Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_730:82401-82494 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_7658.ps.pdf
Locus Name: Cluster_7658
UCAACAGUAAAACUAACAAAACGCUAACUGUAAAACUAACAAGUUCAACUUGUUAGUUUACAGUUAGUGUUUUGUUAGCCUGGCUCAAACCCUG
.....(((....((((((((((((((((((((((.(((((((((...)))))))))))))))))))))))))))))))....)))......... (-42.20)
.CAACAGUAAAACUAACAAA.......................................................................... len:19 al:1
..................AAACGCUAACUGUAAAACUAACA..................................................... len:23 al:1
...................AACGCUAACUGUAAAACUAACAAG................................................... len:24 al:3
...................AACGCUAACUGUAAAACUAACAAGUU................................................. len:26 al:1
...................AACGCUAACUGUAAAACUAACA..................................................... len:22 al:8
...................AACGCUAACUGUAAAACUAACg..................................................... len:22 al:1
...................AACGCUAACcGUAAAACUAACA..................................................... len:22 al:1
...................AACGCUAACUGUAAAACU......................................................... len:18 al:1
....................ACGCUAACUGUAAAACUgACA..................................................... len:21 al:1
....................ACGCUAACgGUAAAACUAACAAG................................................... len:23 al:1
....................gCGCUAACUGUAAAACUAACAAGU.................................................. len:24 al:2
....................ACGuUAACUGUAAAACUAACAAG................................................... len:23 al:2
....................ACGCUAACUGUAAAACUAACAA.................................................... len:22 al:1
....................ACGCUAACUGUAAAACUAACAAG................................................... len:23 al:189
....................ACGCUAACUGUAAAACUAACAgGU.................................................. len:24 al:1
....................ACGCUAgCUGUAAAACUAACA..................................................... len:21 al:1
....................ACGCUAACUGUAAAACUAACAAGUUCAACc............................................ len:30 al:1
....................ACGCcAACUGUAAAACUAACA..................................................... len:21 al:3
....................ACGCUAACUGUAAAACUAACAAGUUCAACUU........................................... len:31 al:4
....................ACGaUAACUGUAAAACUAACA..................................................... len:21 al:1
....................ACGCUAACUGUgAAACUAAC...................................................... len:20 al:1
....................ACGCUAACUGUAAAACUAgCAAG................................................... len:23 al:1
....................ACGCUAACUGUAAAACgAACAAGU.................................................. len:24 al:1
....................ACGCUAACUGUAAAACUAACAAGU.................................................. len:24 al:95
....................ACGCUAgCUGUAAAACUAACAAG................................................... len:23 al:1
....................ACGCUAACUGUAAAACUAACgAGU.................................................. len:24 al:1
....................ACGCUgACUGUAAAACUAACAAG................................................... len:23 al:2
....................ACGCUAAuUGUAAAACUAACAAGU.................................................. len:24 al:1
....................ACGCUAACUGUAAgACUAACAAGU.................................................. len:24 al:1
....................ACGCUAACUGUAAAACUAgC...................................................... len:20 al:1
....................ACGCcAACUGUAAAACUAACAAG................................................... len:23 al:1
....................ACGCUAACUGUAAAgCUAACAAG................................................... len:23 al:2
....................ACGCUAACUGUAgAACUAACA..................................................... len:21 al:1
....................ACGCUAACUGUAAAACUAACAAu................................................... len:23 al:3
....................ACGCUAACUGUAAAACUAACAAGUU................................................. len:25 al:9
....................ACGCUAACUGcAAAACUAACAAGU.................................................. len:24 al:1
....................ACGCUAACUGUAAAACUAgCAAGU.................................................. len:24 al:1
....................ACGCUAACUGUAAAAC.......................................................... len:16 al:1
....................ACGCUAACUGUAAAACUAACAAuU.................................................. len:24 al:1
....................ACGCUAACUGUAAAACUAACgAG................................................... len:23 al:2
....................ACGCUAACUGUAAAACUAAu...................................................... len:20 al:2
....................ACGCUAACUGUAAAACUAACAAGUUCAACa............................................ len:30 al:2
....................ACGCUAACUGUAAAACUA........................................................ len:18 al:1
....................ACGCUAACUGUAAAACUAACAAGc.................................................. len:24 al:10
....................ACGCUAACUGUAAAACUAACAAGa.................................................. len:24 al:3
....................ACGCUAACUGUAAAACUAACAAa................................................... len:23 al:5
....................ACGCUAACUGUAAAACUAACAgG................................................... len:23 al:1
....................ACGCUgACUGUAAAACUAACA..................................................... len:21 al:3
....................ACGCUAACUGUAAAACcAACAAG................................................... len:23 al:1
....................gCGCUAACUGUAAAACUAACAAG................................................... len:23 al:1
....................ACGCUAACUGUAAAACUAACAAGgU................................................. len:25 al:1
....................gCGCUAACUGUAAAACUAAC...................................................... len:20 al:1
....................ACGCUAACUGUAAAACUAACAAGUUCAAC............................................. len:29 al:1
....................ACGCUAgCUGUAAAACUAACAAGU.................................................. len:24 al:1
....................ACGCUAACUGUgAAACUAACA..................................................... len:21 al:1
