................................... len:20 al:1 ....................AACUGCUGAGAUUCUAUGGAUUUAu................................................ len:25 al:90 ....................gACUGCUGAGAUUCUAUG....................................................... len:18 al:2 ....................AACUGCgGAGAUUCUAUGGAUUU.................................................. len:23 al:66 ....................AcCUGCUGAGAUUCUAUGGAU.................................................... len:21 al:1 ....................AACUaCUGAGAUUCUAUGGAUU................................................... len:22 al:9 ....................AACUGCUGAGAUUCUAUGGAUUUAAU............................................... len:26 al:26 ....................AACUGCgGAGAUUCUAUGGAU.................................................... len:21 al:19 ....................AACUGCUGAGAUUCUAUGGAaUU.................................................. len:23 al:13 ....................AACcGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:4 ....................AACUGCUGAGAcUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUUCUAUGaAUUU.................................................. len:23 al:24 ....................AACUGCUGAGAcUCUAUGGAUU................................................... len:22 al:18 ....................AACUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:923 ....................AACUGCUGAGAUUCUAgGGA..................................................... len:20 al:2 ....................AcCUGCUGAGAUUCUAUGGAUU................................................... len:22 al:18 ....................AACUGCUGAGAUUCUAUa....................................................... len:18 al:30 ....................AACUGCUGgGAUUCUAUGGAUUU.................................................. len:23 al:189 ....................AACUGCUGAGAUUCUAUGGu..................................................... len:20 al:8 ....................AACUGCUGgGAUUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUUCUgUGG...................................................... len:19 al:7 ....................AACUGCUGAuAUUCUAUGG...................................................... len:19 al:1 ....................AACUGCcGAGAUUCUAUG....................................................... len:18 al:1 ....................AACUGCUGAGAUUCUAUGG...................................................... len:19 al:2526 ....................AACUGaUGAGAUUCUAUGGAUUU.................................................. len:23 al:6 ....................AACUGuUGAGAUUCUAUGGAUUU.................................................. len:23 al:43 ....................AACUGCUGAGAUUCUAUGGAUg................................................... len:22 al:194 ....................AgCUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:246 ....................AACcGCUGAGAUUCUAUGGAUU................................................... len:22 al:21 ....................AACUGCUGAGAUUCUAUGaA..................................................... len:20 al:2 ....................gACUGCUGAGAUUCUAUGGAUU................................................... len:22 al:48 ....................AACUGCUGAGAUUCUAc........................................................ len:17 al:5 ....................AACUGCUGgGAUUCUAUGG...................................................... len:19 al:8 ....................AACUGCaGAGAUUCUAUGG...................................................... len:19 al:2 ....................AACUGCUGAGAUUCUAgG....................................................... len:18 al:13 ....................AACUGCUGAGAUUuUAUGGAUUUA................................................. len:24 al:36 ....................AACUGCUGAGgUUCUAUGGA..................................................... len:20 al:2 ....................AACUGCUGAGAgUCUAUGGAUUU.................................................. len:23 al:4 ....................AACUGCUGAGAUcCUAUGGAU.................................................... len:21 al:1 ....................AACUGgUGAGAUUCUAUGGAUU................................................... len:22 al:1 ....................AACUGCUGAGuUUCUAUGG...................................................... len:19 al:1 ....................AACUGCUGAGAUUCUAUaG...................................................... len:19 al:34 ....................AACUGCUGAGAUUCUcUGGAUUU.................................................. len:23 al:2 ....................AACUGCUGAGAUUCUAcGGAUUUA................................................. len:24 al:4 ....................AAuUGCUGAGAUUCUAUGGAUU................................................... len:22 al:2 ....................gACUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:5 ....................uACUGCUGAGAUUCUAUGGAU.................................................... len:21 al:2 ....................AACUGCUGAGAUUCUAUGGAUUUAAc............................................... len:26 al:4 ....................AcCUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:3 ....................AACUGCUGAGAUUCUAUGcAUUU.................................................. len:23 al:5 ....................gACUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:296 ....................AACUGCUGAGAUUCUAgGG...................................................... len:19 al:10 ....................AACUGCUGAGAUUCcAUGGAUU................................................... len:22 al:11 ....................AACUGCUGAGAUUCUAUGGuUU................................................... len:22 al:4 ....................AACUGCUGAGAUUCUAUGGAUUUAA................................................ len:25 al:17 ....................AACUGCgGAGAUUCUAUGGAUU................................................... len:22 al:114 ....................AACUGCUGAGAUaCUAUGGAUUU.................................................. len:23 al:10 ....................AACUGCUGAGcUUCUAUGGAUU................................................... len:22 al:2 ....................AACUGCUGAGAUUCUAUG....................................................... len:18 al:202 ....................AACUGCgGAGAUUCUAUG....................................................... len:18 al:2 ....................cACUGCUGAGAUUCUAUGG...................................................... len:19 al:23 ....................AACUGCUGAGAUUCUAcGG...................................................... len:19 al:10 ....................AACUGCcGAGAUUCUAUGG...................................................... len:19 al:7 .....................ACUGCgGAGAUUCUAUGGAUU................................................... len:21 al:1 .....................ACUGCUGAGAUUCUAcGGAUUU.................................................. len:22 al:2 .....................ACUGCUGAGAUUCUAUGG...................................................... len:18 al:14 .....................ACUGCUGAGAUUCUAUGGAUUc.................................................. len:22 al:124 .....................ACUGCUGAGAUUCUAUGGAUU................................................... len:21 al:37 .....................ACUGCUGAGAUUCcAUGGAUUU.................................................. len:22 al:2 .....................gCUGCUGAGAUUCUAUGGAUUUA................................................. len:23 al:1 .....................ACUGCUGAGAUUCUAUGGAUgU.................................................. len:22 al:13 .....................uCUGCUGAGAUUCUAUGGAUUU.................................................. len:22 al:1 .....................ACUGCUGAGAUUCUAUGGAUUg.................................................. len:22 al:6 .....................ACUGCUGAGAUUCUAUGaAUUU.................................................. len:22 al:1 .....................ACUGCUGuGAUUCUAUGGAUUU.................................................. len:22 al:1 .....................ACUGCUaAGAUUCUAUGGAUUU.................................................. len:22 al:2 .....................ACUGCUGAGAUUCUAUGGAUUU.................................................. len:22 al:551 .....................ACUGCUGAGAUUCUAUGGAUcU.................................................. len:22 al:3 .....................ACUGCUGAGAUUCUAUGGAUUUA................................................. len:23 al:7 .....................ACUGCUGAGAUUCUAUGa...................................................... len:18 al:5 .....................AuUGCUGAGAUUCUAUGGAUUU.................................................. len:22 al:1 .....................ACUGCUGAGAUUCUAUGGg..................................................... len:19 al:2 .....................ACUGCUGAGAUUCUAUGGA..................................................... len:19 al:1 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...................................................UCCAUAGAACUUCUGCAUUUGu.................... len:22 al:563 ...................................................UCCAUcGAACUUCUGCAUUUGA.................... len:22 al:1 ...................................................UCCAUAGAACUUCaGCAUUUGA.................... len:22 al:5 ...................................................cCCAUAGAACUUCUGCAUUUGA.................... len:22 al:120 ...................................................UCCAUAGAACUUCUGCgUUUG..................... len:21 al:1 ...................................................UCCAUAGAACUaCUGCAUUUGA.................... len:22 al:3 ...................................................UCCgUAGAACUUCUGCAUUUGA.................... len:22 al:32 ...................................................UCCAUAGAACUUCUGCAUU....................... len:19 al:16 ...................................................UCuAUAGAACUUCUGCAUUUGA.................... len:22 al:4 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...................................................UCCAUgGAACUUCUGCAUUUG..................... len:21 al:1 ...................................................UCCAUAGAACUUCUGCAUUUGg.................... len:22 al:204 ...................................................UCCAUAGAACUUCUGCAUUUGAUa.................. len:24 al:1 ...................................................UCCAUAGAACUUCUGCAUUc...................... len:20 al:3 ...................................................UCCAUAGAACUUCUuCAUUUGA.................... len:22 al:1 ...................................................UCCAUAGAACUUCUGCAUUUGc.................... len:22 al:47 ...................................................UCCAUAGAACUUuUGCAUUUGA.................... len:22 al:3 ...................................................UCCAUAGAACUUCUGCAUUcG..................... len:21 al:3 ...................................................UCCAUAGAACUUCUGCAUUUGAaU.................. len:24 al:1 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...................................................UCCAUAGAACUUCUGuAUUUGA.................... len:22 al:4 ...................................................UCCAUAGAgCUUCUGCAUUUGA.................... len:22 al:42 ...................................................UCCAUAaAACUUCUGCAUUUGA.................... len:22 al:3 ...................................................UCCAUAGAACUUCUGaAUUUGA.................... len:22 al:3 ...................................................aCCAUAGAACUUCUGCAUUUG..................... len:21 al:2 ...................................................UCCAUAGAACUUCUGCAUUUGAUU.................. len:24 al:6 ...................................................UCCAUAGAACUUCUGCAUUU...................... len:20 al:10 ...................................................UCCcUAGAACUUCUGCAUUUGA.................... len:22 al:2 ...................................................UCCAUAGAACUUCUGCAUcUGA.................... len:22 al:10 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