Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_257:110308-110402 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_4115.ps.pdf
Locus Name: Cluster_4115
GAAACAGUGUUUGAUAUACUCUCCUAUUGAUGCUGUGAUUAAUCCUUAGAAUUAAGCACAACAUUAAUAGGAGUAGUUUAUUGAACAAAUACAAU
.......(((((((((.(((((((((((((((.((((.(((((.......))))).)))).)))))))))))).))).)))))))))........ (-32.70)
.AAACcGUGUUUGAUAUACU........................................................................... len:19 al:2
..AACcGUGUUUGAUAUACUC.......................................................................... len:19 al:16
..AACuGUGUUUGAUAUACUC.......................................................................... len:19 al:1
..................CUCUCCUAUUGAUGCUGU........................................................... len:18 al:2
...................UCUCCUgUUGAUGCUGUGAU........................................................ len:20 al:1
...................UCUCCUAUUGAUGCUGUGAUUAuU.................................................... len:24 al:7
...................UCUCCUAUgGAUGCUGUGAU........................................................ len:20 al:1
...................UCUCCUAUUGAUGCUGUGAUUAcU.................................................... len:24 al:1
...................UCUCCUgUUGAUGCUGUGAUU....................................................... len:21 al:1
...................UCUCCUAUUGAUGCUGUGAaU....................................................... len:21 al:1
...................UCUCuUAUUGAUGCUGUGAU........................................................ len:20 al:2
...................UCUCCUAUUGAUGCUGUGAUaA...................................................... len:22 al:10
...................UCUCCUAUUGAUGCUGUGAUUAAc.................................................... len:24 al:1
...................UCUCCUAUUGAUGCUcUGA......................................................... len:19 al:3
...................UCUCCUAUUGAUGCUGUGAUUAc..................................................... len:23 al:2
...................UCUCCUAcUGAUGCUGUGAUU....................................................... len:21 al:1
...................UCUCCUAUUGAUGCUGUG.......................................................... len:18 al:11
...................UCcCCUAUUGAUGCUGUGAUU....................................................... len:21 al:2
...................aCUCCUAUUGAUGCUGUGAUUAAU.................................................... len:24 al:1
...................UCUCCUAUUGAUGCUGUGAUUA...................................................... len:22 al:19
...................UCUCCUAUUGAUGCUGUGAUc....................................................... len:21 al:7
...................UCUCCUAUUGAUGCUGUGAUUc...................................................... len:22 al:1
...................UCUCCUAUUGAUGCUGUGAU........................................................ len:20 al:162
...................UCUCCUAUUGAcGCUGUGAUU....................................................... len:21 al:1
...................UCcCCUAUUGAUGCUGUGAU........................................................ len:20 al:2
...................UCUCCUAUUGAUGCUGUGAUUAu..................................................... len:23 al:24
...................UCUCCUAUUGAUGCUGUa.......................................................... len:18 al:3
...................UCUCCUAUUGAUGCUcUGAUU....................................................... len:21 al:1
...................UCUCCUAUUGAUGCUGUGAUUAAU.................................................... len:24 al:23
...................UCUCCUAUUGAUGCUGUGAUUAA..................................................... len:23 al:6
...................UCUaCUAUUGAUGCUGUGAUU....................................................... len:21 al:1
...................UCUCCUAUUGAUGCUGUGAa........................................................ len:20 al:4
...................UCUCCUAUUGAUGCUGUGAUUgA..................................................... len:23 al:2
...................UCUCCUAUUGAUGCUGUGAUU....................................................... len:21 al:110
...................UCUCCcAUUGAUGCUGUGAUUAAU.................................................... len:24 al:1
...................UCUCCUAUUGAUGCUGUGAg........................................................ len:20 al:4
...................UCUCCUAUUGAUGCcGUGAUUA...................................................... len:22 al:2
...................UCUCCUAUUGAUGCUGUGA......................................................... len:19 al:1
...................UCUCCUAUUGAUGCUGUGAUUAAUC................................................... len:25 al:1
...................UCUCCUAUUGgUGCUGUGAU........................................................ len:20 al:1
...................UCUCCUAUUGAUGCUGU........................................................... len:17 al:2
...................UCUCCUAUUGAUGCUGUGAUa....................................................... len:21 al:1
...................UCUCCUAUUGAUGCUGUGgU........................................................ len:20 al:2
...................UCUCCUAUUGAUGCUGUGAUUgAU.................................................... len:24 al:1
...................UCUCCUAUUGAUGCUGUGAc........................................................ len:20 al:15
...................UCUCCUAUUGAUGCUGUGAUUAAUu................................................... len:25 al:2
...................UCUCCUAUUGAUGCUGUGAUUu...................................................... len:22 al:3
....................CcCCUAUUGAUGCUGUGAU........................................................ len:19 al:1
....................CUCCUAUUGAUGCUGUGAU........................................................ len:19 al:245
....................CUCCUAUUGAUGCUGUGAc........................................................ len:19 al:22
....................CUCCUAUUGAUGCUGUGAUUAgU.................................................... len:23 al:1
....................CUCCgAUUGAUGCUGUGAUUA...................................................... len:21 al:1
....................uUCCUAUUGAUGCUGUGAUU....................................................... len:20 al:1
....................CUCCUAUUGAUGCUGUGAg........................................................ len:19 al:1
....................CUCCUAUUGAUGCUGUGAUUAg..................................................... len:22 al:5
....................CUCCUAUUaAUGCUGUGAUUAAU.................................................... len:23 al:1
....................CUCCUAUUGAUGCcGUGAUU....................................................... len:20 al:4
....................CUCCUAUUGAUGCUGUGAUUAcU.................................................... len:23 al:4
....................CUCCUgUUGAUGCUGUGAU........................................................ len:19 al:5
....................CUCCUAUcGAUGCUGUGAUUAAU.................................................... len:23 al:1
....................CUCCUAUUGAUGCUGUGAUUgAU.................................................... len:23 al:4
