Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_910:118720-118809 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_8887.ps.pdf
Locus Name: Cluster_8887
AUGAAGACUGGCGAUGCGAGUCCAAUGUUUCGGCUUGUUCCCGUUUUCGGGAACAAGCCGAAACAUUUGACUUUUGUCUGCCAAUAUACA
........((((((((.(((((.((((((((((((((((((((....)))))))))))))))))))).))))).)))).))))....... (-51.50)
....................UCCAAUGUUUCGGCUUGUUCCCG............................................... len:23 al:5
.....................CCAAUGUUUCGGCUUGUUCCCGU.............................................. len:23 al:6
.....................CCAAUGUcUCGGCUUGUUCCCG............................................... len:22 al:2
.....................CCAAUGUUUCGGCUUGUUCCCG............................................... len:22 al:2
.....................aCAAUGUUUCGGCUUGUUCCCG............................................... len:22 al:3
......................CAAUGUUUuGGCUUGUUCCCGUU............................................. len:23 al:2
......................CAAUGUUUCGGCUUGUcCCCGUU............................................. len:23 al:2
......................CuAUGUUUCGGCUUGUUCCCG............................................... len:21 al:12
......................CAAUGUUUCGGCUUGcUCCCG............................................... len:21 al:218
......................CAAUGUUUCGGCUUcUUCCCG............................................... len:21 al:1
......................CAAUGUUUCGGCUUGUUCCCu............................................... len:21 al:10
......................CAAUGUUUCGGCUUuUUCCCG............................................... len:21 al:4
......................CAAUuUUUCGGCUUGUUCCCG............................................... len:21 al:1
......................CAAUGUUUCGGCUUGUUCCCc............................................... len:21 al:3
......................CAAUGUUUCGGCcUGUUCCCG............................................... len:21 al:182
......................CAAUGUUUCGGCUUGUUaCCG............................................... len:21 al:6
......................CAAUGUUUCGGCUUGUUCCCGc.............................................. len:22 al:41
......................CAAUGUUUCGGCUUGUUCCCGUUc............................................ len:24 al:1
......................CAAUaUUUCGGCUUGUUCCCG............................................... len:21 al:30
......................CAAUGUUUCGGCUUGgUCCCG............................................... len:21 al:4
......................CAAUGUUaCGGCUUGUUCCCG............................................... len:21 al:11
......................CAAUGUUUCaGCUUGUUCCCG............................................... len:21 al:48
......................CAAUGgUUCGGCUUGUUCCCG............................................... len:21 al:16
......................CAgUGUUUCGGCUUGUUCCCGU.............................................. len:22 al:2
......................CAAUGUUUCGGCUUGUUCCCGUg............................................. len:23 al:4
......................CAAUGUUUCGGCUUGUcCCCGU.............................................. len:22 al:1
......................CAAUGUUUCGGCUUGUUCCCGU.............................................. len:22 al:313
......................CAAUGcUUCGGCUUGUUCCCG............................................... len:21 al:259
......................CAAUGUUUCGGCUUGUUCCCGUU............................................. len:23 al:363
......................CAAUGUUUCGGCUUGUUCuCG............................................... len:21 al:58
......................CAAUGUUUCGGgUUGUUCCCG............................................... len:21 al:1
......................CAuUGUUUCGGCUUGUUCCCG............................................... len:21 al:4
......................CAAUGUUUCGGCcUGUUCCCGU.............................................. len:22 al:4
......................CAAUGUUUCGGCUUaUUCCCG............................................... len:21 al:57
......................CAAUGUUUCGGCUUGUUCu................................................. len:19 al:1
......................CAAUGUUgCGGCUUGUUCCCG............................................... len:21 al:6
......................CAAUGUaUCGGCUUGUUCCCGU.............................................. len:22 al:3
......................CAAUGUUUCGGCUUGUaCCCG............................................... len:21 al:10
......................CAAUGUUUCGGCUUGUUCCa................................................ len:20 al:2
......................CAAUGUUUCGGCUUGUUCCCGaU............................................. len:23 al:4
