Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/F-Ptuh/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/F-Ptuh/output/05-Ptuh-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000000:20372416-20372510 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/F-Ptuh/output/05-Ptuh-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_360.ps.pdf
Locus Name: Cluster_360
AUAUGCAGUGAAUUAAGACACUAAACCAGACUAGGCUUCAGCAUAUUUAUUUUGUCAAGUCUAGGCUGGUUAGUUUUCUCACUUCACACUUCAAU
.......(((((...(((.(((((.((((.((((((((..(((.........))).)))))))).)))))))))..)))...)))))........ (-26.60)
AUAUGCAGUGAAgUAAGACA........................................................................... len:20 al:1
.UAUGCAGUGAAgUAAGACA........................................................................... len:19 al:1
....................CUAAACCAGACUuGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGCg.................................................... len:23 al:24
....................CUAAACCAGACUAGGCUUCgGCA.................................................... len:23 al:2
....................CUAAACCAGACUAGGCcU......................................................... len:18 al:1
....................CUAAACCAGACUAGGCUUCAcC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGCAUuU................................................. len:26 al:1
....................CUAAACCAGACUAGGCUUa........................................................ len:19 al:5
....................CUAgACCAGACUAGGCUUCAGC..................................................... len:22 al:3
....................aUAAACCAGACUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGgCUAGGCUUCAGCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUcCAGCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAGCc.................................................... len:23 al:34
....................CUAAACCgGACUAGGCUUCAGCA.................................................... len:23 al:3
....................CUAAACCAGACUAGGCUUCAGCAg................................................... len:24 al:3
....................CUAAACCAGACUAGGCUUCu....................................................... len:20 al:5
....................CUAAACCAGgCUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAGGCUUCAGCAUu.................................................. len:25 al:3
....................CUAAACCAGACUAGGCUa......................................................... len:18 al:1
....................CUAAACCAGACUAGGCUUCAGuA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUcCAGC..................................................... len:22 al:4
....................CUAAACCAGACUAGGCUUCAGCAU................................................... len:24 al:16
....................CUAAACCAGuCUAGGCUUCAGC..................................................... len:22 al:1
....................CUgAACCAGACUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCcUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUcCA....................................................... len:20 al:1
....................CcAAACCAGACUAGGCUUC........................................................ len:19 al:1
....................CUAAACCAGACUAGGCUUCA....................................................... len:20 al:18
....................uUAAACCAGACUAGGCUUCAGCA.................................................... len:23 al:2
....................CUAAACCAGACUAGGCUUCAGaA.................................................... len:23 al:1
....................CUgAACCAGACUAGGCUUCAGCA.................................................... len:23 al:4
....................CUAAACCAGACUAGGCUUCAGCA.................................................... len:23 al:241
....................uUAAACCAGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUgAACCAGACUAGGCUUC........................................................ len:19 al:1
....................CUAAgCCAGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGAuUAGGCUUCAGCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAcCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAGCu.................................................... len:23 al:91
....................CUAAACCAGACUAGGCUUCAGCAc................................................... len:24 al:1
....................CUAAACCAGACUAGGCUUCAGCAUA.................................................. len:25 al:2
....................CUAAACCAGACUAGGCUaC........................................................ len:19 al:3
....................CUAAACCAGACUAGGCUUCAGC..................................................... len:22 al:557
....................CUAAACCAGACUAGGCUUCAa...................................................... len:21 al:2
....................CUAAACCAGACUAGGCUUC........................................................ len:19 al:94
....................CUAAACCAGACUAGGCUUCAaC..................................................... len:22 al:22
....................CUAAACCAGACUAGGCUUCcGC..................................................... len:22 al:1
....................CUAAACCgGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAGGCUUu........................................................ len:19 al:4
....................CUAAACCAGACUAGGCUUCAGgAU................................................... len:24 al:1