....................CUCCUAUUGAUGCcGUGAU........................................................ len:19 al:3
....................CUCCUAUUGAUGCUGUGAUUAAUCCUUAGA............................................. len:30 al:1
....................CUCCUAUUGAUGCUGUaAUUAAU.................................................... len:23 al:1
....................CUCCUAUUGAUGCUGUGAUUAAUCC.................................................. len:25 al:1
....................CUCCUAUUGAUGCUGUGAUUAAa.................................................... len:23 al:1
....................CUCCUAUUGAUGCUGUGAgU....................................................... len:20 al:2
....................CUCCUAUUGAUGCUGUGAUUc...................................................... len:21 al:6
....................CUCCUAUUGAUGCUGUGAUUAAc.................................................... len:23 al:28
....................CaCCUAUUGAUGCUGUGAUUAAU.................................................... len:23 al:1
....................CUCCUAUUGAUGCUGUGAUc....................................................... len:20 al:32
....................CUCCUAUUGAUaCUGUGAUUAAU.................................................... len:23 al:2
....................CUuCUAUUGAUGCUGUGAU........................................................ len:19 al:7
....................CUCCUAUUGAUGCUGUGAUUgA..................................................... len:22 al:13
....................CUCCUAUUGAUGCUGUGAUUAAUCCUU................................................ len:27 al:8
....................CUCCUAUUGAUGuUGUGAUU....................................................... len:20 al:3
....................CUCCUAUUGAUGCUGUGAUgAAU.................................................... len:23 al:1
....................CUCCUAUUGAUGCUGUGAUU....................................................... len:20 al:335
....................CUCCUAUUGAUGCUGUGA......................................................... len:18 al:30
....................CUCCUAUUGAUGCUGUGAUUu...................................................... len:21 al:30
....................CUCCUAUUGAUGCUGUGc......................................................... len:18 al:1
....................CUCCUAUUGAUGCUGUGAcUAAU.................................................... len:23 al:3
....................CUCCUAUUGAUGCUGUGAUUAAUC................................................... len:24 al:4
....................CUCCcAUUGAUGCUGUGAU........................................................ len:19 al:1
....................CUCCUAUUGAUGCUGUGAUUAAUCCc................................................. len:26 al:1
....................CUCCUAUUGAcGCUGUGAUUAA..................................................... len:22 al:1
....................CUCCUAUUGAUGCcGUGAUUAAU.................................................... len:23 al:1
....................CUCCUAUUGgUGCUGUGA......................................................... len:18 al:1
....................CUCCUAUUGAUGCUGUGgU........................................................ len:19 al:1
....................CUCCUAUUGAUGCUGUGAUUAA..................................................... len:22 al:83
....................CUCCUAUUGAUGCUGUGAUUAu..................................................... len:22 al:104
....................CUCCUAUUGAUGCUGUa.......................................................... len:17 al:1
....................CUCCUAUUGAUGCUGaGAUUAAU.................................................... len:23 al:2
....................CUCCUAUUaAUGCUGUGAUU....................................................... len:20 al:2
....................CUCCUAUUGAUGCUGUGgUUAA..................................................... len:22 al:1
....................CUCCUAUUGAUGCUGUGAUUAuU.................................................... len:23 al:20
....................CUCCUAUUGAUGCUGUGAUUA...................................................... len:21 al:104
....................CUCCUAUcGAUGCUGUGAU........................................................ len:19 al:2
....................CUCCUAUUGAUGCUGU........................................................... len:16 al:6
....................CUCCUAUUGAUGCUGUGAUUAAUu................................................... len:24 al:13
....................CUCCUAUUGAUGCcGUGAUUA...................................................... len:21 al:1
....................CUCCUAUUGAUGCUGUGAUUAAUCCU................................................. len:26 al:2
....................CUCCUAUUGAUGCUGUGAUUAAg.................................................... len:23 al:1
....................CUCCUAUUGgUGCUGUGAUUAAU.................................................... len:23 al:3
....................CUCCUgUUGAUGCUGUGAUUA...................................................... len:21 al:1
....................CUCCUAUUGAUGCUGUGAUUAAU.................................................... len:23 al:465
....................CUCCUAUUGAUGCUGUGg......................................................... len:18 al:1
....................CUCCUAUUGAUGCUGUGAUUAc..................................................... len:22 al:12
....................CUCCUAUUGgUGCUGUGAUU....................................................... len:20 al:8
....................CUCCUAUUGAcGCUGUGA......................................................... len:18 al:1
....................CUCCUAUUGAUGCUGcGAUU....................................................... len:20 al:1
....................CUCCUAUUGAUGCUGUGgUUAAU.................................................... len:23 al:1
....................CUCCUAUUGAUGCaGUGAUUAAU.................................................... len:23 al:1
....................CUCCUAUUGAUGCUGcGA......................................................... len:18 al:2
....................CUCCUAUUGAUGCUGcGAUUAAU.................................................... len:23 al:1
....................CUCCUAUUGAUGCcGUGAUUAA..................................................... len:22 al:1
....................CUCCUAUUGAcGCUGUGAUU....................................................... len:20 al:1
....................CUCCUAcUGAUGCUGUGAU........................................................ len:19 al:1
....................CUCCUAcUGAUGCUGUGAUUAAU.................................................... len:23 al:1
.....................UCCUAUUGAUGCUGUGAUUAAUu................................................... len:23 al:1
.....................cCCUAUUGAUGCUGUGAUU....................................................... len:19 al:1
.....................UCCUAUUGAUGCUGUGAUUAAU.................................................... len:22 al:38
.....................UCCUAUUGAUGCUGUGAc........................................................ len:18 al:6
.....................UCCUAUUGAUGCUGUGAUUgA..................................................... len:21 al:1
.....................UCCUAUUGAUGCUGUGAUUAAc.................................................... len:22 al:2
.....................UCCUAUUGAUGCUGUGAUUAAg.................................................... len:22 al:1