......................CAAUGUUUCGGCUUGcUCCCGUU............................................. len:23 al:2
......................CAAcGUUUCGGCUUGUUCCCG............................................... len:21 al:147
......................CAAUGUUUCGGCUUGUaCCCGUU............................................. len:23 al:2
......................CAAUGUUUCGGCUUGUUCCCG............................................... len:21 al:59917
......................CAAUGUUUCGGaUUGUUCCCG............................................... len:21 al:4
......................CAAUGaUUCGGCUUGUUCCCG............................................... len:21 al:8
......................CAAUGUUUCGGCUgGUUCCCG............................................... len:21 al:4
......................CAAcGUUUCGGCUUGUUCCCGU.............................................. len:22 al:3
......................CAAUGUgUCGGCUUGUUCCCGU.............................................. len:22 al:1
......................CAAUGUUcCGGCUUGUUCCCG............................................... len:21 al:145
......................CAAUGUUUCGGCUUGUUgCCG............................................... len:21 al:2
......................CAAUGUUUCGGCUUGUUCCCGg.............................................. len:22 al:4
......................CAAUGUUUCGGCUUGaUCCCG............................................... len:21 al:6
......................CgAUGUUUCGGCUUGUUCCCGUU............................................. len:23 al:2
......................CAAUGUUaCGGCUUGUUCCCGU.............................................. len:22 al:1
......................CAAUGUUUCGGCUcGUUCCCGUU............................................. len:23 al:2
......................CAAUGUUUCGGCUUGUUuCCG............................................... len:21 al:53
......................CAAUGUUUCGGCUcGUUCCCGU.............................................. len:22 al:2
......................CAAUGUUUCGGCUUGUUCCaG............................................... len:21 al:8
......................CAAUGUUUCGGCUUGUUCCaGU.............................................. len:22 al:9
......................CAAUGUcUCGGCUUGUUCCCG............................................... len:21 al:202
......................CAAUGUUUCGGCgUGUUCCCG............................................... len:21 al:6
......................CAAUGUUUCGGCaUGUUCCCG............................................... len:21 al:17
......................CAAUGUgUCGGCUUGUUCCCG............................................... len:21 al:2
......................CAAUGUUUaGGCUUGUUCCCG............................................... len:21 al:11
......................CAAUGUUUuGGCUUGUUCCCG............................................... len:21 al:63
......................CAAUGUUUCGGCUUGcUCCCGU.............................................. len:22 al:1
......................CAAUGUcUCGGCUUGUUCCCGUU............................................. len:23 al:1
......................CAAUGUUUCcGCUUGUUCCCG............................................... len:21 al:2
......................CAAUGUUUCGGCUUGUUCCCGUc............................................. len:23 al:22
......................CAAUGUUUCGGCUcGUUCCCG............................................... len:21 al:211
......................CAAUGUUUCGGCUUGUUCCCGcU............................................. len:23 al:4
......................CAAUGUUUCGaCUUGUUCCCG............................................... len:21 al:40
......................CAcUGUUUCGGCUUGUUCCCG............................................... len:21 al:5
......................CAAUGUUUCGGCUUGUUCCC................................................ len:20 al:73
......................CgAUGUUUCGGCUUGUUCCCGU.............................................. len:22 al:4
......................CgAUGUUUCGGCUUGUUCCCG............................................... len:21 al:219
......................CAAUGUUUCGGCUUGUUCCuG............................................... len:21 al:77
......................CAAUcUUUCGGCUUGUUCCCG............................................... len:21 al:1
......................CAAUGUUUCGGgUUGUUCCCGUU............................................. len:23 al:1
......................CAAUGUUUCGGuUUGUUCCCG............................................... len:21 al:53
......................CAAUGUUUCGGCUUGUUCCCGUa............................................. len:23 al:50
......................CAgUGUUUCGGCUUGUUCCCGUU............................................. len:23 al:1
