Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_1128:125526-125618 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_9983.ps.pdf
Locus Name: Cluster_9983
UGUAGACUGAAAGAAAGUAAUCGUCCAAAUUGACACAUGGUUUUUAAUACCAUGUGUUAAUUUGGACGAUUACUUUUUUUUAAAAAACCAGUU
.......((((((((((((((((((((((((((((((((((.......))))))))))))))))))))))))))))))))))........... (-49.00)
.GUAGACUGAAAGAAAGUAAU........................................................................ len:20 al:14
..UAGACUGAAAGAAAGUAAU........................................................................ len:19 al:3
.................UAAUCGUCCAAAUUGACACAUGG..................................................... len:23 al:3
...................AUCGUCCAAAUUGACACAUGG..................................................... len:21 al:2
....................UCGUCCAAAUUGACACAUGGUUU.................................................. len:23 al:12
....................UCGUCCAAAUUGACACAUGGUg................................................... len:22 al:1
....................UCGUCCAAAUUGACACAUGGU.................................................... len:21 al:5
....................UCGUCCAAgUUGACACAUGGUU................................................... len:22 al:1
....................UCGUCCAAAUUGACACAUGu..................................................... len:20 al:1
....................UCGUCCAAAUUGACACAUGGUUa.................................................. len:23 al:3
....................UCGUCCAAAUUGACACAUGGUc................................................... len:22 al:3
....................UCGUCCAAAUUGACACAUGG..................................................... len:20 al:22
....................UCGUCCAAAUUGgCACAUGGUU................................................... len:22 al:2
....................UCGUCCAAAUUGACACAUGGUU................................................... len:22 al:29
....................UCGUCCAAAUUGACACAUGGUUUU................................................. len:24 al:3
.....................CGUCCAAAUUGACACAUGa..................................................... len:19 al:2
.....................CGUCCAAAUUGACACAUGGUc................................................... len:21 al:4
.....................CGUCCAAAUUGACgCAUGGUU................................................... len:21 al:2
.....................CGUCCAAAUUGACACAUGGUU................................................... len:21 al:19
.....................CGUCCAAAUUGACACAUGG..................................................... len:19 al:18
.......................UCCAAAUUGACACAUGGUU................................................... len:19 al:2
...............................................UACCAUGUGUUAAUUUGGACGAU....................... len:23 al:2
.................................................CCAUGUGUUAAUUUGGACGAUc...................... len:22 al:1
.................................................CCAUGUGUUAAUUUGGAu.......................... len:18 al:1
.................................................CCAUGUGUUAAUUUGGACGAgU...................... len:22 al:1
.................................................CCAUGUGUUAAUUUGGACGAcU...................... len:22 al:6
.................................................CCAUGUGUUAAUUUGGACGAUU...................... len:22 al:45
..................................................CAUGUGUUAAUUcGGACGAUU...................... len:21 al:2
..................................................CAUGUGUUAAgUUGGACGAUU...................... len:21 al:1
..................................................CAUGUGUUAAUUUGGgCGAU....................... len:20 al:2
..................................................CAUGcGUUAAUUUGGACGAUU...................... len:21 al:5
..................................................CAUGUGUUAAUUUGGACGAUa...................... len:21 al:17
..................................................CAUGUGUUgAUUUGGACGAUU...................... len:21 al:6
..................................................uAUGUGUUAAUUUGGACGAUU...................... len:21 al:5
..................................................CAUGUGUUAAUUUGGACGAUUu..................... len:22 al:49
..................................................CAUGUGUUAAUUUGGACaAUU...................... len:21 al:1
..................................................CAUGUGUUAAUUUGGACGAUUA..................... len:22 al:10
..................................................CAUGUGUUAAUUUGGACGgUU...................... len:21 al:9
..................................................CAUGUGUUAAUUUGGACuAUU...................... len:21 al:1
..................................................CAUGUGUUAAUUUGGACGAgU...................... len:21 al:15
..................................................CAUGUGUUAAUcUGGACGAUU...................... len:21 al:7
..................................................CAUGUGUUAAUUUGGACGAUg...................... len:21 al:5
..................................................CAUGUGUUAAUUUGGACGu........................ len:19 al:14
..................................................CAUGUGUUAAUUUGGACGAg....................... len:20 al:3
..................................................CAUGUGUUAAUcUGGACGAU....................... len:20 al:1
..................................................CAUaUGUUAAUUUGGACGAUU...................... len:21 al:1