.....................UCCUAUUGAUGCUGUGAUUgAU.................................................... len:22 al:1
.....................UCCUAUUGAUGCUGUGAUUA...................................................... len:20 al:3
.....................UCCUAUUGAUGCUGUGAUUAgU.................................................... len:22 al:3
.....................UCCUAUUGAUGCUGUG.......................................................... len:16 al:1
.....................UCCUAUUGAUGCaGUGAUU....................................................... len:19 al:1
.....................UCCUAUUGAUGCUGUGAUU....................................................... len:19 al:20
.....................UCCUgUUGAUGCUGUGAUUAAU.................................................... len:22 al:1
.....................UCCUAUUGAUGCUGUGAU........................................................ len:18 al:27
.....................UCCUAUUGAUGCUGUGAUUAu..................................................... len:21 al:10
.....................UCCUAUUGAUGCUGUGAUUAA..................................................... len:21 al:1
.....................UCCUAUUGAUGCUGUGAUUAc..................................................... len:21 al:1
.....................UCCUAUUGAUGCUGUGAUUAuU.................................................... len:22 al:2
.....................UCCUAUUGAUGCUGUGAg........................................................ len:18 al:2
......................CCUAUUGAUGCUGUGAUUAAc.................................................... len:21 al:1
......................CCUAUUGAUGCUGUGAUUAu..................................................... len:20 al:1
......................CCUAUUGAUGCUGUGAUU....................................................... len:18 al:1
......................CCUAUUGAUGCUGUGAUUAAU.................................................... len:21 al:1
......................CCUAUUGAUGCUGUGAUUAA..................................................... len:20 al:2
......................CCUAUUGAUGCUGUGAUUAcU.................................................... len:21 al:1
.......................CUAUUGAUGCUGUGAUUAu..................................................... len:19 al:2
.......................CUAUUGAUGCUGUGAUUA...................................................... len:18 al:2
.......................CUAUUGAUGCUGUGAUUAAU.................................................... len:20 al:13
.......................CUAUUGAUGCUGUGAU........................................................ len:16 al:1
.......................CUAUUGAUGCUGUGAUUAgU.................................................... len:20 al:1
........................UAUUGAUGCUGUGAUUAAUCC.................................................. len:21 al:15
........................UAUUGAUGCUGUGAUUAAUCCUUA............................................... len:24 al:2
........................UAUUGAUGCUGUGAUUAAU.................................................... len:19 al:23
........................UAUUGAUGCUGUGAUUAAUCCa................................................. len:22 al:2
........................UAUUGAUGuUGUGAUUAAUCCUUAG.............................................. len:25 al:1
........................UAUUGAUGCUGUGAUUAAUC................................................... len:20 al:16
........................UAUUGAUGCUGUGAUUAAUCCUc................................................ len:23 al:3
........................UAUUGAUGCUGUGAUUAAUCCU................................................. len:22 al:7
........................UAUUGAUGCUGUGAUUAAUCCUU................................................ len:23 al:21
........................UAUUGAUGCUGUGAUUAAUCuU................................................. len:22 al:2
........................UAUUGAUGCUGUGAUUAAUCCUUAGA............................................. len:26 al:9
........................cAUUGAUGCUGUGAUUAAU.................................................... len:19 al:1
........................UAUUGAUGCUGUGAUUAAUCu.................................................. len:21 al:7
........................UAUUGAUGCUGcGAUUAAUCCUUAGAAUU.......................................... len:29 al:1
........................UAUUGAUGCUGcGAUUAAUCC.................................................. len:21 al:1
........................UAUUGAUGCUGUGAUUAAUCCUUAGAAUU.......................................... len:29 al:17
........................UAUUGAUGCcGUGAUUAAUCCUUAGAAUU.......................................... len:29 al:1
........................UAUUGAUGCUGUGAUUAAUCCUUAGAAU........................................... len:28 al:2
........................UAUUGAUGCUGUGAUUAAUCCUUAGAAUUA......................................... len:30 al:7
........................cAUUGAUGCUGUGAUUAAUCCUUAGAAUU.......................................... len:29 al:1
........................UAUUGAUGCUGUGAU........................................................ len:15 al:1
........................UAUUGAUGCUGUGAUUAu..................................................... len:18 al:5
........................UAUUGAUGCUGUGAUUAAUCCcUAGA............................................. len:26 al:1
........................UAUUGAUGCUGUGAUUAAUCCUUAG.............................................. len:25 al:5
........................aAUUGAUGCUGUGAUUAAUCCUUAGAAUUA......................................... len:30 al:1
........................UAUUGAUGCUGUGAUUAAUCCg................................................. len:22 al:1
........................UAUUGAUGCUGUGAUUA...................................................... len:17 al:2
........................UAUUGAUGCUGUGAUUAAc.................................................... len:19 al:1
........................UAUUGAUGCUGUGAUUAA..................................................... len:18 al:1
........................UAUcGAUGCUGUGAUUAAUC................................................... len:20 al:1
........................UAUUGAUGCUGUGAUUAc..................................................... len:18 al:1
........................UAUcGAUGCUGUGAUUAAUCCUU................................................ len:23 al:1
........................UAUUGAUGCUGUGAUUAAUCa.................................................. len:21 al:22
........................UAUUGAUGCUGUGAUUAAUuCUUAG.............................................. len:25 al:2
..........................UUGAUGCUGUGAUUAAUCC.................................................. len:19 al:1
..........................UUGAUGCUGUGAUUAAUCCUUAGAAUUu......................................... len:28 al:4
..........................UUGAUGCUGUGAUUAAUCCUUAGAAUUc......................................... len:28 al:1
..........................UUGAUGCUGUGAUUAAUCCUUAGAAUUAAGC...................................... len:31 al:1
..........................UUGAUGCUGUGAUUAAUC................................................... len:18 al:3
...........................UGgUGCUGUGAUUAAUCC.................................................. len:18 al:1
...........................UGAUGCUGUGAUUAAUCC.................................................. len:18 al:5
