Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_47:475972-476066 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_1140.ps.pdf
Locus Name: Cluster_1140
GUGGUUUCUUUUUCGUUGUUCCUUUCUUCUGAAAUAAUAAUUAUUUAGUAAUAAUUAUAUCAGAAGGAAGAAGACAAAGAAAGAGACAAGAAUCU
...((((((((((..(((((.(((((((((((.(((((.(((((...))))).))))).)))))))))))..)))))))))))))))........ (-30.60)
.UGGUUUCcUUUUCGUUGUU........................................................................... len:19 al:1
.UGGUUUCUUUUUCGUUGUU........................................................................... len:19 al:6
...................UCCUUUCUUCUGAAAUAAUAAU...................................................... len:22 al:1
...................UCCUUUCUUCUGAAAUAAUAAUUAUUUAGU.............................................. len:30 al:3
...................UCCUUUCUUCUGAAAUAAUAAUUAU................................................... len:25 al:4
...................UCCUUUCUUCUGAAAUAAUAAUU..................................................... len:23 al:2
...................UCCUUUCUUCUGgAAUAAUAAUUAUUU................................................. len:27 al:1
...................UCCUUUCUUCUGAAAUAAUA........................................................ len:20 al:1
...................UCCUUUCUUCUGAAAUAAcAAUUAU................................................... len:25 al:1
....................CCUUUCUUCUGAAAUAAUAAUU..................................................... len:22 al:4
....................CCUUUCcUCUGAAAUAAUAAUU..................................................... len:22 al:3
....................CCUUUCUUCUGAAAUAAUAAUUA.................................................... len:23 al:6
....................CCUUUCUUCUGAAAUAAUAAUUAUUUAGU.............................................. len:29 al:7
....................CCUUUCUUCUGgAAUAAUAAUU..................................................... len:22 al:1
..................................................AUAAUUAUAUCAGAAGGAgGAAGA..................... len:24 al:3
..................................................AUAAUUAUAUCAGAAGGAAGAAGu..................... len:24 al:32
..................................................AUAAUUAUAUCAGAAGGAAGAAc...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAcG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAGACc................... len:26 al:2
..................................................AUAAUUAUAUCAGAAGGAAGA........................ len:21 al:175
..................................................AUAAUUAUAcCAGAAGGAAGA........................ len:21 al:1
..................................................AUAAUUAUAUCAGgAGGAAGAAGA..................... len:24 al:2
..................................................AaAAUUAUAUCAGAAGGAAGAAGA..................... len:24 al:1
..................................................gUAAUUAUAUCAGAAGGAAGAAG...................... len:23 al:4
..................................................AUgAUUAUAUCAGAAGGAAGAAGA..................... len:24 al:3
..................................................AUAAUUAUAUCAGAAGGAAGAAGg..................... len:24 al:7
..................................................AUAAUUAUAUCAGgAGGAAGA........................ len:21 al:1
..................................................AUAAUUAUAUuAGAAGGAAGAAG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGgAGA........................ len:21 al:2
..................................................AUAAUUAUAUCAGAAGGAAGAAGAaA................... len:26 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAG...................... len:23 al:123
..................................................AUAAUUAUAUCAGAAGGAAG......................... len:20 al:2
..................................................AUAAUUAUAUCAGAAGGAAGAAGACA................... len:26 al:6
..................................................AUAAUUAUgUCAGAAGGAAGA........................ len:21 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAA....................... len:22 al:3
..................................................AUAAUUAUAUCAGAAGGAAGAgGA..................... len:24 al:6
..................................................AUAgUUAUAUCAGAAGGAAGAAGA..................... len:24 al:3
..................................................AUAAUUAUAUCAGAAGGAAGAAa...................... len:23 al:2
..................................................AUAAcUAUAUCAGAAGGAAGAAG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGuAGAAGA..................... len:24 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAGACu................... len:26 al:11
..................................................AUAAUUAUAUCAGAAGGgAGAAGA..................... len:24 al:4
..................................................AUAAUUAUgUCAGAAGGAAGAAGA..................... len:24 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAGc..................... len:24 al:4
