Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_1503:47749-47842 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_11135.ps.pdf
Locus Name: Cluster_11135
AGGAUGUUGGUGGAGUGAGACACUAUACCAGUGUAGUCCUUGCAUGUUUCUUGUCAGGUCUAGGCUGGUUAGUUUUCUCUCUUUACACUUUAUG
.........((((((.((((.((((.((((((.(((.(((.(((.......))).))).))).))))))))))..)))).))))))........ (-34.70)
..GAcGUUGGUGGAGUGAGACA........................................................................ len:20 al:1
..GAUGUUGGUGGAGUGAGACA........................................................................ len:20 al:17
...AUGUUGGUGGAGUGAGACu........................................................................ len:19 al:1
...AUGUgGGUGGAGUGAGACA........................................................................ len:19 al:1
...AUGUUGGUGGAGUGAGAC......................................................................... len:18 al:1
...AUGUUGGUGGAGUGAGACA........................................................................ len:19 al:35
...AUGUUGGUGGAGUGAGAu......................................................................... len:18 al:1
...AUGUUGGUGGAGUGAGA.......................................................................... len:17 al:1
...AUGUUGGUGGAGUGAGACg........................................................................ len:19 al:1
....UGUUGGUGGAGUGgGACA........................................................................ len:18 al:1
....UGUUGGUGGAGUGAGACA........................................................................ len:18 al:33
....UGUcGGUGGAGUGAGACA........................................................................ len:18 al:1
......................CUAUACCAGUGUAGUCCU...................................................... len:18 al:16
......................CUAUACCAGUGUAGUCCUUGC................................................... len:21 al:44
......................CUAUgCCAGUGUAGUCCUU..................................................... len:19 al:1
......................CUAUACCAGUGUAGUCCUUGCu.................................................. len:22 al:11
......................CUAUgCCAGUGUAGUCCUUGCA.................................................. len:22 al:1
......................CUAUACCAGUGUgGUCCU...................................................... len:18 al:1
......................CUAUACCAGUGUAGUCCUUGCAc................................................. len:23 al:1
......................CUAUACCAGUGUAGUCCc...................................................... len:18 al:2
......................CcAUACCAGUGUAGUCCUUGC................................................... len:21 al:2
......................CUAUACCgGUGUAGUCCUUGCAU................................................. len:23 al:1
......................CUAUACCAGUGUAGUCCUUGu................................................... len:21 al:13
......................CUAUACCAGUGUAGUCCUgGCAU................................................. len:23 al:6
......................CUAUACCAGcGUAGUCCUUGCAU................................................. len:23 al:1
......................CUAUACCAGUGUAGUCCUcGCA.................................................. len:22 al:3
......................CUAUACCAGUGUAGUCCUUGCAUGUU.............................................. len:26 al:3
......................CUAUACCAGUGUAGUCCUUGg................................................... len:21 al:1
......................CUAUACCAGUGUAGUCCUUGCAUu................................................ len:24 al:9
......................CUAUACCAGUGUAGUCCUUGCA.................................................. len:22 al:252
......................CUAUgCCAGUGUAGUCCU...................................................... len:18 al:2
......................CUAUACCAGUGUAGUCCUUG.................................................... len:20 al:2
......................CUAUACCAGUGUAGUCCUc..................................................... len:19 al:2
......................CUAUACCAGcGUAGUCCUUGCA.................................................. len:22 al:2
......................CUAUACCAGUGUAGcCCUUGCA.................................................. len:22 al:1
......................CUAUACCAGUGUAGUCCUUGCc.................................................. len:22 al:1
......................CUAUACCAGUGUAGUCCUgGCAUGUUUCUUG......................................... len:31 al:1
......................CUAUACCAGUGUAGUCCUgGCA.................................................. len:22 al:7
......................CUAUACCAGUGUAGUCCUUu.................................................... len:20 al:2
......................CUAUACCAGUGUAGUCaUUGC................................................... len:21 al:1
......................CUAUACCAGUGUAGUCCUUa.................................................... len:20 al:2
......................CUAUACCAGUGUAGUCCUUGCAUa................................................ len:24 al:13
......................CUAUgCCAGUGUAGUCCUUGCAU................................................. len:23 al:1
......................CUAUACCAGUGUAGUCCUU..................................................... len:19 al:13
......................CUAUACCAGUGUAGUCCUUGCg.................................................. len:22 al:5
......................CUAUACCAGUGUAGUCCUUGCAU................................................. len:23 al:5