...........................UGAUGCUGUGAUUAAUCCU................................................. len:19 al:1
...........................UGAUGCUGUGAUUAAU.................................................... len:16 al:1
.............................AUGCUGUGAUUAAUCCUUAGAAUUAAGC...................................... len:28 al:3
..............................UGCUGUGAUUAAUCCUUAGAAUU.......................................... len:23 al:3
..............................UGCUGUGAUUAAUCCUUAGAAUUAAG....................................... len:26 al:1
.............................................UUAGAAUUAAGCACAACAUUAAUAGGAGUAc................... len:31 al:1
...............................................AGAAUUAAGCACAACAUUAAUAGGAGUAG................... len:29 al:1
.................................................AAUUAAGCACAACAUUAAUAGG........................ len:22 al:1
.................................................AAUUAAGCACAACAUUAAUAGu........................ len:22 al:3
.................................................AAUUAAGCACAACAUUAAUAGc........................ len:22 al:1
...................................................UUAAGCACAACAUUAAUAGGu....................... len:21 al:4
...................................................UUAAGCACAACAUUAAUAGGAG...................... len:22 al:1
...................................................UUAAGCACAACAUUAAUAGGAu...................... len:22 al:5
...................................................UUAAGCACAACAUUAAUAGGc....................... len:21 al:1
....................................................UAAGCACAACgUUAAUAGGAGUAG................... len:24 al:1
....................................................UgAGCACAACAUUAAUAGGAGUAG................... len:24 al:1
....................................................UAAGCACAgCAUUAAUAGGAGUAGU.................. len:25 al:3
....................................................UAAGCACAACAUUAAUAGGAGUAGaUU................ len:27 al:10
....................................................UAAGCACAACAUUAAUAGGAGUAu................... len:24 al:11
....................................................UAAGCACAACAUUAAUAGGAGgAGU.................. len:25 al:8
....................................................UAAGCgCAACAUUAAUAGG........................ len:19 al:1
....................................................UAAGCACgACAUUAAUAGG........................ len:19 al:3
....................................................UAAGCAaAACAUUAAUAGGA....................... len:20 al:1
....................................................UAAGCACAACgUUAAUAGG........................ len:19 al:1
....................................................UAAGCACAACAcUAAUAGGAG...................... len:21 al:1
....................................................UgAGCACAACAUUAAUAGGAGU..................... len:22 al:5
....................................................UAAGCACAACAUUAAUAGGAGUcG................... len:24 al:1
....................................................UAAGuACAACAUUAAUAGGAGU..................... len:22 al:7
....................................................UAAGCACAgCAUUAAUAGGAGUAG................... len:24 al:22
....................................................UAAGCACAACAUUAAUAGGAGUAGaU................. len:26 al:1
....................................................UAAGCACAACAcUAAUAGGA....................... len:20 al:3
....................................................UgAGCACAACAUUAAUAGG........................ len:19 al:7
....................................................UAAGCACAACAUUAAUAGu........................ len:19 al:20
....................................................UAAGCACAACAUUAgUAGGAGU..................... len:22 al:2
....................................................UAAGCAuAACAUUAAUAGGAGU..................... len:22 al:1
....................................................UAAGCACAACAUUAAUAGGAcU..................... len:22 al:6
....................................................UAgGCACAACAUUAAUAGGAGU..................... len:22 al:7
....................................................UAAGCACAACAUUAAUAG......................... len:18 al:18
....................................................UAAGCACAACAcUAAUAGGAGUAG................... len:24 al:2
....................................................UAAGCACAcCAUUAAUAGGAGU..................... len:22 al:1
....................................................UAAGCACAACAUUAAUgGGAGU..................... len:22 al:4
....................................................UAAGCACAACAUUAAUAc......................... len:18 al:2
....................................................UAAGCACAACAUUAAUAGGc....................... len:20 al:3
....................................................UuAGCACAACAUUAAUAGGAGUAG................... len:24 al:1
....................................................UAAGCACAACAUUAAUAGGgG...................... len:21 al:3
....................................................UAAGCACAACAUUgAUAGGAGUAG................... len:24 al:1
....................................................UAAGCACAACAUUAAUAGGuGUA.................... len:23 al:1
....................................................UAAGCACAACgUUAAUAGGAGU..................... len:22 al:2
....................................................aAAGCACAACAUUAAUAGGAGU..................... len:22 al:4
....................................................UAAGCACAACAUUAAUAGGAGUAuU.................. len:25 al:5
....................................................UAAGCACAgCAUUAAUAGG........................ len:19 al:4
....................................................cAAGCACAACAUUAAUAGGAGU..................... len:22 al:5
....................................................UAAGCACAACAUUgAUAGGA....................... len:20 al:1
....................................................UAAGCACAACAUUAAUAu......................... len:18 al:1
....................................................UAAGCACAACAUUAAUAGGAGg..................... len:22 al:59
....................................................UAAGCACAACAUUAAUAGGAGUAa................... len:24 al:23
....................................................UAAGCACAgCAUUAAUAGGAGUA.................... len:23 al:1
....................................................UAAGCACAACAUUAAUAGc........................ len:19 al:3
....................................................UAAGCACAACAUUAAUgGG........................ len:19 al:3
....................................................UAAGCACAACAUUAAUAGGAGUAc................... len:24 al:2
....................................................UAAGCACAACAUUAAUAGGg....................... len:20 al:7
....................................................UAAGCACAACAUUgAUAGGAG...................... len:21 al:1
....................................................UAAGCACgACAUUAAUAGGAGU..................... len:22 al:5
....................................................UAAGCACAACAUUAAUAGGAaUA.................... len:23 al:3
....................................................cAAGCACAACAUUAAUAGG........................ len:19 al:1