..................................................AUAAUUAUAUCAGAAGGAAGgAG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGAAGAAGAa.................... len:25 al:34
..................................................AUAAUUAUAUCAGAAGGAAGAAGA..................... len:24 al:620
..................................................AUAAUUAUAUCAGAAGGAuGAAG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAAGGgAGAAG...................... len:23 al:1
..................................................AUAAUUAUAUCAGAgGGAAGAAGA..................... len:24 al:2
..................................................AUAAUUAUAUCAGAAGGAAGAAGAu.................... len:25 al:2
..................................................AUAAUUAUAUCAGAAGGA........................... len:18 al:5
..................................................AUAAUUAUAUCAGAAGGAAGAAu...................... len:23 al:14
..................................................AUAAUUAUAUCAGAAGGAAGAgG...................... len:23 al:2
..................................................AUAAUUAUAUCAGAAGGAAGg........................ len:21 al:1
..................................................AUgAUUAUAUCAGAAGGAAGAAG...................... len:23 al:1
...................................................UgAUUAUAUCAGAAGGAAGAAGAC.................... len:24 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAc...................... len:22 al:1
...................................................UAAUUAUAUCAGgAGGAAG......................... len:19 al:1
...................................................UAAUUAUAcCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAAGGAAGAAGg..................... len:23 al:8
...................................................UAAUUAUAUCAGAAGGAAGAAa...................... len:22 al:6
...................................................UAAUUAaAUCAGAAGGAAGAAG...................... len:22 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAGAu.................... len:24 al:9
...................................................UAAUUAUgUCAGAAGGAAGAAGA..................... len:23 al:1
...................................................UAAUUAUAUCAGAgGGAAGAAGA..................... len:23 al:3
...................................................UAAUUAUAUCAGAAGGA........................... len:17 al:1
...................................................UAAUUAUAUCAGAAGGAAGAA....................... len:21 al:14
...................................................UAAUaAUAUCAGAAGGAAGAAGA..................... len:23 al:1
...................................................UgAUUAUAUCAGAAGGAAGA........................ len:20 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAGAaA................... len:25 al:2
...................................................UAAUUAUAUCAGAAGGAAGAgGA..................... len:23 al:4
...................................................UAAUUAUAUCAGAAGGAAGAAGACA................... len:25 al:9
...................................................UAAUUAUAUCAGAAGGAgGAAG...................... len:22 al:2
...................................................UAAUUAUAUCAGAAGGAAGg........................ len:20 al:3
...................................................UAAUcAUAUCAGAAGGAAGA........................ len:20 al:1
...................................................UAAUUAUAUCAGAAGGAAGu........................ len:20 al:5
...................................................UAgUUAUAUCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAgGGAAGA........................ len:20 al:4
...................................................UAAUUAUAUCAGAAGGAAGAAGAa.................... len:24 al:22
...................................................UAAUUAUAUCAGAAGGgAGA........................ len:20 al:1
...................................................UAAUUAUAUCAGgAGGAAGAAG...................... len:22 al:2
...................................................UAAUUAUAUCAGAAGGAAGAAGACc................... len:25 al:4
...................................................UAAUcAUAUCAGAAGGAAGAAGA..................... len:23 al:3
...................................................UAAUUAUAUCAGAAaGAAGAAGA..................... len:23 al:2
...................................................UAAUUAcAUCAGAAGGAAGAAGA..................... len:23 al:5
...................................................UAAUUAUAUCAGAAGGAAGAAGA..................... len:23 al:1119
...................................................UAAUUAUAUCAGAgGGAAGAAG...................... len:22 al:1
...................................................UgAUUAUAUCAGAAGGAAGAAGA..................... len:23 al:4
...................................................UAAUUAUAUCAGAAGGAAGAAGc..................... len:23 al:3
...................................................UAAUUAUAUCAGAAGGAA.......................... len:18 al:3
...................................................UAAUUAUAUCAGAAGGAAGAuGA..................... len:23 al:3
