Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_148:94531-94624 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_2882.ps.pdf
Locus Name: Cluster_2882
UCCUUGGCUGAGCUGGUUAUCAGACACUCAGGGACAAUUAAAUGAUUUUCUUUAAUUGUCCUUUAGUGUUUGUAGAGCCUUCUUCAGAACAAUA
...(((.(((((..((((..((((((((.(((((((((((((........))))))))))))).))))))))...))))..).))))..))).. (-34.90)
....................CAGACACUCAGGGACAAUUAAAUa.................................................. len:24 al:1
....................CAGACACUCAGGGACgAUUAA..................................................... len:21 al:2
....................CAGACACUCAGGGACAAc........................................................ len:18 al:4
....................CAGACACUCAGGGACAAU........................................................ len:18 al:9
....................CAGACACUCAGGGAC........................................................... len:15 al:1
....................CAGACACUCAGGGACAAUUAAAU................................................... len:23 al:112
....................CAGACACUCAGGGACAAUUAAA.................................................... len:22 al:130
....................CAGACACUCAGGGACAAUUAAAa................................................... len:23 al:3
....................CAGACACUCAGGGACAAUUAAu.................................................... len:22 al:1
....................CAGACACUCAGGGACAAUUAAAUGAUUUU............................................. len:29 al:4
....................CAGACACUCAGGGACAAUUAAAUG.................................................. len:24 al:5
....................CAGACACUCAGGGAuAAUU....................................................... len:19 al:10
....................CAGACACUCgGGGACAAU........................................................ len:18 al:1
....................CAGACACUCAGGGACAAcU....................................................... len:19 al:1
....................CAGACACUCAGGGACAAUU....................................................... len:19 al:73
....................CAGACACUCAGGGACAAUUAA..................................................... len:21 al:13
....................CAGACACUCgGGGACAAUUAAA.................................................... len:22 al:1
....................CAGACACUCAGGGACAAUc....................................................... len:19 al:6
....................CAGACACUCAGGGgCAAUUAAAU................................................... len:23 al:3
....................CAGACACUCAGGGACAAUUAAAc................................................... len:23 al:3
....................CAGACACUCgGGGACAAUUAAAU................................................... len:23 al:1
....................CAGACACUCAGGGACAAUUA...................................................... len:20 al:10
....................CAGACACcCAGGGACAAUUAAA.................................................... len:22 al:1
....................CgGACACUCAGGGACAAUUAAAU................................................... len:23 al:1
.....................AGACACUCAGGGACAAUUAA..................................................... len:20 al:2
......................GACACUCAGGGACAAUUAA..................................................... len:19 al:4
........................CACUCAGGGACAAUUAAAU................................................... len:19 al:1
...................................................cUAAUUGUCCUUUAGUGUUUGU..................... len:22 al:5
....................................................aAAUUGUCCUUUAGUGUUUGUAG................... len:23 al:2
....................................................UAAUUGUCCUUcAGUGUUUGUAG................... len:23 al:3
....................................................cAAUUGUCCUUUAGUGUU........................ len:18 al:1
....................................................UAAUUGUCCUUUAGUGUUgGU..................... len:21 al:3
....................................................UAAUUGUCCUUUAcUGUUUGU..................... len:21 al:1
....................................................UAAUUGUCCUUUAGUGUUUGUg.................... len:22 al:2
....................................................UAAUUGUCCUUUAGUGaUUGU..................... len:21 al:1
....................................................UAAUUGUCCUUcAGUGUUUGU..................... len:21 al:18
....................................................UAAUUGUCCUcUAGUGUUUGU..................... len:21 al:12
....................................................UAAUcGUCCUUUAGUGUUUGUAG................... len:23 al:1
....................................................UAAUUGUCCUUUAGUGUUUGUAu................... len:23 al:80
....................................................UAAUUGUCCUaUAGUGUUUGU..................... len:21 al:1
....................................................UAAUUGUCCUUaAGUGUUUGU..................... len:21 al:2
....................................................UAAUUGUCCcUUAGUGUUUGU..................... len:21 al:27
....................................................UAAUUGUCCUUgAGUGUUUGU..................... len:21 al:2
....................................................UAAUUGUCCUUUAGUGcUUGUAG................... len:23 al:1
....................................................UAAUUGUCCUUUAGUGcUUGU..................... len:21 al:25
....................................................UAAUUGUCCUUUAGcGUUUGU..................... len:21 al:18
....................................................UAAUUGUCCUUUAGUGUUUGUAGc.................. len:24 al:14
....................................................UAcUUGUCCUUUAGUGUUUGU..................... len:21 al:1
....................................................UAAUUGUCCUUUAGUGUUUGc..................... len:21 al:641