.......................UAUACCAGUGUAGUCCUUGCAUu................................................ len:23 al:30
.......................UAUACCAGUGUAGUCCUUGCAUa................................................ len:23 al:4
.......................UAUACCAGUGUAGUuCUUGCA.................................................. len:21 al:1
.......................UgUACCAGUGUAGUCCUUGCA.................................................. len:21 al:3
.......................UAUACCAGUGUAGUCCUUGCg.................................................. len:21 al:4
.......................UAUACCAGUGUAGUCaUU..................................................... len:18 al:2
.......................UAUACCAGUGUAGUCCUUGCu.................................................. len:21 al:7
.......................UAUACCAGUGUAGUCCUUGCAU................................................. len:22 al:6
.......................UAUACCAGUGcAGUCCUUGCA.................................................. len:21 al:1
.......................UAUACCAGUGUAGUCCUUGa................................................... len:20 al:1
.......................UAUACCAGUGUAGUCCUUGCAa................................................. len:22 al:1
.......................UAUACCAGUGUAGUCCUUGCAUGUUU............................................. len:26 al:6
.......................UAUACCAGUGUAGUCCUg..................................................... len:18 al:2
.......................UAUgCCAGUGUAGUCCUUGC................................................... len:20 al:2
.......................UAUACCAGUGUAGUCCUgGCAU................................................. len:22 al:4
.......................UAUACCAGUGUAGUCCUUGCc.................................................. len:21 al:3
.......................UAUACuAGUGUAGUCCUUGCA.................................................. len:21 al:2
.......................UAUACCAGUGUAGUCCcUGCA.................................................. len:21 al:2
.......................aAUACCAGUGUAGUCCUUGCA.................................................. len:21 al:1
.......................UAUACCAGUGUAGUCCUUGCAUaUU.............................................. len:25 al:3
.......................UAUACCAGUGUAGUCCUUu.................................................... len:19 al:1
.......................UAUAuCAGUGUAGUCCUU..................................................... len:18 al:1
.......................cAUACCAGUGUAGUCCUUGCA.................................................. len:21 al:1
.......................UAUACCAGUGUAGUCCgU..................................................... len:18 al:1
.......................UAUACCAGUGUAGUCCUUGCA.................................................. len:21 al:245
.......................UAUACCAGUGUAGUCCUc..................................................... len:18 al:3
.......................UAUACCAGUGUAGUCCU...................................................... len:17 al:3
.......................UgUACCAGUGUAGUCCUU..................................................... len:18 al:3
.......................UAUACCAGUGUAGUCCUUGCAcGUUU............................................. len:26 al:2
.......................UAUACCAGUGUAGUCuUU..................................................... len:18 al:2
.......................UAUACCAGUGUAGUCCUUGC................................................... len:20 al:74
.......................UAUACCAGUGUAGUCCUUG.................................................... len:19 al:17
.......................UAUACCAGUGUAGUCCUUa.................................................... len:19 al:2
.......................UAUACCAGUGUAGUCCUUaC................................................... len:20 al:1
.......................UAUACCAGUGUAGUCCUUGu................................................... len:20 al:64
.......................UAUACCAGUGUAGUCCUUGCAg................................................. len:22 al:1
.......................UAUACCAGUGUAGUCCUUaCA.................................................. len:21 al:1
.......................UAUACCAcUGUAGUCCUUGCA.................................................. len:21 al:1
.......................UAUACCAGUGUAGUCCUUGuA.................................................. len:21 al:2
.......................UAUACCAGUGUAGUCCaU..................................................... len:18 al:1
.......................UAUACCAGUGcAGUCCUU..................................................... len:18 al:1
.......................UAUACCAGUGUAGUCCUUGCAUc................................................ len:23 al:8
.......................UAUACCAGUGUAGUCCUU..................................................... len:18 al:60
.......................UAUACCAaUGUAGUCCUUGCA.................................................. len:21 al:2
.......................UAUACCgGUGUAGUCCUUGCA.................................................. len:21 al:2
........................AUACCAGUGUAGUCCUUGC................................................... len:19 al:1
........................AUACCAGUGUAGUCCUUGCA.................................................. len:20 al:34
........................AUACCAGUGUAGUCCUUGCg.................................................. len:20 al:2
.........................UACCAGUGUAGUCCUU..................................................... len:16 al:2
.........................UACCAGUGUAGUCCUUGCA.................................................. len:19 al:5