...................................................UAAUUAUAUCAGAAGGAAGAAGgC.................... len:24 al:1
...................................................UAAUUAUAUCAGAAGGAAGA........................ len:20 al:259
...................................................UAAcUAUAUCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAAGGAgGAAGA..................... len:23 al:8
...................................................UAAUUgUAUCAGAAGGAAGA........................ len:20 al:1
...................................................aAAUUAUAUCAGAAGGAAGAAGA..................... len:23 al:1
...................................................UAAUUAUgUCAGAAGGAAGA........................ len:20 al:1
...................................................UAAUUAUAUuAGAAGGAAGAAG...................... len:22 al:1
...................................................UAAUUAUAUuAGAAGGAAGAAGA..................... len:23 al:3
...................................................UAAUUAUAUCAGAAGGAAGAAGACu................... len:25 al:27
...................................................UAAUUAUAUCAGAAGGgAGAAGA..................... len:23 al:3
...................................................UAAUUAUAUCAGAAGGAAG......................... len:19 al:13
...................................................UAAUUAUAUCAGAAGGAAGAgG...................... len:22 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAGu..................... len:23 al:24
...................................................UAAUUAUAUCAGAAGGAgGA........................ len:20 al:2
...................................................UAAUUAUAUCAGAAGGAAGAAG...................... len:22 al:205
...................................................UAAUUAUAUCAGgAGGAAGAAGA..................... len:23 al:5
...................................................aAAUUAUAUCAGAAGGAAGAAG...................... len:22 al:3
...................................................UAAUUgUAUCAGAAGGAAGAAGA..................... len:23 al:1
...................................................UAAUUAUAUCAGAAGGAAGAAu...................... len:22 al:14
...................................................UAAUUAUAUCgGAAGGAAGAAGA..................... len:23 al:5
...................................................UAAUUAUAUCAGAAGGAAGAAGAC.................... len:24 al:9
...................................................UAAUUAUAUCAGAAGuAAGA........................ len:20 al:1
...................................................UAAUUAUAaCAGAAGGAAGAAGA..................... len:23 al:2
...................................................UAAUUAUAUCAGAAGGAAGgAGA..................... len:23 al:8
...................................................UAAUUAUAUCAGAAGGAAGgAG...................... len:22 al:3
....................................................AAUUAUAUCAGAAGGAAGAAGACc................... len:24 al:1
....................................................AAUUAUAUCAGAAGGAAGAAGACu................... len:24 al:9
....................................................AAUUAUAUCAGAAGGAAGAAGg..................... len:22 al:4
....................................................AAUUAUAUCAGAAGGAAGAAGA..................... len:22 al:10
....................................................AAUUAUAUCAGAAGGAAGAAGACA................... len:24 al:1
....................................................AAUUAUAUCAGAAGGAAGA........................ len:19 al:6
....................................................AAUUAUAUCAGAAGGAAGAAGACg................... len:24 al:1
....................................................AAUUAUAUCAGAAGGAAGAAGAa.................... len:23 al:1
....................................................AAUUAUAUCAGAAGGAAGAAG...................... len:21 al:2
....................................................AAUcAUAUCAGAAGGAAGAAGA..................... len:22 al:1
.....................................................AUUAUAUCAGAAGGAAGA........................ len:18 al:2
.....................................................AUUAUAUCAGAAGGAAGAAG...................... len:20 al:1
.....................................................AUUAUAUCAGAAGGAAGAAGA..................... len:21 al:10
......................................................UUAUAUCAGAAGGAAGAAGA..................... len:20 al:5
......................................................UUAUAUCAGAAGGAAGAAGAu.................... len:21 al:4
......................................................UUAUgUCAGAAGGAAGA........................ len:17 al:2
......................................................UUAUAUCAGAAGGAAGAAGAa.................... len:21 al:2
.......................................................UAUAUCAGAAGGAAGAAGACu................... len:21 al:2
.......................................................UAUAUCAGAAGGAAGAAG...................... len:18 al:3
.......................................................UAUAUCAGAAGGAAGAAGA..................... len:19 al:3