Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_138:127944-128038 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_2787.ps.pdf
Locus Name: Cluster_2787
UGGAAGGAGCAACUUAUCCUUUUCACUGAAGCCGUCUAUCUUGAUUUUAACCAAGGUCAAAUGGCUUUUGUGUUUAAAGGAUUUGUUGAAUGUGA
.........((((..(((((((.(((.((((((((..((((((........))))))...)))))))).)))...)))))))..))))....... (-30.90)
.....................aUCACUGAAGCCGUCUAUCUUGAU.................................................. len:24 al:6
......................UCACUGAAGCCGUCUAUCUUGAUUc................................................ len:25 al:3
......................UCACUGgAGCCGUCUAUCUUGAUU................................................. len:24 al:1
......................UCACUGAgGCCGUCUAUC....................................................... len:18 al:1
......................UCACUGAAGCCGUCUAUCUU..................................................... len:20 al:100
......................UCACUGAgGCCGUCUAUCUUGAU.................................................. len:23 al:7
......................UCACcGAAGCCGUCUAUCUUGAU.................................................. len:23 al:4
......................UCACUGAAGCCGUCUAUaU...................................................... len:19 al:7
......................UCACUGAAGCCGUCUAUCUUGAaUU................................................ len:25 al:7
......................UCACUGAAGCCGUCUAUCUUuAU.................................................. len:23 al:2
......................gCACUGAAGCCGUCUAUCUUGAU.................................................. len:23 al:1
......................UCACUGAAGCCGUCUAUuUUGAUU................................................. len:24 al:1
......................UCACUGAAGCCGUCUAgCU...................................................... len:19 al:2
......................UCACUGAAGCCGUCUAUu....................................................... len:18 al:22
......................UCACUGAAGCCGUCUAUCUUGg................................................... len:22 al:4
......................UCACUGAAGCuGUCUAUCUUGA................................................... len:22 al:4
......................UCACUGAAGuCGUCUAUC....................................................... len:18 al:1
......................UCACUGAAaCCGUCUAUCUUGAU.................................................. len:23 al:1
......................UCACUGAAGCCGUCcAUCUUGAU.................................................. len:23 al:1
......................UCACUGAAGCCGUCUAcCUUGAU.................................................. len:23 al:1
......................UuACUGAAGCCGUCUAUCUUG.................................................... len:21 al:1
......................UCACUGAAGCCGcCUAUCU...................................................... len:19 al:2
......................UuACUGAAGCCGUCUAUCUU..................................................... len:20 al:1
......................UCACUGAAuCCGUCUAUCUUGAU.................................................. len:23 al:1
......................UCACUGAAGCCGcCUAUC....................................................... len:18 al:2
......................UCACUGAAGCCGUCUAUCUUGAc.................................................. len:23 al:96
......................aCACUGAAGCCGUCUAUCU...................................................... len:19 al:3
......................UCACcGAAGCCGUCUAUCUUGA................................................... len:22 al:1
......................UCACUGAAGCCGUCUAUCUUGA................................................... len:22 al:192
......................UCACUGAgGCCGUCUAUCUUGA................................................... len:22 al:1
......................UCACUGAAGCCGUCUAUCUUGcU.................................................. len:23 al:1
......................UCACUGAAGCCGUCUgUCUUGAUUU................................................ len:25 al:1
......................UCACUGAAGCCGUCUAUCUUa.................................................... len:21 al:10
......................UCACUGAAGCCGUCUAUCUUaAU.................................................. len:23 al:1
......................UCAuUGAAGCCGUCUAUCUUGAUU................................................. len:24 al:1
......................UCACUGAAGCCGUCUAUCUUGAUa................................................. len:24 al:2
......................aCACUGAAGCCGUCUAUCUUGAU.................................................. len:23 al:3
......................UCuCUGAAGCCGUCUAUCUUGAU.................................................. len:23 al:1
......................UCACUGAAGuCGUCUAUCU...................................................... len:19 al:2
......................UCACUGAAGCCGUCUAUCUUGAUUUU............................................... len:26 al:5
......................UaACUGAAGCCGUCUAUCU...................................................... len:19 al:2
......................UCACUGAAGCCGUCUAUC....................................................... len:18 al:129
......................UCACUGAAGCCGUCUAUCUUGc................................................... len:22 al:71
......................UCACUGAAGCCaUCUAUCUU..................................................... len:20 al:1
......................UCACUGAAGCuGUCUAUCUUGAU.................................................. len:23 al:1
......................cCACUGAAGCCGUCUAUCUUGA................................................... len:22 al:2
......................UCACUGAAGCCGUCUAUCUgGA................................................... len:22 al:1
......................UCACUGAAGCCGUCUAUCUUGgU.................................................. len:23 al:13
......................UCACUGAAGCCGUCUAUCUc..................................................... len:20 al:10
......................UCACUGAAGCCGUCUAUCUUu.................................................... len:21 al:18
......................UCACUGAAGCCGUCUAUCUUGAaU................................................. len:24 al:83
......................UuACUGAAGCCGUCUAUCUUGAU.................................................. len:23 al:4
......................UCACUGAAGCCGUCUAUCa...................................................... len:19 al:19
......................UCACUGAAGCaGUCUAUCU...................................................... len:19 al:1
......................UCACUGAAGCCGcCUAUCUUGAU.................................................. len:23 al:4
......................UCACUGAAGCCGUCUAUCUUGuU.................................................. len:23 al:3
......................UCACUGAAGCCGUCUAUCUUGAUc................................................. len:24 al:4
......................UCACUGgAGCCGUCUAUCUUGAU.................................................. len:23 al:3
......................UCACcGAAGCCGUCUAUCU...................................................... len:19 al:1
......................UCACUGAAGCCGUCUAUCUUGAUUU................................................ len:25 al:21
