Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_3893:3797-3890 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_15890.ps.pdf
Locus Name: Cluster_15890
UUCAAUAUUUUUAGGCGUUUUUAAGAAUAUCAGUGAUAGGGAUUUUUAAAUGCCUAUCACUGAUAUUCUUAAUAACGCCUAUAAAAACUAAAGU
.......(((.((((((((.((((((((((((((((((((.(((....))).)))))))))))))))))))).)))))))).)))......... (-45.80)
UUCAAUAUUUUUAGGCGUUg.......................................................................... len:20 al:1
UUCAAUAUUUUUAGGCGUUU.......................................................................... len:20 al:9
.UCAAUAUUUUUAGGCGUUc.......................................................................... len:19 al:1
.UCAAUAUUUUUAGGCGUUU.......................................................................... len:19 al:14
..CAAUAUUUUUAGGCGUUU.......................................................................... len:18 al:2
...................UUUAAGAAUAUCAGUGAUAGGu..................................................... len:22 al:1
...................UUUAAGAAUAUCAGUGAU......................................................... len:18 al:6
...................UUUAAGAAUAUCgGUGAUAGGGA.................................................... len:23 al:1
...................cUUAAGAAUAUCAGUGAUAGGGA.................................................... len:23 al:1
...................UUUAAGAAUAUCAGUGAUAG....................................................... len:20 al:1
...................UUUAAGAAUAUCAGUGAc......................................................... len:18 al:1
...................UUUAAGAAUAUCAGUGAUAGGG..................................................... len:22 al:6
...................UUUAAGAAUAUCAGUGAUAGGGA.................................................... len:23 al:9
....................UUAAGAAUAUCAGUGAUcGGG..................................................... len:21 al:1
....................UUAAGgAUAUCAGUGAUAGGG..................................................... len:21 al:1
....................UUAAGAAUAUCAGgGAUAGGGAU................................................... len:23 al:1
....................UUAAGAgUAUCAGUGAU......................................................... len:17 al:1
....................UUAAGAAUAUCAGUG........................................................... len:15 al:6
....................UUAAGAAUAUCAGUGAUA........................................................ len:18 al:43
....................UUAAGAAUAUCAGUGAU......................................................... len:17 al:23
....................UUAAGAAUAUCAGUGAc......................................................... len:17 al:4
....................UUAAGAAUAUCAGUGAUAGu...................................................... len:20 al:2
....................UUAAGAAUAUCAGUGAUAGG...................................................... len:20 al:20
....................UUAAGAAUAUCgGUGAUAGGGAUU.................................................. len:24 al:1
....................UUAAGAAUAUCAGUGgUAGGGA.................................................... len:22 al:4
....................UUAAGAAUAUCAGUGAUAGGGu.................................................... len:22 al:13
....................UUAAGAAUAUCAGUGAcAGGG..................................................... len:21 al:1
....................UUAAGAAUAUCAGUGAUAGGGAUU.................................................. len:24 al:60
....................UUAAGAAUAUCAGUGAUAGGG..................................................... len:21 al:277
....................UUgAGAAUAUCAGUGAUAGGGAU................................................... len:23 al:8
....................UUAAGAAUAUaAGUGAU......................................................... len:17 al:1
....................UUAAGAAUAUCAGUGAUAGGGAU................................................... len:23 al:225
....................UUAAGAAUAUCAGcGAUAGGGAU................................................... len:23 al:3
....................UUAAaAAUAUCAGUGAUAG....................................................... len:19 al:1
....................UUAAGgAUAUCAGUGAUAGGGAU................................................... len:23 al:1
....................UUAAGAAUAUCAGUGAcAGGGA.................................................... len:22 al:1
....................UUAAGAAUAUCAGUGAUgGGGAU................................................... len:23 al:4
....................UUAAGAAUAUCAGUGgUAGGG..................................................... len:21 al:1
....................UUAAGAAUAUCAGUGAUAa....................................................... len:19 al:1
....................UUAAGAAUAUCAGUGAUAGGGgU................................................... len:23 al:2
....................UUAAGAAUAUCAGUGAUAGGGAaU.................................................. len:24 al:10
....................UUAAGAAUAUCAGUGAcAGGGAU................................................... len:23 al:1
....................UUAAGAAUAUCAGUGAUAGa...................................................... len:20 al:2
....................UUAAGAAUAUCAGUGAUu........................................................ len:18 al:1
....................UUgAGAAUAUCAGUGAUAGGG..................................................... len:21 al:4
....................UUAAGAAUAUCAGUGA.......................................................... len:16 al:6
....................cUAAGAAUAUCAGUGAUAGGG..................................................... len:21 al:3
....................UUAAGgAUAUCAGUGAU......................................................... len:17 al:1
....................UUgAGAAUAUCAGUGAUA........................................................ len:18 al:1
....................UUgAGAAUAUCAGUGAUAGGGA.................................................... len:22 al:1
....................UUAgGAAUAUCAGUGAUA........................................................ len:18 al:1
....................UUAgGAAUAUCAGUGAUAGGGA.................................................... len:22 al:5
....................UUAAGAAUAUCgGUGAUAGGGAU................................................... len:23 al:2
....................UUAAGAAUAUCAGUGAUAGGGg.................................................... len:22 al:3
....................UUAAGAAUAUCgGUGAUAGGGA.................................................... len:22 al:2
....................UUAAGAAUAUCAaUGAUAGGG..................................................... len:21 al:1
....................UUAAGAAUAUCAGUGAUgGGGA.................................................... len:22 al:3
....................UUAAGAAUgUCAGUGAUAGGG..................................................... len:21 al:2