....................................................UAAGCACAACAUUAAUAGGAuU..................... len:22 al:57
....................................................aAAGCACAACAUUAAUAGGAGUA.................... len:23 al:1
....................................................UAAGCACAACAUUAAUAGuA....................... len:20 al:1
....................................................UAAGCACAACAUUAAUAGGAa...................... len:21 al:53
....................................................UAAGCACAACAUUAAUAuGAG...................... len:21 al:2
....................................................UAAGCACAACAUUAAUA.......................... len:17 al:2
....................................................UAAGCACAACAUUAAUgGGAG...................... len:21 al:1
....................................................UAAGCACAACAUUAAUAGGAGUAGa.................. len:25 al:5
....................................................UAAaCACAACAUUAAUAGG........................ len:19 al:2
....................................................UAAGCACAACAUUAAUAGGAc...................... len:21 al:10
....................................................UAAGCACAgCAUUAAUAGGAG...................... len:21 al:3
....................................................UAAGCACAAaAUUAAUAGGAGUAG................... len:24 al:1
....................................................UAAGCACAACAUUAuUAGGA....................... len:20 al:1
....................................................UAAGCACAACAUUAAUAGGuGU..................... len:22 al:2
....................................................UAAGCACAACAUUAAUAGGu....................... len:20 al:30
....................................................UAAGCACAACAUUAAUAGG........................ len:19 al:538
....................................................UAAGCACAACAcUAAUAGG........................ len:19 al:1
....................................................UAAGCACcACAUUAAUAGGAGU..................... len:22 al:1
....................................................UAAGCACAACAUcAAUAGG........................ len:19 al:2
....................................................cAAGCACAACAUUAAUAGGAG...................... len:21 al:2
....................................................UAAGCACAACAUUAAUAGGAGUAG................... len:24 al:396
....................................................UAAGCACAACAUUAgUAGGAG...................... len:21 al:1
....................................................UAAGCACAACAUUAAUAGGAGUg.................... len:23 al:1
....................................................UAAGCgCAACAUUAAUAGGAGUAG................... len:24 al:2
....................................................UAuGCACAACAUUAAUAGGA....................... len:20 al:1
....................................................UAAGCACAACAUUAAUgGGA....................... len:20 al:1
....................................................UAAGCACAACAUUgAUAGG........................ len:19 al:1
....................................................aAAGCACAACAUUAAUAGG........................ len:19 al:1
....................................................UAAGCACAACAUUAAUAGGAGc..................... len:22 al:136
....................................................UAgGCACAACAUUAAUAGGAGUAG................... len:24 al:2
....................................................UAAGCACAACAUUAAUAGa........................ len:19 al:45
....................................................UAAGCACAACAUUAAUAGGA....................... len:20 al:179
....................................................UAAGCACAACAUUAAUAGGAGUAGU.................. len:25 al:17
....................................................UAAGCACAACAUUAAUAGGAGUAGc.................. len:25 al:1
....................................................UAAGCACAACAUUAuUAGGAGU..................... len:22 al:1
....................................................UAAGCACAACAUUAAUAGGAG...................... len:21 al:505
....................................................UAAGCACAACAUUAgUAGG........................ len:19 al:1
....................................................UAAGCACAACAUUAAUAcG........................ len:19 al:1
....................................................UAAGCACAACAcUAAUAGGAGU..................... len:22 al:4
....................................................UAAGCACAACAUUAAUAGGAGU..................... len:22 al:1269
....................................................UAAGCACAACAUUAAUAGGAGUA.................... len:23 al:58
....................................................cAAGCACAACAUUAAUAGGAGUAG................... len:24 al:1
....................................................UgAGCACAACAUUAAUAGGA....................... len:20 al:1
....................................................UAAGCgCAACAUUAAUAGGAG...................... len:21 al:1
....................................................aAAGCACAACAUUAAUAGGAGUAG................... len:24 al:1
....................................................UAAGCACAACAUUAAUcGG........................ len:19 al:1
....................................................UAAGCACAACAUUAAUuGG........................ len:19 al:2
....................................................UAAGCACAACAUUgAUAGGAGU..................... len:22 al:3
....................................................UcAGCACAACAUUAAUAGGAGU..................... len:22 al:1
....................................................UAAGCACAACAUUAAUAGGuG...................... len:21 al:1
....................................................UAAGCACAACAUUAAUAGaAGUA.................... len:23 al:1
....................................................UAAGCACAACgUUAAUAGGA....................... len:20 al:1
....................................................UAAGCACAACAUUAgUAGGAGUAG................... len:24 al:1
....................................................UAAGCACAACAUcAAUAGGAGU..................... len:22 al:3
....................................................UAAGCACAACAUUAAUAGGAGgA.................... len:23 al:8
....................................................UAAGCACAACAUUAAUAGGAaU..................... len:22 al:12
....................................................UAAGCACAACAUUAAUAGGAu...................... len:21 al:181
....................................................UAAGCACAACAUUAAU........................... len:16 al:3
....................................................aAAGCACAACAUUAAUAGGAG...................... len:21 al:1
....................................................cAAGCACAACAUUAAUAGGAGUA.................... len:23 al:1
....................................................UAAGCACAgCAUUAAUAGGAGU..................... len:22 al:49
....................................................UAAGCACAACAUUAAUAGGAGgAG................... len:24 al:15
....................................................UAAGCACAACAUcAAUAGGAG...................... len:21 al:2
....................................................UAAGCACAACAUUAAcAGGAGU..................... len:22 al:5
....................................................UAAGCACAACAUUAAUAa......................... len:18 al:1