..................................................CAUGUGUUAAUUUGGACGAUUc..................... len:22 al:7
..................................................CAUGUGUUAAUUUGGACGAU....................... len:20 al:344
..................................................CAUGUGUUAAUUUGGACGAUc...................... len:21 al:120
..................................................CAUGUGUUAAUUUGGACGAcU...................... len:21 al:4
..................................................CAUGUGcUAAUUUGGACGAU....................... len:20 al:1
..................................................CAUGUGUUAgUUUGGACGAUUA..................... len:22 al:1
..................................................CAUGUGUUAAUUUGGACaAU....................... len:20 al:1
..................................................CAUGUaUUAAUUUGGACGAUU...................... len:21 al:1
..................................................CAUGcGUUAAUUUGGACGAU....................... len:20 al:1
..................................................CAUGaGUUAAUUUGGACGAUU...................... len:21 al:2
..................................................CAUGUGUUAAUUUGGACGAc....................... len:20 al:33
..................................................CgUGUGUUAAUUUGGACGAUU...................... len:21 al:3
..................................................CAUGUGcUAAUUUGGACGAUU...................... len:21 al:4
..................................................aAUGUGUUAAUUUGGACGAUU...................... len:21 al:10
..................................................CAUGUGUgAAUUUGGACGAUU...................... len:21 al:1
..................................................CAUGUGUUAAUUUGGuCGAUU...................... len:21 al:1
..................................................CAcGUGUUAAUUUGGACGAU....................... len:20 al:1
..................................................CAUGUGUUAAUUUGGACa......................... len:18 al:6
..................................................CAUGUGUUAAUUUGGACGuU....................... len:20 al:2
..................................................CAUGUGUUAAUUUGGACGgU....................... len:20 al:5
..................................................CAUGUGUUAgUUUGGACGAUU...................... len:21 al:3
..................................................CAUGUuUUAAUUUGGACGAUU...................... len:21 al:2
..................................................CAUGUGUUAAUUUGGACG......................... len:18 al:29
..................................................CAcGUGUUAAUUUGGACGAUU...................... len:21 al:4
..................................................CAUGUGUUAAUUUGGACGA........................ len:19 al:10
..................................................CAUGUGUUAAUUUGGACGAUUg..................... len:22 al:1
..................................................uAUGUGUUAAUUUGGACGAU....................... len:20 al:1
..................................................CAUGUGUUAAUUUGGACc......................... len:18 al:2
..................................................CAUGUGUUAAUUUGGgCGAUU...................... len:21 al:4
..................................................CAUGUGUUAAUUUGGACGAUU...................... len:21 al:1459
...................................................AcGUGUUAAUUUGGACGAUU...................... len:20 al:1
...................................................AUGUGUUAAUUUGGACGAUU...................... len:20 al:149
...................................................AUGUGUUAAUUUGGAuGAUU...................... len:20 al:1
...................................................AUGUGUUAAUUUGGACGAUc...................... len:20 al:3
...................................................AUGUGUUAAUUUGaACGAUU...................... len:20 al:1
...................................................AUGUGUUAAUUUGGACGAcU...................... len:20 al:1
...................................................AUGUGUUAAUUUGGACGAU....................... len:19 al:7
...................................................AUGUGUUAAUUaGGACGAUU...................... len:20 al:1
...................................................AUGUGUUAAUUUGGACGu........................ len:18 al:3
...................................................AUGUGUUAgUUUGGACGAU....................... len:19 al:1
...................................................AUGUGUUAAUUUGGACGgUU...................... len:20 al:1
...................................................AaGUGUUAAUUUGGACGAU....................... len:19 al:1
....................................................UGUGUUAAUUUGGACGAUUA..................... len:20 al:4
....................................................UGUaUUAAUUUGGACGAUU...................... len:19 al:1
....................................................UGUGUUAAUUUGGACGgUU...................... len:19 al:1
....................................................UGUGUUAAUUUGGACGAUc...................... len:19 al:11
....................................................UGUGUUAAUUUGGACGAUU...................... len:19 al:88
....................................................UGaGUUAAUUUGGACGAUU...................... len:19 al:2
....................................................UGUGUUAAUUUGGACGAUUu..................... len:20 al:1