......................UCACUGAAGCCGUCUAUCUcGAUU................................................. len:24 al:1
......................UCACUGAAGCCGUCUAUCUUGAUU................................................. len:24 al:98
......................UCACUGgAGCCGUCUAUC....................................................... len:18 al:2
......................UCACUGAAGCCGUCUAUCUUGAa.................................................. len:23 al:8
......................UCACUGAgGCCGUCUAUCUU..................................................... len:20 al:1
......................UCACUGAAGCCGUCcAUCUUGA................................................... len:22 al:1
......................UCACUGAAGCCGaCUAUCUUGAU.................................................. len:23 al:1
......................UCACUGAAGCCGUCUAUuUU..................................................... len:20 al:5
......................UCACUGgAGCCGUCUAUCU...................................................... len:19 al:1
......................UCACUGAAGCCGUCUAUCUUGAUUUUu.............................................. len:27 al:3
......................UCACUGAAGCCGUCUAUCc...................................................... len:19 al:63
......................UCgCUGAAGCCGUCUAUCUUGA................................................... len:22 al:1
......................UCACUGAgGCCGUCUAUCUUG.................................................... len:21 al:1
......................UCACUGAAGCCGUCUAUCUa..................................................... len:20 al:2
......................UCACUGAAGCCGUCUAUCUUG.................................................... len:21 al:77
......................UCgCUGAAGCCGUCUAUCU...................................................... len:19 al:2
......................cCACUGAAGCCGUCUAUCU...................................................... len:19 al:2
......................UCACUGAAGCCGUCUAUCUUGAUUUUc.............................................. len:27 al:1
......................UCACUGAAGCCGUCUAUCUUGAU.................................................. len:23 al:924
......................UCACUGAAGCCGUCUAUCUUGAg.................................................. len:23 al:3
......................UgACUGAAGCCGUCUAUC....................................................... len:18 al:1
......................UCACUGAAGCCGUCUAUCgUGAU.................................................. len:23 al:1
......................UCACUGgAGCCGUCUAUCUUGAUUU................................................ len:25 al:1
......................UCACUGAAGCCaUCUAUCU...................................................... len:19 al:1
......................UCACUGAgGCCGUCUAUCU...................................................... len:19 al:1
......................UCACUGAAGCCGUCUAUCUcGAU.................................................. len:23 al:1
......................UCACUGAAGCCGUCUAgCUUGAUU................................................. len:24 al:1
......................UuACUGAAGCCGUCUAUC....................................................... len:18 al:1
......................UCACUGAAGCCGUCUAUCUUGAUaU................................................ len:25 al:60
......................UCACUGAAGCCGUCUAUuU...................................................... len:19 al:1
......................UCACUGAAGCCGUCUAUa....................................................... len:18 al:7
......................cCACUGAAGCCGUCUAUCUUGAU.................................................. len:23 al:6
......................UCACUGAAGCCGUCUA......................................................... len:16 al:1
......................UCACUGAAGCCGUCgAUCUUGA................................................... len:22 al:1
......................UCACUGAAGCCaUCUAUCUUGAU.................................................. len:23 al:4
......................UCACUGAAGCCGUCUAUCUUc.................................................... len:21 al:1
......................cCACUGAAGCCGUCUAUCUU..................................................... len:20 al:1
......................UCACUGAAGCCGUCUAUCcUGAU.................................................. len:23 al:1
......................UCACUGAAGCCGUCUAUCU...................................................... len:19 al:424
......................UCACUGAAGCCGUCUAUCUUGu................................................... len:22 al:562
......................UuACUGAAGCCGUCUAUCUUGA................................................... len:22 al:2
......................UCACUGAAGCCGUCUAUCg...................................................... len:19 al:1
.......................aACUGAAGCCGUCUAUCUUGA................................................... len:21 al:2
.......................CACUGAAGCCGUCUAUCU...................................................... len:18 al:7
.......................CgCUGAAGCCGUCUAUCUUGAU.................................................. len:22 al:2
.......................CACUGAAGCCGUCUAUCUUGAUU................................................. len:23 al:2
.......................CACUGAAGCCGUCUAUCc...................................................... len:18 al:3
.......................CACUGAAGCCGUCUAUCUUGAU.................................................. len:22 al:12
.......................CACUGAAGCCGUCUAUCUUGAc.................................................. len:22 al:3
.......................CACUGAAGCCGUCUAUCUUGA................................................... len:21 al:2
........................ACUGAAGCCGUCUAUCUUGu................................................... len:20 al:3
........................ACUGAAGCCGUCUAUCUUGA................................................... len:20 al:4
..........................UGAAGCCGUCUAUCUUGu................................................... len:18 al:4
....................................................AAGGUCAgAUGGCUUUUGUGUUUA................... len:24 al:28
....................................................AAGGUCAAAUGGCUUUUGUGUUUA................... len:24 al:4
....................................................AAGGUCAgAUGGCUUUUGU........................ len:19 al:3
....................................................AAGGUCAgAUGGCUUUUGUGUU..................... len:22 al:27
....................................................AAGGUCAgAUGGCUUUUGUGUUU.................... len:23 al:15
....................................................AAGGUCAgAUGGCUUUUGUGUUUAA.................. len:25 al:5
.....................................................AGGUCAgAUGGCUUUUGUGUUUA................... len:23 al:1
........................................................UCAgAUGGCUUUUGUGUUUA................... len:20 al:4
.............................................................................AGGAUUUGUUGAAUGUGA len:18 al:3
.............................................................................AGGAUUUGUUGAAUGUaA len:18 al:1