....................UUAAGAAUAUCAGUGAUAGGGA.................................................... len:22 al:429
....................UUAAGAAUAUCAGUGAUAGGGAc................................................... len:23 al:22
....................aUAAGAAUAUCAGUGAUAGGGA.................................................... len:22 al:1
....................UUAAGAAUAcCAGUGAUAGGGAU................................................... len:23 al:3
....................UUAAGAAUAUCAGUGAUAGGGAUc.................................................. len:24 al:3
....................UUAAGAAUAUCAGUGAUAG....................................................... len:19 al:19
....................UUAAGAAUAcCAGUGAUAGGGA.................................................... len:22 al:4
....................UUAAGAAUAUCAGUGAUgGGG..................................................... len:21 al:1
....................UUAAGAAUAUCAGUGAUAGGGAa................................................... len:23 al:1
....................UUAAGAAcAUCAGUGAUAGGGA.................................................... len:22 al:2
....................UUAAGAAUAUCAGUGAUAGGGc.................................................... len:22 al:2
....................UUAAGAAUAUCAGUGAUAGGa..................................................... len:21 al:11
....................UUAAGAAUAUCAGUGAUAGGGAg................................................... len:23 al:2
....................UUAAGAAUAUCAGUGAUAGGGAcU.................................................. len:24 al:1
....................UUAAGAAUAUCAGUGAUAGGu..................................................... len:21 al:3
....................UUAAGAAUAUCgGUGAUAGGG..................................................... len:21 al:8
....................UUAAGAAUAUCgGUGAU......................................................... len:17 al:1
....................UUAgGAAUAUCAGUGAUAGGGAU................................................... len:23 al:4
....................UUAAGAAUAUCAGcGAUAGGG..................................................... len:21 al:1
....................UUAAGAAUAUCAGUGAUAu....................................................... len:19 al:1
.....................UAAGAAUAUCgGUGAUAG....................................................... len:18 al:1
.....................UAAGAAUAUCAGUGAUAGGa..................................................... len:20 al:1
.....................UAAGAAUAUCAGUGAUAGGGAUa.................................................. len:23 al:1
.....................UAAGAAUAUCAGUGAUAGGG..................................................... len:20 al:22
.....................UAAGAAUAUCAGUGAcAGGGAUU.................................................. len:23 al:1
.....................UAAGAAUAUCAGUGAUAGGGA.................................................... len:21 al:30
.....................UAAGAAUAUCAGUGAUAGGGAc................................................... len:22 al:1
.....................UAAGgAUAUCAGUGAUAGGGAU................................................... len:22 al:2
.....................UAAGAAUAUCAGUGgUAGGGAUU.................................................. len:23 al:1
.....................UAAGAAUAUCAGUGAUAGG...................................................... len:19 al:1
.....................UAAGAAUAUCAGUGAUAGGu..................................................... len:20 al:1
.....................UAAGAAUAUCAGUGAUAGGGAUU.................................................. len:23 al:39
.....................UAAGAAUAUCAGUGAUgGGGAU................................................... len:22 al:4
.....................UAAGAAUAUCAGUGAUAGuGAU................................................... len:22 al:1
.....................UAAGAAUAUCAGUGAUAG....................................................... len:18 al:1
.....................UAAGAAUAUCAGUGAUAGGGAU................................................... len:22 al:33
.....................UAAGAAUAUCgGUGAUAGGGAUU.................................................. len:23 al:1
.....................UAAGAAUAUCAGUGAU......................................................... len:16 al:5
.....................UAAGAAUAcCAGUGAUAGGGAUU.................................................. len:23 al:2
.....................UAAGAAUgUCAGUGAUAGGG..................................................... len:20 al:1
.....................UAAGAAUAUCAGUGgUAGGGAU................................................... len:22 al:1
.....................UAAGAAUgUCAGUGAUAGGGAU................................................... len:22 al:1
.....................UAAGAAUAUCAGUGA.......................................................... len:15 al:1
.....................UAAGAAUgUCAGUGAUAGG...................................................... len:19 al:2
.....................aAAGAAUAUCAGUGAUAGGGA.................................................... len:21 al:1
.....................UgAGAAUAUCAGUGAUAGGGAU................................................... len:22 al:1
......................AAGAAUAUCAGUGAUAGGGAU................................................... len:21 al:2
.......................AGAAUAUCAGUGAUAGGGA.................................................... len:19 al:5
..................................................UGCCUAUCACUGAUAUUCUUAAc..................... len:23 al:1
..................................................UGCCUAUCACUGAUAUUCUUAAU..................... len:23 al:4
....................................................CCUAUCACUGAUAUUCUUAAUu.................... len:22 al:1
....................................................CCUAUCACUGAUAUUCUUA....................... len:19 al:1
....................................................CCUAUCACUGAUAUUCUUAAc..................... len:21 al:1
....................................................CCUAUCACUGAUAUUCUU........................ len:18 al:2
....................................................CCUAUCAaUGAUAUUCUUAAU..................... len:21 al:1
....................................................CCUAUCACUGAUAUUCUUAAUA.................... len:22 al:39
....................................................CCUAUCACUGAUAUUCUUAAU..................... len:21 al:25
......................................................UAUCACUGAUAUUCUUAAUAA................... len:21 al:1
......................................................UAUCACUGAUAUUCUUAAUAu................... len:21 al:1
......................................................UAUCACUGAUAUUCUUAAU..................... len:19 al:20
.......................................................AUCACUGAUAUUCUUAAU..................... len:18 al:1