....................CUAAACCAGACUAGGCUUCAG...................................................... len:21 al:14
....................CUAAACCAGACUAGGCUU......................................................... len:18 al:2
....................CUAAACCAGACUgGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCcGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAuGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGCuU................................................... len:24 al:3
....................CUAAACCAGACUAGGCUUCAGCAUAUa................................................ len:27 al:1
....................CcAAACCAGACUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGCAa................................................... len:24 al:7
....................CUAAACCAGACUAGGuUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGu..................................................... len:22 al:96
....................CUAAACCAGACUAGGCaU......................................................... len:18 al:1
....................CUAAACCAGACUAGGCUUCAGa..................................................... len:22 al:62
....................CUAAACCAGACUAGGCUUCAu...................................................... len:21 al:3
....................CUAAACCAGACUAGGCUcC........................................................ len:19 al:1
....................CUAAgCCAGACUAGGCUUCAGCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAuC..................................................... len:22 al:1
....................CUAAACCAGACcAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGCAaAU................................................. len:26 al:1
....................CUAAACCAGACUAGGCUUCAGg..................................................... len:22 al:2
.....................UAAACCAGACUAGGCUUCAGCc.................................................... len:22 al:4
.....................UAAACCuGACUAGGCUUC........................................................ len:18 al:1
.....................UAgACCAGACUAGGCUUCAGCAU................................................... len:23 al:2
.....................UAAACCAGACUAGGCUUCAaC..................................................... len:21 al:4
.....................UAAACCAGACUAGGCUUCAGCAUA.................................................. len:24 al:4
.....................UAAACCAGACUAGGCUUCAGu..................................................... len:21 al:14
.....................UAAACCAGACUAGGCUUCAGCAc................................................... len:23 al:12
.....................UAAACCAGACUAGGCUUCAGCgU................................................... len:23 al:3
.....................UAAACCAGACUAGGCUcC........................................................ len:18 al:1
.....................UAAACCAGACUAGGCUUCAGC..................................................... len:21 al:93
.....................UAAACCAGACUAGGCUUCAGaA.................................................... len:22 al:2
.....................UAAACCAGACUAGGCUUCAGCu.................................................... len:22 al:16
.....................UAAACCAGACUAGGCUUCAGCAUc.................................................. len:24 al:1
.....................UAAACCAGACUAGGCUUCAGCA.................................................... len:22 al:20
.....................UAAACCAGACUAGGCUaC........................................................ len:18 al:2
.....................UAAACCAGACUAGGCUUCAG...................................................... len:20 al:6
.....................aAAACCAGACUAGGCUUCAGCAU................................................... len:23 al:1
.....................UAAACCAGACUAGGCUUCAGCg.................................................... len:22 al:6
.....................UAAACCAGACUgGGCUUCAGC..................................................... len:21 al:2
.....................UAAACCAGACUAGGCUUCAGCAUu.................................................. len:24 al:4
.....................UAAACCAGACUAGGCUUCAGCAg................................................... len:23 al:4
.....................UAAACCAGACUAGGCUUCAGCAa................................................... len:23 al:6
.....................UAAACCAGACUAGGCUUC........................................................ len:18 al:18
.....................UAAACCAGACUAGGCUUCAGCAU................................................... len:23 al:51
.....................UAAACCAGACUAGGCUUCAGa..................................................... len:21 al:13
......................cAACCAGACUAGGCUUCAGC..................................................... len:20 al:2
......................AAACCAGACUAGGCUUCAGCA.................................................... len:21 al:1
......................AAACCAGACUAGGCUUCAGC..................................................... len:20 al:3
......................AAACCAGACUAGGCUUCAGCAc................................................... len:22 al:1
......................AAACCAGACUAGGCUUCAGa..................................................... len:20 al:1
........................ACCAGACUAGGCUUCAGCA.................................................... len:19 al:1
.............................................UUUAUUUUGUCAAGUCUAGGCUGGUUAGUc.................... len:30 al:1
.............................................UUUAUUUUGUCAAGUCUAGGCUGGUUAGUUU................... len:31 al:5