....................................................UAgUUGUCCUUUAGUGUUUGUA.................... len:22 al:3
....................................................UAAUUGcCCUUUAGUGUUUGUAG................... len:23 al:6
....................................................UAAUUGUCCUUUAGUGUUUGgA.................... len:22 al:1
....................................................UAAUUGUCCUUUAGUGUUUGUA.................... len:22 al:65
....................................................UAAUUGUCCUUUAGUGUcUGU..................... len:21 al:14
....................................................UAAUUGUCCcUUAGUGUUUG...................... len:20 al:1
....................................................UAAUUGUCCUUUAGUGUUUGUAGAu................. len:25 al:3
....................................................UAAUUGUCCUUUAGUGUgU....................... len:19 al:1
....................................................UAAUUGUCCUUUAGUGUcUGUAG................... len:23 al:2
....................................................UAAUUGUCCUUUAGUGUUUGUu.................... len:22 al:16
....................................................UAAUUGUCCUUUAGUaUUUGU..................... len:21 al:15
....................................................UAAUUGUCCUUUAGUGUUUGUAGAaC................ len:26 al:1
....................................................UAAgUGUCCUUUAGUGUUUGU..................... len:21 al:1
....................................................UAAUUGUCCcUUAGUGUUUGUAG................... len:23 al:5
....................................................UAAUUGUCCUUUAaUGUUUGU..................... len:21 al:4
....................................................UAAUUGUCCUUUAGUGUUUGUc.................... len:22 al:1
....................................................UAAUUGUCCUUUAGUGUUU....................... len:19 al:49
....................................................UAAUUGUCCUUUAGUGUUUGcA.................... len:22 al:1
....................................................UAAUUGUCuUUUAGUGUUUGU..................... len:21 al:3
....................................................UAAUUGUCCUUUAGUGUUUGUAGg.................. len:24 al:1
....................................................UAAUUGUCCUUUAGUGUaU....................... len:19 al:4
....................................................UAAUUGUCCUUUAGUGUUUGUAa................... len:23 al:46
....................................................UAAUUGUCCUUUAGUGUUUG...................... len:20 al:45
....................................................UAAUUGUCCUUUAGUGUUUGg..................... len:21 al:35
....................................................UAgUUGUCCUUUAGUGUUUGU..................... len:21 al:12
....................................................UgAUUGUCCUUUAGUGUUUGU..................... len:21 al:12
....................................................UAAUUGUCCUUUAGUGUUUa...................... len:20 al:1
....................................................UAAUUGUCCUUUAGUGUgUGU..................... len:21 al:1
....................................................UAAUUGUCCUUUAGUGUUUGUAc................... len:23 al:10
....................................................UAAcUGUCCUUUAGUGUUUGUA.................... len:22 al:1
....................................................UAAUUGUCCaUUAGUGUUUGU..................... len:21 al:1
....................................................UAAUUGUCCUUUAGUGUUUaU..................... len:21 al:2
....................................................UAAUUGUCCUgUAGUGUUUG...................... len:20 al:1
....................................................UAAUUGUCCUUUAGUGUUUGaA.................... len:22 al:1
....................................................UAAUaGUCCUUUAGUGUUUGU..................... len:21 al:3
....................................................UAAUUGUuCUUUAGUGUUUGUAG................... len:23 al:1
....................................................UAAUUGUCCUUUgGUGUUUGU..................... len:21 al:7
....................................................UAAUUGUCCUUUAGUGUUcGU..................... len:21 al:14
....................................................UAAUUaUCCUUUAGUGUUUGU..................... len:21 al:2
....................................................UAAUUGUCCUUUAGgGUUUGU..................... len:21 al:1
....................................................UAAUUGUCCUUUgGUGUUUGUAG................... len:23 al:3
....................................................UAAUUGUCCUUUAGUGU......................... len:17 al:1
....................................................UAAUUGUCCUUUAGUGUUUGU..................... len:21 al:5087
....................................................UAAUUGUCCUUUAGUGgUUGUAG................... len:23 al:1
....................................................UAAUUGUCCUUUAGUGUU........................ len:18 al:77
....................................................UAAUUGUCCUUUAGUGUc........................ len:18 al:1
....................................................UAAUUGUCgUUUAGUGUUUGU..................... len:21 al:1
....................................................UAAUcGUCCUUUAGUGUU........................ len:18 al:1
....................................................UAAcUGUCCUUUAGUGUUU....................... len:19 al:1
....................................................UAAUUGUCCUUUAGUGUUUGUAG................... len:23 al:672
....................................................UAAUUGcCCUUUAGUGUUUGU..................... len:21 al:20
....................................................UAAUUGUCCUUUAGUGgUUGU..................... len:21 al:1
....................................................UAAUUGUCCUUUAGUGUUUGa..................... len:21 al:47