....................................................UAAGCACuACAUUAAUAGGAGU..................... len:22 al:2
....................................................UAAGCACAACAUUAAUuGGAGU..................... len:22 al:2
....................................................UAAGCACAACAUUAAUAGaA....................... len:20 al:1
....................................................UAAGCgCAACAUUAAUAGGAGU..................... len:22 al:2
....................................................UAAGCACAACAUUAAUAGGAGcAG................... len:24 al:1
....................................................UgAGCACAACAUUAAUAGGAG...................... len:21 al:1
....................................................UAAGCACAACAUUAAUAGGAGUu.................... len:23 al:5
....................................................UAAGCACAACAUUAAUAGGgGU..................... len:22 al:9
.....................................................AAGCACAACAUUAAUAGGAGUAGU.................. len:24 al:181
.....................................................AAGCACAACAUUAAUAGGgGUAG................... len:23 al:9
.....................................................AAGCACAACAUUAAUAGa........................ len:18 al:36
.....................................................AAGCACAACAUUAAUgGGAGU..................... len:21 al:23
.....................................................gAGCACAACAUUAAUAGG........................ len:18 al:1
.....................................................uAGCACAACAUUAAUAGGAGU..................... len:21 al:6
.....................................................AAGCACcACAUUAAUAGGAGU..................... len:21 al:2
.....................................................AAGCAuAACAUUAAUAGG........................ len:18 al:1
.....................................................AAGCACAACAUUAAUAGGAGcAG................... len:23 al:3
.....................................................AAGCACAACAUUAAcAGG........................ len:18 al:1
.....................................................AAGCACAACAUUAAUAGaAGU..................... len:21 al:4
.....................................................AAGCACAACAUUAgUAGGAGUAG................... len:23 al:7
.....................................................AAGCAaAACAUUAAUAGGAGUAG................... len:23 al:1
.....................................................AAGCACAACAUUAAUAGGAa...................... len:20 al:3
.....................................................AAGCACAACAUUAAUAGGAGUAu................... len:23 al:17
.....................................................AAGCACAACAUUAAUAGGAcU..................... len:21 al:5
.....................................................AAGCACAACgUUAAUAGG........................ len:18 al:2
.....................................................AAGCACAACAUUAAUAGGAGUgG................... len:23 al:16
.....................................................AAGCgCAACAUUAAUAGGAGUAG................... len:23 al:5
.....................................................AAGCACgACAUUAAUAGG........................ len:18 al:1
.....................................................AAGCACgACAUUAAUAGGAGUAG................... len:23 al:15
.....................................................AAGCACAACAUUAAcAGGAGUAG................... len:23 al:2
.....................................................AAGCACAACAUUAAUAGGAGUAGgU................. len:25 al:1
.....................................................AAGCACAACAUUAAaAGGAGUAG................... len:23 al:1
.....................................................AAGaACAACAUUAAUAGGAGUAGU.................. len:24 al:1
.....................................................AAGgACAACAUUAAUAGGAGU..................... len:21 al:1
.....................................................AgGCACAACAUUAAUAGGAGUA.................... len:22 al:1
.....................................................AAGCACAACAUUAAUAGaAGUAG................... len:23 al:2
.....................................................AAGCACAAaAUUAAUAGGAGU..................... len:21 al:2
.....................................................AAGCACAgCAUUAAUAGGAG...................... len:20 al:2
.....................................................AAGCACAACAUUgAUAGGAGUAG................... len:23 al:3
.....................................................AAGCACAACAUUAAUAGuAGU..................... len:21 al:1
.....................................................AAGCACAACAUUAAUAGGAuU..................... len:21 al:1
.....................................................AAGCACAACAUUAAUAGGAGgAG................... len:23 al:4
.....................................................AAGCACAACAUUAAUAGGAaUAG................... len:23 al:1
.....................................................AAGCcCAACAUUAAUAGGAGU..................... len:21 al:1
.....................................................AAGCACgACAUUAAUAGGAGU..................... len:21 al:50
.....................................................AAGCACAACgUUAAUAGGAGUAGU.................. len:24 al:2
.....................................................AAGCACAACAcUAAUAGGAGU..................... len:21 al:16
.....................................................AAGCACAACAUUAAUAGaA....................... len:19 al:2
.....................................................AAGCACAACAUUAAUuGGAGU..................... len:21 al:1
.....................................................AAGCACAgCAUUAAUAGG........................ len:18 al:3
.....................................................AAGCACAACAUUAAUAGGuGU..................... len:21 al:7
.....................................................AAGCACAACAUgAAUAGGAGU..................... len:21 al:3
.....................................................AAGCACAACAUUAAcAGGAGU..................... len:21 al:9
.....................................................uAGCACAACAUUAAUAGGAGUAG................... len:23 al:1
.....................................................gAGCACAACAUUAAUAGGAGU..................... len:21 al:60
.....................................................gAGCACAACAUUAAUAGGAGUAG................... len:23 al:21
.....................................................AAGCACAACAUUgAUAGGAGU..................... len:21 al:11
.....................................................AAGCACAACAUUAAUAGGgG...................... len:20 al:1
.....................................................AAGuACAACAUUAAUAGGAGU..................... len:21 al:18
.....................................................AAGCACAACAUUAAUAGGAGUAa................... len:23 al:93
.....................................................AAGCACAACAUUAAUgGGAGUAG................... len:23 al:8
.....................................................AAGCACAgCAUUAAUAGGAGUA.................... len:22 al:5
.....................................................AAGCACAACAUUAgUAGGAGUA.................... len:22 al:1
.....................................................AAGCACAACAUUAAUAGGgGU..................... len:21 al:38
