Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_502:58948-59038 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_6255.ps.pdf
Locus Name: Cluster_6255
GACUAAAGAGCUUGACCGGUUAGCAUAACAUUGUAAGAGAUCUUUAAGACCUCUUGCAUUGUUAUGCUGCCUGGGAAAGCUUCAUGUACGU
.......((((((..((((.((((((((((.((((((((.(((...))).)))))))).)))))))))).))))..))))))......... (-42.00)
GACUAAAGAGCUUGACCGGU....................................................................... len:20 al:4
.ACUAAAGAGCUUGACCGGc....................................................................... len:19 al:3
.ACUAAAGAGCUUGACCGGU....................................................................... len:19 al:8
..CUAAAGAGCUUGACCGGU....................................................................... len:18 al:1
....................UgGCAUAACAUUGUAAG...................................................... len:17 al:3
....................UAGCAUAACAUUGUAAGAGgUC................................................. len:22 al:2
....................UAGCAUAACAUUGUAAGAGAUCUUUAAGA.......................................... len:29 al:2
....................UAGCAUAACAUUGUAAGAGAUC................................................. len:22 al:1
....................cAGCAUAACAUUGUAAG...................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCa................................................ len:23 al:32
....................UAGCAUAACAUUGUAAG...................................................... len:17 al:345
....................UAGCAUAACAUUGUAAGA..................................................... len:18 al:9
....................UAGCAUgACAUUGUAAGAGAUCU................................................ len:23 al:1
....................UAGCAUAgCAUUGUAAGAGAUC................................................. len:22 al:1
....................UAGCAUAACgUUGUAAG...................................................... len:17 al:4
....................UAGCAUAACgUUGUAAGAGAUCU................................................ len:23 al:1
....................UAGCAUAACAUUGUAAGAGAcC................................................. len:22 al:3
....................aAGCAUAACAUUGUAAG...................................................... len:17 al:4
....................UgGCAUAACAUUGUAAGAGAUCU................................................ len:23 al:1
....................UAGCAUAACAUUGUAAGAGAUu................................................. len:22 al:21
....................aAGCAUAACAUUGUAAGAGAU.................................................. len:21 al:1
....................UAGCAaAACAUUGUAAG...................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGA................................................... len:20 al:3
....................UAGCAUAACAUcGUAAG...................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAG.................................................... len:19 al:1
....................UAGCAUAACAUUGUAAGAGAU.................................................. len:21 al:9
....................UAGCAUAACAUUGUAAGAGAg.................................................. len:21 al:1
....................UAGCAUAACAUUGUAAGAGAUCU................................................ len:23 al:51
....................UAGCAUAACAUUGUAAGAGAUa................................................. len:22 al:4
....................UAGaAUAACAUUGUAAG...................................................... len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCc................................................ len:23 al:16
....................UAGCAUAACAgUGUAAGAGAUCU................................................ len:23 al:1
.....................................AGAUCUUUgAGACCUCUU.................................... len:18 al:2
.................................................CCUCUUGCAUUGUUAUGCUGCC.................... len:22 al:4