.............................................UUUAUUUUGUCAAGUCUAGGCUGGUUAGUU.................... len:30 al:1
...............................................UAUUUUGUCAAGUCUAGGCUGGUUAGUUc................... len:29 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUUU................... len:24 al:27
....................................................UGUCAAGUCUAGGCUGGUUAGUgU................... len:24 al:2
....................................................UGUCAAGUCUAGGCUGGUUAGU..................... len:22 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUUa................... len:24 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUU.................... len:23 al:3
....................................................UGUCAAGUCUAGGCUGGUUAGUc.................... len:23 al:3
....................................................UGUCAAGUCUAGGCUGGUUAGUUg................... len:24 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUUc................... len:24 al:3
....................................................UGcCAAGUCUAGGCUGGUUAGUUU................... len:24 al:1
.....................................................GUCAAGUCUAGGCUGGUUAGUUU................... len:23 al:1
.....................................................cUCAAGUCUAGGCUGGUUAGUUU................... len:23 al:17
.....................................................GUCAAGUCUAGGCUGGUU........................ len:18 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUUg.................. len:23 al:16
......................................................UCAAGUCUAGGCUGGUUuGUU.................... len:21 al:3
......................................................aCAAGUCUAGGCUGGUUA....................... len:18 al:1
......................................................UCAAGUCUAGGCUGG.......................... len:15 al:1
......................................................cCAAGUCUAGGCUGGUUAGU..................... len:20 al:5
......................................................UCAAGUCUAGuCUGGUUAGUUU................... len:22 al:29
......................................................UCAAGUCUgGGCUGGUUAGUUU................... len:22 al:1119
......................................................UCAAGUCUAGGCUGGUg........................ len:17 al:1
......................................................aCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:4
......................................................UCAAGUCUAcGCUGGUUAGUUU................... len:22 al:1
......................................................UCAAGUCUAGGCUGGUUAGUc.................... len:21 al:3024
......................................................UCAcGUCUAGGCUGGUUAGUUU................... len:22 al:30
......................................................UCAAGUCUAGGCUGGUUAGUg.................... len:21 al:366
......................................................UCAAGUCUAGGCgGGUUAGU..................... len:20 al:1
......................................................UCAgGUCUAGGCUGGUUAG...................... len:19 al:1
......................................................UCAAGUCUAGGCUGGUUAGgUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGaUUAG...................... len:19 al:1
......................................................UaAAGUCUAGGCUGGUUAGUUU................... len:22 al:105
......................................................UCAAGUuUAGGCUGGUUAGUUU................... len:22 al:99
......................................................UCAAGUCUAGGCUGGUUAuUUU................... len:22 al:35
......................................................UCAAGUCUAGGCUGGUUAGUUcU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGGUUgGUUU................... len:22 al:815
......................................................UCAAuUCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCaGGUUAGUUU................... len:22 al:158
......................................................UCAAGUCUAGGCUGuUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGaUAGUUU................... len:22 al:71
......................................................UCAAGUCUAGGCUGGUUAGUUU................... len:22 al:361684
......................................................UCAAGUCUAGGCUGGcUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGGUUAGUUUc.................. len:23 al:64
......................................................UCAAGUCUAGGCUaGUUAGUUU................... len:22 al:344
......................................................UCAAGUCUAGGCUGGUUAGUcUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGUgAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUuGUUAGUUU................... len:22 al:50
......................................................UCAAGUCUAGGCUGGUUuGU..................... len:20 al:11
......................................................UCAAGUCUAcGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGGUaAGUUU................... len:22 al:36
......................................................UCAAGUCUAGGCUGGUUAGcUU................... len:22 al:2649
......................................................UCAAGUCUAGGCUGGUUAGUUaU.................. len:23 al:16
......................................................UCAAGUCUAGGCUGGcUAGUU.................... len:21 al:29
......................................................UCAAGUCUAGGCUGGUUAc...................... len:19 al:1