....................ACGCUAACUGUAAAACUAACA..................................................... len:21 al:212
....................ACGCUAACUGUAAAACUAACAgGUUCAACU............................................ len:30 al:1
....................ACGCUAACUGUAAAACUAAC...................................................... len:20 al:63
....................AuGCUAACUGUAAAACUAACAAG................................................... len:23 al:1
....................ACGCUAACUGcAAAACUAACA..................................................... len:21 al:1
....................ACGuUAACUGUAAAACUAACA..................................................... len:21 al:1
....................ACGCUAACUGUAAAACUAA....................................................... len:19 al:7
....................ACGCUAACUGUAAAACUAgCA..................................................... len:21 al:1
....................ACGCUAACUGUAAAACUAACAAGUUCAACU............................................ len:30 al:12
.....................CGCUAACUGUAAAACUAACAAG................................................... len:22 al:1
.....................CGCUAACUGUAAAACUAACA..................................................... len:20 al:1
.....................CGCUAACUGUAAAACUAAC...................................................... len:19 al:1
......................GCUAACUGUAAAACUAAC...................................................... len:18 al:1
.......................CUAACUGUAAAACUAACAAG................................................... len:20 al:2
..................................................UGUUAGUUUACAGUcAGUGUUU...................... len:22 al:1
..................................................UGUUAGUUUACAGUUgGUGUUUU..................... len:23 al:1
..................................................cGUUAGUUUACAGUUAGUGUUUU..................... len:23 al:1
..................................................UGUUAGUUUACAGUUgGUGUU....................... len:21 al:1
..................................................UGUUAGUUUACAGUUAGc.......................... len:18 al:5
..................................................UGUUAGUUUACAGcUAGUGUUU...................... len:22 al:2
..................................................UGUUAGUUcACAGUUAGUGUUU...................... len:22 al:1
..................................................UGUUAGUUUACAGUUAGUGUc....................... len:21 al:3
..................................................UGUUAGUUUACAGUUAGUGUUUU..................... len:23 al:71
..................................................UGcUAGUUUACAGUUAGUGUU....................... len:21 al:2
..................................................UGUUAGUUUACAGUUAGUGaU....................... len:21 al:1
..................................................UGUUAGUcUACAGUUAGUGUUUU..................... len:23 al:1
..................................................UGUUAGUUUACAGUUAGUGUUU...................... len:22 al:299
..................................................UGUUAGUUUACAGUUAGUGgU....................... len:21 al:1
..................................................UGUUgGUUUACAGUUAGUG......................... len:19 al:1
..................................................UGUUgGUUUACAGUUAGUGUUUU..................... len:23 al:1
..................................................UGUUAGUUUACAGUUAGUG......................... len:19 al:17
..................................................UGUUAGUUUACAGUUAGUGc........................ len:20 al:3
..................................................UGUUAGUUUACAGUUAGU.......................... len:18 al:30
..................................................UGUcAGUUUACAGUUAGUGUUU...................... len:22 al:1
..................................................UGUUAGcUUACAGUUAGUGUU....................... len:21 al:1
..................................................UGUUAGUUUACAGUUAGUGUcU...................... len:22 al:2
..................................................UGUUAGUUUACAGUUAaUGUUU...................... len:22 al:1
..................................................UGcUAGUUUACAGUUAGUGUUU...................... len:22 al:1
..................................................UGUUAGUUUACAGUUAGUGUUaU..................... len:23 al:1
..................................................UGUUAGcUUACAGUUAGUGUUUU..................... len:23 al:1
..................................................UGUUAGUUUACAGUUgGUGUUU...................... len:22 al:2
..................................................UGUUAGUUUACgGUUAGUGUUU...................... len:22 al:3
..................................................UGUUAGUUUACAGUUAGcGUUUU..................... len:23 al:1
..................................................UGUUAGUUUACAGUUAGUGUUUa..................... len:23 al:4
..................................................UGUUAGUUUACAGUUAGUGUgU...................... len:22 al:1
..................................................cGUUAGUUUACAGUUAGUGUU....................... len:21 al:1
..................................................UGUUgGUUUACAGUUAGUGU........................ len:20 al:1
..................................................UGUUAGUUUACuGUUAGUGUU....................... len:21 al:1
..................................................UGUUAGUUUACAGUUAGUGUUUc..................... len:23 al:5
..................................................UGUUAGUUUACAGUUAGUGUUc...................... len:22 al:24
..................................................UGUUAGUUUgCAGUUAGUGUUU...................... len:22 al:1
..................................................UGUUAGcUUACAGUUAGU.......................... len:18 al:1
..................................................UGUUgGUUUACAGUUAGUGUUU...................... len:22 al:1
..................................................UGUUAGUUUACAGUUAGUGUU....................... len:21 al:112
..................................................UGUUAGUUUgCAGUUAGUGUUUU..................... len:23 al:2
..................................................UGUUAGUUUACAGUUAGUGUUUUu.................... len:24 al:9
..................................................UGUUAGUUUACAGUUAGUGU........................ len:20 al:32
...................................................GUUAGUUUACAGUUAGUGUUU...................... len:21 al:4
...................................................GUUAGUUUACAGUUAGUGUU....................... len:20 al:5