....................................................gAAUUGUCCUUUAGUGUUUGU..................... len:21 al:1
....................................................UAAUUGUCCUUUAGUGUUUGUAGu.................. len:24 al:132
....................................................UAgUUGUCCUUUAGUGUUUGUAG................... len:23 al:3
....................................................UAAcUGUCCUUUAGUGUUUGU..................... len:21 al:8
....................................................UAAUUGUCCUUUAGUGUUUGUAuA.................. len:24 al:2
....................................................UAAUUGUCCUUUAGUGUUUu...................... len:20 al:3
....................................................UAAUUGUCCUUUAGUGUUUcU..................... len:21 al:1
....................................................UAAUUGUCCUUUAGUGUUUGaAG................... len:23 al:1
....................................................UAAUUGUCCUUUAGUGUUc....................... len:19 al:7
....................................................cAAUUGUCCUUUAGUGUUUGU..................... len:21 al:6
....................................................UAAUUGUCCUUUAGUGUUa....................... len:19 al:1
....................................................cAAUUGUCCUUUAGUGUUUGUAG................... len:23 al:1
....................................................aAAUUGUCCUUUAGUGUUUGU..................... len:21 al:4
....................................................UAAUUGUuCUUUAGUGUUUGU..................... len:21 al:5
....................................................UAAUUGUCCUUUAGUGUUcGUA.................... len:22 al:2
....................................................UAAUUGUCCUUUAGUGUUUGUAGA.................. len:24 al:3
....................................................UAAUUGUCCUUgAGUGUUUGUAG................... len:23 al:1
....................................................UAAUUGUCCcUUAGUGUUU....................... len:19 al:2
....................................................UAAUUGUCCUcUAGUGUUUG...................... len:20 al:1
....................................................UAAUUGUCCUUUAGUGUUUGUgG................... len:23 al:4
....................................................UAAUUGUCCUUUAGUGUUcG...................... len:20 al:1
....................................................UAAUUGUCCUUUAGUGUa........................ len:18 al:1
....................................................UAAUUGUCCUUUAGcGUUUGUAG................... len:23 al:2
....................................................UAAUcGUCCUUUAGUGUUUGU..................... len:21 al:27
....................................................UAAUcGUCCUUUAGUGUUUG...................... len:20 al:1
.....................................................AAUUGUCCUUUAGUGUUUGUAG................... len:22 al:5
.....................................................AAUUGUCCUUUAGUGUUUGU..................... len:20 al:48
.....................................................AAUUGUCCUUUAGUGUUUGc..................... len:20 al:6
.....................................................AAUcGUCCUUUAGUGUUUGUAG................... len:22 al:1
.....................................................AAUUGcCCUUUAGUGUUUGU..................... len:20 al:1
......................................................AUUGUCCUUUAGUGUUUGUAGu.................. len:22 al:3
......................................................AUUGUCCUUUAGUGUUUGUA.................... len:20 al:1
......................................................AUUGcCCUUUAGUGUUUGUAG................... len:21 al:1
......................................................AUUGUCCUUUAGUGUUUGUAG................... len:21 al:4
......................................................AUUGUCCUUUAGUGUUUGU..................... len:19 al:5
......................................................gUUGUCCUUUAGUGUUUGUA.................... len:20 al:1
.......................................................UUGUCCUUUAGUGUUUGUAGc.................. len:21 al:3
.......................................................UUGUCCUUUAGUGUUUGUAGA.................. len:21 al:1
.......................................................UUGUCCUUUAGUGUUUGUAc................... len:20 al:1
.......................................................UUGUCCUUUAGUGUUUGUAuA.................. len:21 al:1
.......................................................UUGUCCUUUAGUGaUUGUAG................... len:20 al:1
.......................................................UUGUCCUUUAGUGUUUGUAGAu................. len:22 al:1
.......................................................UUGUCCUUUAGUGUUUGUAa................... len:20 al:1
.......................................................UUGUCCUUcAGUGUUUGU..................... len:18 al:1
.......................................................UUGUCCUUUAGUGUUUGUAGu.................. len:21 al:13
.......................................................UUGUCCUUUAGUGUUUGc..................... len:18 al:3
.......................................................UUGUCCUUUAGUGUUUGgA.................... len:19 al:1
.......................................................UUGUCCUUUAGUGUUUGUAu................... len:20 al:13
.......................................................UUGUCCUUUAGUGUUUGU..................... len:18 al:28
.......................................................UUGUCCUUUAGUGgUUGUAG................... len:20 al:1
.......................................................UUGUCCUUUAGUGUUUGUAG................... len:20 al:43
.......................................................UUGcCCUUUAGUGUUUGUAG................... len:20 al:1
........................................................UGUCCUUUAGUGUUUGU..................... len:17 al:2