......................................................UCAAGUCUAGGCUGGUUAuUU.................... len:21 al:1
......................................................UCAAGUCUgGGCUGGUU........................ len:17 al:1
......................................................UCgAGUCUAGGCUGGUUAGUUU................... len:22 al:1361
......................................................UCAAGUCUAGGCUGGUUAGUgUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGUUAcUUU................... len:22 al:22
......................................................UCAgGUCUAGGCUGGUUAGUUUU.................. len:23 al:2
......................................................UCuAGUCUAGGCUGGUUAGUU.................... len:21 al:9
......................................................UCAAGUCUAGGCUGGUUuGUUU................... len:22 al:49
......................................................UCuAGUCUAGGCUGGUUAGUUU................... len:22 al:226
......................................................UCAAGUCUAGGCUGGUUAGg..................... len:20 al:20
......................................................UCAAGUCUAGGCUGGcUAGUUU................... len:22 al:915
......................................................UCAAGUCUAGGCUGGUUAGUUg................... len:22 al:8346
......................................................UCAgGUCUAGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAGUCUAGGCUGGUUAGUUUUu................. len:24 al:14
......................................................UuAAGUCUAGGCUGGUUAGUU.................... len:21 al:15
......................................................UCAAGUCUAGuCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGUU........................ len:17 al:46
......................................................UCAAGUCUAGGCUGGUUAaUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGUgAGUUUUC................. len:24 al:1
......................................................UCAAGUCUAGGCUaGUUAGUU.................... len:21 al:13
......................................................UCAAGUCUAGcCUGGUUAGUUU................... len:22 al:11
......................................................UCAAGUCUAGGCcGGUUAGUU.................... len:21 al:32
......................................................cCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:8
......................................................UCAAGUCUAGGCUGaUUAGUUU................... len:22 al:165
......................................................UCAAGUCUAGaCUGGUUAGUUU................... len:22 al:297
......................................................UCAAGUCUAGaCUGGUUAGUUUU.................. len:23 al:1
......................................................UaAAGUCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGuUGGUUAGUU.................... len:21 al:4
......................................................UgAAGUCUAGGCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGgUAGUU.................... len:21 al:3
......................................................UCAAGUCUAGGCUGGUUAGcU.................... len:21 al:117
......................................................aCAAGUCUAGGCUGGUUAGUUU................... len:22 al:2253
......................................................UCAAGUCUAGGCUGGUUAGU..................... len:20 al:442
......................................................UCAAGUCUAGGCUGGUcAGUU.................... len:21 al:26
......................................................UCAAGaCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:532
......................................................gCAAGUCUAGGCUGGUUAGUUU................... len:22 al:131
......................................................gCAAGUCUAGGCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUaGUUAG...................... len:19 al:1
......................................................UCgAGUCUAGGCUGGUUAGUU.................... len:21 al:50
......................................................UCAAGUCUAGGCcGGUUAGUUU................... len:22 al:873
......................................................UCAAGUCUAGGCUGGUUg....................... len:18 al:2
......................................................UCAAGUCUcGGCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGcCUAGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCUAGGCUGGUUAGUcU................... len:22 al:1814
......................................................UCAAGUuUAGGCUGGUUAGUU.................... len:21 al:5
......................................................UCAAGUCUAGGCUaGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGUUAaU..................... len:20 al:1
......................................................UCAAGUCUAGGCUcGUUAGUUU................... len:22 al:16
......................................................UCAgGUCUAGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCUgGGCUGGUUAGUU.................... len:21 al:36
......................................................UCAAGUaUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UCcAGUCUAGGCUGGUUAGUUU................... len:22 al:91
......................................................aCAAGUCUAGGCUGGUUAGUU.................... len:21 al:78
......................................................UCAAGUCUAGGCUGGUUAu...................... len:19 al:1