.........................UACCAGUGUAGUCCUUGCu.................................................. len:19 al:1
.........................UACCAGUGUAGUCCUUGCAUa................................................ len:21 al:1
.........................UACCAGUGUAGUCCU...................................................... len:15 al:1
...........................CCAGUGUAGUCCUUGCAUa................................................ len:19 al:1
...........................................AUGUUUCUUGUCAGGUCUAGGCUGGUUAG...................... len:29 al:1
...........................................AUGUUUCUUGUCAGGUCUAGGCUGGUU........................ len:27 al:3
...........................................AUGUUUCUUGUCAGGUCU................................. len:18 al:6
...........................................AUGUUUCUUGUCAGGUCc................................. len:18 al:1
............................................UGUUUCcUGUCAGGUCUAGGCUGGUUAGUUU................... len:31 al:2
............................................UGUUUCUUGUCAGGUCUAGGCUGGUc........................ len:26 al:4
............................................UGUUUCUUGUCAGGUCUAGGCUGGUUAGUUc................... len:31 al:2
............................................UGUUUCUcGUCAGGUCUAGGCUGGUUAGUU.................... len:30 al:1
............................................UGUUUCUUGUCAGGUCUAGGCUGGUUAGUUU................... len:31 al:47
............................................UGUUUCUUGUCAGGUCUAGGCUGGUa........................ len:26 al:1
............................................UGUUUCUUGUCAGGUCUAGGCUGGUU........................ len:26 al:24
............................................UGUUUCUUGUCAGGUCUAGGCUGGUUAGUU.................... len:30 al:44
............................................UGUUUCUUGUCAGGUCUAGGCUGGUUAGgU.................... len:30 al:1
.............................................GUUUCUUGUCAGGUCUAGGCUGGUU........................ len:25 al:2
.............................................GUUUCUUGUCAGGcCUAGGCUGGUU........................ len:25 al:2
.............................................GUUUCUUGUCAGGUCUAGGCUGGUUAGUUU................... len:30 al:1
.............................................GUUUCUUGUCAGGUCUAGGCUGGUUAGUUc................... len:30 al:1
.............................................GUUUCUUGUCAGGUCUAGGCUGGUUgGUUUU.................. len:31 al:1
.............................................GUUUCUUGUCAGGUCUAGGCUGGUc........................ len:25 al:1
.............................................GUUUCUUGUCAGGUCUAGGCUGGUUAGU..................... len:28 al:3
...............................................UUCUUGUCAGGUCUAGGCUGGUU........................ len:23 al:5
.................................................CUUGUCAGGUCUAGGCUGGUU........................ len:21 al:1
.................................................CUUGUCAGGUCUAGGCUGGUUAGUUU................... len:26 al:4
..................................................UUGUCAGGUCUAGGCUGGUU........................ len:20 al:1
..................................................UUGUCAGGUCUAGGCUGGUUAGUU.................... len:24 al:1
...................................................UGUCAGGUuUAGGCUGGUU........................ len:19 al:1
...................................................UGUCAGGUCUAGGCUGGUc........................ len:19 al:1
...................................................UGUCAGGUCUAGGCUGGUUAGc..................... len:22 al:4
...................................................UGUCAGGUCUAGGCUGGUUAGU..................... len:22 al:24
...................................................UGUCAGGUCUAGGCUGGU......................... len:18 al:7
...................................................UGUCAGGUCUAGGCUGGUU........................ len:19 al:4
...................................................UGUCAGGUCUAGGCUGGUUAGUUU................... len:24 al:8
...................................................UcUCAGGUCUAGGCUGGUUAGUUU................... len:24 al:1
...................................................UGUCAGGUCUAGGCUGGgU........................ len:19 al:2
...................................................UGUCAGGUCUAGGCUGGa......................... len:18 al:1
...................................................UGUCAGGUCUAGGCUGGUUAG...................... len:21 al:1
....................................................cUCAGGUCUAGGCUGGUUAGUUU................... len:23 al:4
....................................................aUCAGGUCUAGGCUGGUUAGUUU................... len:23 al:1
.....................................................UCAGGUuUAGGCUGGUUAGUUUU.................. len:23 al:3
.....................................................UCAGGUCUAGGCUGGUUuGUUUU.................. len:23 al:1
.....................................................UCAGGUCUAGGCUGGUUAGUUc................... len:22 al:11399
.....................................................UCAGGUCUgGGCUGGUUAG...................... len:19 al:2
.....................................................UCAGGUCUAGGgUGGUUAGUUU................... len:22 al:12
.....................................................UCuGGUCUAGGCUGGUUAGUUU................... len:22 al:123
.....................................................UCAGGUCUAGGCgGGUUAGU..................... len:20 al:2
