Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_3072:29428-29521 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_14999.ps.pdf
Locus Name: Cluster_14999
CAUAAGCUGACUGUGUGUGCAACUUUCACUGGUUAAAAACUCCUUUACGUGAAUUUUUAGCCCGCGGAAGUUGCGUAAACAGAUCUUUUUCACA
........((((((.((((((((((((.(.(((((((((.((........)).))))))))).).)))))))))))).)))).))......... (-29.00)
CAUAAGCUGACUGUGUGUGC.......................................................................... len:20 al:1
....................AACUUUCACUGGaUAAAAACUC.................................................... len:22 al:1
....................AACUUUCACUGGUUAAAAACUC.................................................... len:22 al:6
.....................ACUUUCACUGGUUAAAAACUC.................................................... len:21 al:2
....................................................AUUUUUAGCCCGCGGAAGUUaC.................... len:22 al:2
....................................................AUUUUUAGCCCGCGGAAGUUGg.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGU....................... len:19 al:8
....................................................AUUUUUAGCCCGCGGAAGUU...................... len:20 al:4
....................................................AUUUUUAGCCCGuGGAAGUUGC.................... len:22 al:1
....................................................AUUcUUAGCCCGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUc...................... len:20 al:1
....................................................AUUUUUAGCCCGCGGAAGUUGu.................... len:22 al:146
....................................................AUUUUUAGCCCGCGGAAGc....................... len:19 al:2
....................................................AUUUUUAGCCCGCGGAgGUU...................... len:20 al:1
....................................................AUUUUUAGCCCGCGGAAGUUGC.................... len:22 al:325
....................................................AUUUUUAGCCCGCGGAAGaUGC.................... len:22 al:1
....................................................AUUUUUgGCCCGCGGAAGUUGC.................... len:22 al:2
....................................................AUUUaUAGCCCGCGGAAGUUGC.................... len:22 al:2
....................................................gUUUUUAGCCCGCGGAAGUUGC.................... len:22 al:2
....................................................AUUUUUAGCCCGCGGAAGUUG..................... len:21 al:7
....................................................AUUUUUAGCCCGCGGgAGUUGC.................... len:22 al:2
....................................................AUUUUUAGCCuGCGGAAGUUGC.................... len:22 al:4
....................................................AUUUUUAGCCCGCGuAAGUUG..................... len:21 al:1
....................................................AUUUUUAGuCCGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUUuC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUUGa.................... len:22 al:8
....................................................AUUUUUAGCCCGCGGAAGUUGCu................... len:23 al:32
....................................................AUUUgUAGCCCGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUcAGCCCGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUaGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUUGCc................... len:23 al:8
....................................................AUUUUUAGCCCGCGGAAGUUGCG................... len:23 al:4
....................................................AUUUUUAGCCCGCGGAgGUUGC.................... len:22 al:2
.....................................................UUUUUAGCCCGCGGAAGUUGu.................... len:21 al:6
.....................................................UUUUUAGCCCGCGGAAGUUGC.................... len:21 al:4
.....................................................aUUUUAGCCCGCGGAAGUUGC.................... len:21 al:2
.....................................................UUUUUAGCCCGCGGAAGUUGCu................... len:22 al:3
......................................................UUUUAGCCCGCGGAAGUUGCu................... len:21 al:7
......................................................UUUUAGCCCGCGGAAGUUGu.................... len:20 al:1
......................................................UUUUAGCCCGCGGAAGUUGC.................... len:20 al:4