......................................................UCAAGUCUAGGCUGGUcAGUUU................... len:22 al:534
......................................................UCAAGUCUAGGCUGGUUAaUUU................... len:22 al:99
......................................................UCAAGUCUAGGCUGGUaAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGGUUAcUU.................... len:21 al:1
......................................................UCAAGUCUAGGCaGGUUAGUUUU.................. len:23 al:2
......................................................aCAAGUCUAGGCUGGUUAGU..................... len:20 al:1
......................................................UuAAGUCUAGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAGUCUAGGCaGGUUAGUU.................... len:21 al:6
......................................................UCAAGcCUAGGCUGGUUAGUU.................... len:21 al:42
......................................................UCAAGUCUAGGCUGGUUAGUUUa.................. len:23 al:1066
......................................................UCAcGUCUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UCAAGUCUgGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAuUCUAGGCUGGUUAGUUU................... len:22 al:29
......................................................UCAAGUCUAaGCUGGUUAGUU.................... len:21 al:9
......................................................UCAuGUCUAGGCUGGUUAGUUU................... len:22 al:86
......................................................UCAAGUCUAGGCUGGUUAGUU.................... len:21 al:13428
......................................................UCAAGUCUAGGCUGGUUA....................... len:18 al:11
......................................................UCuAGUCUAGGCUGGUUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUuGGCUGGUUAGUU.................... len:21 al:6
......................................................UCAAGUCUAGGCcGGUUAGUUUU.................. len:23 al:2
......................................................cCAAGUCUAGGCUGGUUAGUU.................... len:21 al:174
......................................................UCAAGgCUAGGCUGGUUAGUUU................... len:22 al:38
......................................................UCAAGUCUAGGCUGGUUAGaUU................... len:22 al:106
......................................................UCAAcUCUAGGCUGGUUAGUUU................... len:22 al:6
......................................................UCAAGUCUuGGCUGGUUAGUUU................... len:22 al:90
......................................................UCAAGUCUAGGCUGcUUAGUUU................... len:22 al:8
......................................................UCAAGUCUcGGCUGGUUAGUUU................... len:22 al:44
......................................................UCAAGUCaAGGCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCcAGGCUGGUUAGUUU................... len:22 al:727
......................................................UCAAGcCUAGGCUGGUUAGUUU................... len:22 al:1206
......................................................UCAAGUCUAGGCUGGUUAGUUUaC................. len:24 al:21
......................................................UCAAGUCUAuGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGGUUAGUaU................... len:22 al:4645
......................................................UCAAGUCUAGGaUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCcAGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAGUCUAGGCUGGc......................... len:16 al:2
......................................................UCAAGUCUAGGCUuGUUAGUU.................... len:21 al:1
......................................................UCAAaUCUAGGCUGGUUAGUUU................... len:22 al:136
......................................................UCAAaUCUAGGCUGGUUAGUU.................... len:21 al:10
......................................................UgAAGUCUAGGCUGGUUAGUUU................... len:22 al:89
......................................................UCAAGUCUAGGuUGGUUAGUUU................... len:22 al:280
......................................................UCAAGUCUAGGCUGGUUAGUUUUa................. len:24 al:25
......................................................cCAAGUCUAGGCUGGUUAGUUU................... len:22 al:5213
......................................................UCAAGUCUAGGCaGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGGUUAa...................... len:19 al:8
......................................................UCAAGUCUAGGCUGGUgAGUUU................... len:22 al:26
......................................................UCAAGUCUAGGCUGGUUAGUUgU.................. len:23 al:11
......................................................UCcAGUCUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UCAAGUCUAGGCUGGUUAGc..................... len:20 al:91
......................................................UaAAGUCUAGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCUAGGCUGGUUAG...................... len:19 al:15
......................................................UCAAGUCUAuGCUGGUUAGUUU................... len:22 al:65
......................................................UCAAGUCUAGGCUGGUUAGgUU................... len:22 al:280
......................................................UCAAGUCUAGGCUGGUUgGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGGUUAGcUUU.................. len:23 al:2