......................CAAUGUUUCGGCUUGUUCCu................................................ len:20 al:26
......................CAAUGUUUCGGCUaGUUCCCG............................................... len:21 al:14
......................CcAUGUUUCGGCUUGUUCCCG............................................... len:21 al:4
......................CAAUGUUUCGGCUUGUUCaCG............................................... len:21 al:78
......................CAAUGUcUCGGCUUGUUCCCGU.............................................. len:22 al:1
......................CAAgGUUUCGGCUUGUUCCCG............................................... len:21 al:8
......................CAAUGUUUCGGCUUGUUCCgG............................................... len:21 al:28
......................CAAUGUUUCGGCUUGUUCCCGUUUU........................................... len:25 al:1
......................CAAUGUaUCGGCUUGUUCCCG............................................... len:21 al:14
......................CAAUGUUUCGcCUUGUUCCCG............................................... len:21 al:4
......................CAAaGUUUCGGCUUGUUCCCG............................................... len:21 al:14
......................CAAUGUUUCGGCcUGUUCCCGUU............................................. len:23 al:1
......................CAgUGUUUCGGCUUGUUCCCG............................................... len:21 al:155
......................CAAUGUUUCGGCUUGUUCCCGUUU............................................ len:24 al:14
......................CAAUGUUUgGGCUUGUUCCCG............................................... len:21 al:4
......................CAAUGUUUCGuCUUGUUCCCG............................................... len:21 al:8
......................CAAUGUUUCGGCUUGUUCCCGgU............................................. len:23 al:5
......................CAAUGUUUCGGCUUGUcCCCG............................................... len:21 al:190
......................CAAUGUUUCGGCUUGUUCC................................................. len:19 al:6
.......................AAUGUUUCGGCUUGUUCCCGUU............................................. len:22 al:1
.......................AAUGUUUCGGCUUGUUCCCG............................................... len:20 al:1
........................AUGUUUCGGCUUGUUCCCGUU............................................. len:21 al:1
.........................UGUUUCGGCUUGUUCCCGUUUUCGGGAu..................................... len:28 al:4
.........................UGUUUCGGCUUGUUCCCGUUUcCGGGAACA................................... len:30 al:3
.........................UGUUUCGGCUUGUUCCCGUUUUCGGGAgC.................................... len:29 al:1
.........................UGUUUCGGCUUGUUCCCGUUUUCGGGAA..................................... len:28 al:2
.........................UGUUUCGGCUUGUUCCCGUUUUCGGGAgCA................................... len:30 al:1
.........................UGUUUCGGCUUGUUCCCGUUUUCGGGAACu................................... len:30 al:10
.........................UGUUUCGGCUUGUUCCCGUUUcCGGGAA..................................... len:28 al:3
.........................UGUUUCGGCUUGUUCCCGUUUUCGGGAACA................................... len:30 al:13
.........................UGUUUCGGCUUGUUCCCGUUUUCGGGAACg................................... len:30 al:1
.........................UGUUUCGGCUUGUUCCCGUUUUCGGGAAC.................................... len:29 al:1
.........................UGUUUCGGCUUGUUCCCGUUUUCGGGAAu.................................... len:29 al:11
..........................GUUUCGGCUUGUUCCCGUUUUCGGGAACu................................... len:29 al:2
...........................UUUCGGCUUGUUCCCGUUUUCGGGAACA................................... len:28 al:7
...........................UUUCGGCUUGUUCCCGUUUUCGGGAA..................................... len:26 al:3
...........................UUUCGGCUUGUUCCCGUUUcCGGGAA..................................... len:26 al:2
.................................................GGAACAAGCCGAAACAUUUGA.................... len:21 al:4
.................................................GGAACAAGCCGAAACAUUUGAuU.................. len:23 al:2
.................................................GGAACAAGCCGAAACAUUUGAaU.................. len:23 al:17
..................................................GAACAAGCCGAAACAUUUGA.................... len:20 al:2
..................................................GAACAAGCCGAAACAUUU...................... len:18 al:2
......................................................................CUUUUGUCUGCCAAUAUAC. len:19 al:6