.....................................................AgGCACAACAUUAAUAGGAGUAG................... len:23 al:14
.....................................................AAGCACAACAUUAAUAuGAGU..................... len:21 al:1
.....................................................AAGCACAACAUUAAaAGGAGU..................... len:21 al:2
.....................................................AAGCACAACAUUAAUAGGA....................... len:19 al:68
.....................................................AAGCACAACgUUAAUAGGAGUAG................... len:23 al:6
.....................................................AAGCAaAACAUUAAUAGGAGU..................... len:21 al:8
.....................................................AAGCgCAACAUUAAUAGGAGU..................... len:21 al:37
.....................................................AAGCACAACAUUAAUAGGAGUcG................... len:23 al:1
.....................................................AAGCACAACAUUAAUAGGAGUA.................... len:22 al:59
.....................................................AAGCACAACAUUAAUAGGAGUAG................... len:23 al:2418
.....................................................AAGCACAgCAUUAAUAGGAGUAGU.................. len:24 al:4
.....................................................AAGCACAAuAUUAAUAGGAGU..................... len:21 al:5
.....................................................AAGCACgACAUUAAUAGGAGUAGU.................. len:24 al:2
.....................................................AAGCACAACAUUAAUAGGAGU..................... len:21 al:8549
.....................................................AAGCACAACAUUAAUAaGAGUAG................... len:23 al:3
.....................................................AcGCACAACAUUAAUAGGAGU..................... len:21 al:3
.....................................................AAGCACAACAUUAgUAGGAGU..................... len:21 al:35
.....................................................AgGCACAACAUUAAUAGG........................ len:18 al:2
.....................................................AAGCAuAACAUUAAUAGGAGUAG................... len:23 al:2
.....................................................AAGCACAACAUUAAUAGGAGUAc................... len:23 al:5
.....................................................AAGCACuACAUUAAUAGGAGU..................... len:21 al:7
.....................................................AAaCACAACAUUAAUAGGAGU..................... len:21 al:6
.....................................................AAGuACAACAUUAAUAGG........................ len:18 al:1
.....................................................AAGCACAACAUUAAUAGGAGgA.................... len:22 al:1
.....................................................AAGCACAACAUUAAUAGGAGUg.................... len:22 al:2
.....................................................AAGCACAACAUUAAUAGGAGg..................... len:21 al:69
.....................................................AAGuACAACAUUAAUAGGAGUAG................... len:23 al:3
.....................................................AAGCACAACAUUAAUAaGAGU..................... len:21 al:5
.....................................................AAGCACAACAUcAAUAGGAGU..................... len:21 al:6
.....................................................AAGCAuAACAUUAAUAGGAGU..................... len:21 al:14
.....................................................AAGCACAACAUUAAUAGGAGUAGa.................. len:24 al:8
.....................................................AAGCACAACAUUAAUAGu........................ len:18 al:8
.....................................................AAGCACAACAUUAgUAGGAGUAGU.................. len:24 al:1
.....................................................AAGCACAACAUUuAUAGGAGUAG................... len:23 al:1
.....................................................AAGCgCAACAUUAAUAGGA....................... len:19 al:3
.....................................................AAGCACAACAUUAAUAGGu....................... len:19 al:1
.....................................................cAGCACAACAUUAAUAGGAGUAGU.................. len:24 al:1
.....................................................AAGaACAACAUUAAUAGGAGUAG................... len:23 al:1
.....................................................AAGCACAcCAUUAAUAGGAGUAGU.................. len:24 al:1
.....................................................AAGCACAACAUUAAUAGGcGU..................... len:21 al:3
.....................................................AAGCACAgCAUUAAUAGGAGUAG................... len:23 al:57
.....................................................AAGCACAACAUUAAU........................... len:15 al:2
.....................................................AAGCACAACAUUAAUAGGAcUAG................... len:23 al:1
.....................................................AAGCACAACAUUAAUAGG........................ len:18 al:170
.....................................................AAGCACAACAUUAAUAGGAGgAGU.................. len:24 al:3
.....................................................AAGCACAACAcUAAUAGGAGUAG................... len:23 al:4
.....................................................AAGCACAACAUUgAUAGGAG...................... len:20 al:1
.....................................................AAGCACAACAUUAAUAGGAGc..................... len:21 al:909
.....................................................AAGCACAACAUUAAUAGGgGUAGU.................. len:24 al:1
.....................................................AAGaACAACAUUAAUAGGAGU..................... len:21 al:3
.....................................................AAGCACAACAUcAAUAGGAGUAG................... len:23 al:7
.....................................................AAGCACAgCAUUAAUAGGAGU..................... len:21 al:191
.....................................................AAGCACAACAUUAgUAGGA....................... len:19 al:1
.....................................................AAGCuCAACAUUAAUAGGAGU..................... len:21 al:2
.....................................................AAGCACAACAUUAAUAGGAGUAGUc................. len:25 al:1
.....................................................AAGCACAACAUUAAUAGc........................ len:18 al:3
.....................................................AAcCACAACAUUAAUAGGAGU..................... len:21 al:2
.....................................................AuGCACAACAUUAAUAGGAGU..................... len:21 al:9
.....................................................cAGCACAACAUUAAUAGGAGU..................... len:21 al:1
.....................................................AAGCACAACAUUAAUAGGAaU..................... len:21 al:4
.....................................................AAGCgCAACAUUAAUAGGAGUAGU.................. len:24 al:3
.....................................................AAGCACAACAUUAAUAGGAGUAGaU................. len:25 al:4
.....................................................AAGCACAACAUUAAUAGGAGUu.................... len:22 al:4
.....................................................AAaCACAACAUUAAUAGGAGUAG................... len:23 al:6
.....................................................AAGCACAACAUUAAUgGGAGUAGU.................. len:24 al:1