......................................................UCAAGUCUuGGCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAgGUCUAGGCUGGUUAGUUU................... len:22 al:1295
......................................................UCAAGUCUAGGCUGGUUcGUUU................... len:22 al:28
......................................................UCAAGUCUAGGCUGGgUAGUUU................... len:22 al:76
......................................................UCAAGUCUAGGCUGGaUAGUU.................... len:21 al:2
......................................................UCAAGgCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGaUUAGUU.................... len:21 al:5
......................................................UCAAGUCUAGGCUGGUUAGaU.................... len:21 al:41
......................................................UCAAGUCUAGGCUGGUUAGUa.................... len:21 al:1051
......................................................UCAAGUCUAGGCgGGUUAGUUU................... len:22 al:93
......................................................UCAgGUCUAGGCUGGUUAGUU.................... len:21 al:61
......................................................UCAAGcCUAGGCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGUUgGU..................... len:20 al:3
......................................................UCAAGUCgAGGCUGGUUAGUUU................... len:22 al:41
......................................................aCAAGUCUAGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCcAGGCUGGUUAGUU.................... len:21 al:29
......................................................UCAAGUgUAGGCUGGUUAGUUU................... len:22 al:3
......................................................UCAAGUCUAaGCUGGUUAGUUU................... len:22 al:203
......................................................UCAAaUCUAGGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUc................... len:22 al:65966
......................................................UCAAGUCUAGGCUGGUc........................ len:17 al:4
......................................................UCAAGUaUAGGCUGGUUAGUUU................... len:22 al:39
......................................................UCAAGUCUAGGCUGGUUAGUgU................... len:22 al:8010
......................................................UCAAGUCUAGGCUGuUUAGUUU................... len:22 al:80
......................................................UCAAGaCUAGGCUGGUUAGUUU................... len:22 al:76
......................................................UCAAGUCUAGGgUGGUUAGUUU................... len:22 al:16
......................................................UCAAGUCUAGGCUGGUUAGUUUUaU................ len:25 al:2
......................................................UCAAGUCaAGGCUGGUUAGUUU................... len:22 al:67
......................................................UuAAGUCUAGGCUGGUUAGUUU................... len:22 al:473
......................................................UCAAGUCUAGGCUGGUUgGUU.................... len:21 al:35
......................................................UCAuGUCUAGGCUGGUUAGUU.................... len:21 al:3
......................................................UCAAGUCUAGGCgGGUUAGUU.................... len:21 al:3
......................................................UCAAGUCUAGGCUGGUUAGUUa................... len:22 al:23486
......................................................UCAAGUCUAGGCUGGUUAGgU.................... len:21 al:405
......................................................UCAAGUCUAGGaUGGUUAGUUU................... len:22 al:33
......................................................UCAAGUCUAGGCUGGUUAGa..................... len:20 al:10
......................................................UCAAGUCUAGGCUGGcU........................ len:17 al:1
......................................................UCgAGUCUAGGCUGGUUAGUUUU.................. len:23 al:1
......................................................cCAAGUCUAGGCUGGUU........................ len:17 al:3
......................................................UCAAGcCUAGGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGaCUGGUUAGUU.................... len:21 al:10
.......................................................CAAGUCUAGGuUGGUUAGUUU................... len:21 al:2
.......................................................CAcGUCUAGGCUGGUUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUAGU..................... len:19 al:1
.......................................................CAAGUCUAGGCUGaUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUc.................... len:20 al:2
.......................................................CAAGUCUAGGCUGGUUAGgU.................... len:20 al:1
.......................................................CAAGUCUAGGCUGGUUcGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUAGUUc................... len:21 al:113
.......................................................CAAGUCUAGGCUGGUUAGUU.................... len:20 al:22
.......................................................uAAGUCUAGGCUGGUUAGUUU................... len:21 al:13
.......................................................CAAGUCUAGGCUGGUUAGUUUa.................. len:22 al:1
.......................................................CAAGUCUAGGCUGGUUAGUUUaC................. len:23 al:1
.......................................................CAAGUCUAGGCUGGUUAGUUU................... len:21 al:645
.......................................................CAAGUCUAGGCUGGcUAGUUU................... len:21 al:2
.......................................................CAgGUCUAGGCUGGUUAGUUU................... len:21 al:4
.......................................................CAAGUCUAGGCUGGUUAGUg.................... len:20 al:1
.......................................................CAAGUCgAGGCUGGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUa.................... len:20 al:1
.......................................................CAAGUCUAaGCUGGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUUg................... len:21 al:14
.......................................................CAAGUCUAGGCUGGUUAGgUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGcUU................... len:21 al:3
.......................................................CAAGcCUAGGCUGGUUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUAGUUUUu................. len:23 al:1
.......................................................CAAGUCcAGGCUGGUUAGUUU................... len:21 al:3
.......................................................CAAGUCUAGGCUGGUUAGUUa................... len:21 al:55
.......................................................CAAGUCUAGGCUGGUUAGUgU................... len:21 al:11
.......................................................CAAGUCUAGGCUGGUUgGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUaU................... len:21 al:15
.......................................................CAAGUCUAGGCUGGUUAGUcU................... len:21 al:4
.......................................................CgAGUCUAGGCUGGUUAGUUU................... len:21 al:3
.......................................................CAAGUCUAGGCcGGUUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUaGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUU........................ len:16 al:1
........................................................AAGUCUAGGCUGGUUgGUUU................... len:20 al:2
........................................................AAGUCUAGGCUGGaUAGUUU................... len:20 al:1
........................................................AAGUCUgGGCUGGUUAGUUU................... len:20 al:3
........................................................AAGUCUAGGCUGuUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUcU................... len:20 al:4
........................................................AAGUCUAGGCUGGUUAGcUU................... len:20 al:2
........................................................AAGUCUAGGCUGGUUAGUUaU.................. len:21 al:1
........................................................AAGUCcAGGCUGGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUaU................... len:20 al:4
........................................................AAGUCUAGGCUGGUUAGUU.................... len:19 al:10
........................................................AAGUCUAGGCUGGUUAGUUUa.................. len:21 al:1
........................................................AAGUCUAGGCUaGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGcUAGUUU................... len:20 al:1
........................................................cAGUCUAGGCUGGUUAGUUU................... len:20 al:5
........................................................AAGUCUAGGCUGGUUAGUUU................... len:20 al:222
........................................................AAGUCUAGGCUGGUUAGUc.................... len:19 al:3
........................................................uAGUCUAGGCUGGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUgU................... len:20 al:7
........................................................AuGUCUAGGCUGGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUUc................... len:20 al:50
........................................................AAGUCUAGGCUGGUUAGUa.................... len:19 al:2
........................................................AAGcCUAGGCUGGUUAGUUU................... len:20 al:3
........................................................AAGUCUAGGCUGGUUAGUUa................... len:20 al:12
........................................................AAGUCUAGGCUGGUUAGUUg................... len:20 al:6
.........................................................AGUCUAGGCUGGUUAGUUc................... len:19 al:3
.........................................................AGUCUAGGCUGGUUAGUUU................... len:19 al:29
.........................................................AGUCUAGGCUGGUUAGUU.................... len:18 al:4
.........................................................AGUCUAGGCUGGUUAGUUa................... len:19 al:3
.........................................................AGUCUAGGCUGGUUAGUa.................... len:18 al:1
.........................................................AGUCUAGGCUGGUUAGUUg................... len:19 al:1
.........................................................AGUCUAGGCUGGUUAGUaU................... len:19 al:1
..........................................................GUCUAGGCUGGUUAGUUU................... len:18 al:2
..........................................................GUCUAGGCUGGUUAGUUa................... len:18 al:1