.....................................................AAGCACAACAUUAAUAGGAG...................... len:20 al:82
.....................................................AAGCACAACAUUgAUAGG........................ len:18 al:2
.....................................................AcGCACAACAUUAAUAGGAGUAG................... len:23 al:2
.....................................................AAGCACAACAUUAAUAGGAGUAGc.................. len:24 al:24
.....................................................AAGCACAACAUUAAUAGGuGUAG................... len:23 al:1
.....................................................AgGCACAACAUUAAUAGGAGU..................... len:21 al:43
.....................................................AAGCACAACgUUAAUAGGAGU..................... len:21 al:16
......................................................AGCACAACAUUAAUAGGAGc..................... len:20 al:30
......................................................AGCACAACAUUAAUAGGAGUAa................... len:22 al:7
......................................................AGCACAACAUUAAUAGGAGgAG................... len:22 al:1
......................................................AaCACAACAUUAAUAGGAGUAG................... len:22 al:4
......................................................AGCACAgCAUUAAUAGGAGU..................... len:20 al:18
......................................................AGCACAACgUUAAUAGGAGU..................... len:20 al:1
......................................................AGCACAACAcUAAUAGGAGU..................... len:20 al:2
......................................................AGCACAACAUUAAUAGGgGUAG................... len:22 al:1
......................................................AGCACAACAUUAAUgGGAGUAG................... len:22 al:3
......................................................AGCACAACAUUAAUAGGAGUAu................... len:22 al:2
......................................................AGCACAACAUUAAUAGGgGU..................... len:20 al:1
......................................................AGCACAACAUUAAUAGGAGUAG................... len:22 al:267
......................................................AGCACAgCAUUAAUAGGAGUA.................... len:21 al:1
......................................................AGCACAACAUUAAUAGGAGU..................... len:20 al:364
......................................................AGCACAACAUUAAUAGGAGgAGU.................. len:23 al:1
......................................................AGCACAACAUUAAUAGGAGUAGU.................. len:23 al:35
......................................................AuCACAACAUUAAUAGGAGU..................... len:20 al:3
......................................................AGCACAACAUUAAUAGGA....................... len:18 al:6
......................................................AGCACAACAUUAAUAGGAGUAc................... len:22 al:2
......................................................AGCACgACAUUAAUAGGAGUAG................... len:22 al:1
......................................................AGCgCAACAUUAAUAGGAGUAG................... len:22 al:1
......................................................AGCACAACAUUAgUAGGAGUAGU.................. len:23 al:3
......................................................AGCACAACAUUAAUAGGAG...................... len:19 al:6
......................................................AGCACAACAUUgAUAGGAGUAG................... len:22 al:1
......................................................gGCACAACAUUAAUAGGAGU..................... len:20 al:1
......................................................AGCACgACAUUAAUAGGAGU..................... len:20 al:4
......................................................AGCACAACAUUAAUAGGAGUA.................... len:21 al:6
......................................................AGCACAACAUcAAUAGGAGU..................... len:20 al:3
......................................................AGCACAACAUUAgUAGGAGU..................... len:20 al:1
......................................................AGCACAACAUUAAUAGGAGUAGa.................. len:23 al:9
......................................................cGCACAACAUUAAUAGGAGUAG................... len:22 al:1
......................................................AGCgCAACAUUAAUAGGAGU..................... len:20 al:2
......................................................AGCACAACAUUAAUAGGAGUcG................... len:22 al:1
......................................................AaCACAACAUUAAUAGGAGU..................... len:20 al:8
......................................................AGCACuACAUUAAUAGGAGU..................... len:20 al:1
......................................................AGCACAACAUUAAUAGG........................ len:17 al:1
......................................................AGCACAACAUUAAUAGGAGg..................... len:20 al:3
......................................................AGCACAACAUUAAUgGGAGU..................... len:20 al:1
......................................................AGCACAACAUUAAUAGGAGUAGc.................. len:23 al:2
......................................................AGCACAACAcUAAUAGGAGUAG................... len:22 al:1
......................................................gGCACAACAUUAAUAGGAGUAG................... len:22 al:1
......................................................AGCACAACAUUAAUAGGAGUgG................... len:22 al:3
......................................................AGCACAgCAUUAAUAGGAGUAG................... len:22 al:31
......................................................AGCACAACAUUAAUAGGAGUAGUa................. len:24 al:5
......................................................AGCACAACAUUAAUAGGuGUA.................... len:21 al:1
......................................................AGaACAACAUUAAUAGGAGUAG................... len:22 al:1
.......................................................GCACAgCAUUAAUAGGAGUAG................... len:21 al:1
.......................................................GCACAACAUUAAUAGGAGUAG................... len:21 al:13
.......................................................GCACAACAUUAAUAGGAGc..................... len:19 al:2
.......................................................GCACAACAUUAAUAGGAGU..................... len:19 al:33
.......................................................GCACAgCAUUAAUAGGAGU..................... len:19 al:1
.......................................................GCACAACAUUAAUAGGAu...................... len:18 al:2
.......................................................GCACAACgUUAAUAGGAGU..................... len:19 al:1
.......................................................GCACAACAUUAAUAGGAGUA.................... len:20 al:1
..........................................................CAACAUUAAUAGGAGUAGU.................. len:19 al:3
..........................................................CAACAUUAAUAGGAGUAG................... len:18 al:1
..........................................................CAACAUUAAUAGGAGU..................... len:16 al:1
...........................................................AACAUUAAUAGGAGUAGaU................. len:19 al:1