.....................................................UCAGGUCUAGGCUGGUUAGUUU................... len:22 al:151922
.....................................................UCAGGUCUAGGCUGGcUAGUUUU.................. len:23 al:19
.....................................................UCAGGUCUAGGCUGGUUAGcUUU.................. len:23 al:11
.....................................................UCAGGUCUAGGCUGaUUAGUU.................... len:21 al:8
.....................................................UCAGGUCUAGGCaGGUUAGUUUU.................. len:23 al:3
.....................................................UCAGGUCUAGGCUGGaUAGUUUU.................. len:23 al:2
.....................................................UCAGGUCUAGGCUGGUUAGUUUUu................. len:24 al:433
.....................................................UCAGGUCUAGGCUGGUUAGUUUUuU................ len:25 al:49
.....................................................UCAGGUCUAGGCUGuUUAGUUUU.................. len:23 al:2
.....................................................UCAGGUCUAGGCUGGUUAGUUUUaU................ len:25 al:27
.....................................................UCAGGUCUAGGCUGGUcAGUU.................... len:21 al:17
.....................................................UCAGGUuUAGGCUGGUUAGU..................... len:20 al:1
.....................................................UCAGGUCUAGGCUGGUUAaU..................... len:20 al:2
.....................................................UCAGGUCUAGGCUGGgU........................ len:17 al:1
.....................................................UCAGGUCUAaGCUGGUUAGUUUU.................. len:23 al:2
.....................................................UCAGGcCUAGGCUGGUUAGUUU................... len:22 al:624
.....................................................UCAGGUCUAGGCUGaUUAGUUUU.................. len:23 al:3
.....................................................UCuGGUCUAGGCUGGUUAGU..................... len:20 al:2
.....................................................UCAGGUCUAGGCUuGUUAGU..................... len:20 al:1
.....................................................UCAGGUCgAGGCUGGUUAGUU.................... len:21 al:3
.....................................................UCAGGUCUAGGCUGGUUAu...................... len:19 al:255
.....................................................UCAGGUCUAGGCUGGUUAc...................... len:19 al:14
.....................................................UaAGGUCUAGGCUGGUUAGU..................... len:20 al:1
.....................................................gCAGGUCUAGGCUGGUUAGU..................... len:20 al:1
.....................................................UCAGGUCaAGGCUGGUUAGUUU................... len:22 al:23
.....................................................UCAGGUCUAGGCUGGUcAGUUUUC................. len:24 al:1
.....................................................UCAGGUCUAGGCUGGUUAGUg.................... len:21 al:55
.....................................................UCAGGUCUAGGCUGGUUg....................... len:18 al:3
.....................................................UCAGGUCUAGGCUGGUUAGUUUU.................. len:23 al:5365
.....................................................UCAGGUCUAGGgUGGUUAGU..................... len:20 al:1
.....................................................UCAGGUCUAGGCUGGgUAGUUUU.................. len:23 al:2
.....................................................UCAGGUCUAGGCUuGUUAGUUUU.................. len:23 al:1
.....................................................UCAGGUuUAGGCUGGUUAGUU.................... len:21 al:16
.....................................................UCAGGUCUAGGCUGGUUAGUa.................... len:21 al:94
.....................................................UuAGGUCUAGGCUGGUUAGUUUU.................. len:23 al:6
.....................................................UCAGGUCcAGGCUGGUUAGU..................... len:20 al:18
.....................................................UCAGGUCUAuGCUGGUUAGUU.................... len:21 al:6
.....................................................UCAGGUCUcGGCUGGUUAGUUU................... len:22 al:18
.....................................................UCAGGUCUAGGCUGGUUAaUUUU.................. len:23 al:1
.....................................................UCAGGUCUAGGuUGGUUAGUUUU.................. len:23 al:6
.....................................................UCAGGUgUAGGCUGGUUAGUU.................... len:21 al:1
.....................................................UCAGGUCUAGuCUGGUUAGUU.................... len:21 al:3
.....................................................UuAGGUCUAGGCUGGUUAGUU.................... len:21 al:4
.....................................................UCAGGUCUAuGCUGGUUAGUUUU.................. len:23 al:2
.....................................................UCAGGUCUAGGCUGGUUAGUaU................... len:22 al:170
.....................................................UCAGGUCUAGGCUGGUUAuUUUU.................. len:23 al:2
.....................................................UCAGGUCUAGGCUGGUaAGUUU................... len:22 al:10
.....................................................UCAGGUCUAGGCUGGUUAGUUcU.................. len:23 al:13
.....................................................UCAGuUCUAGGCUGGUUAGUUU................... len:22 al:5
.....................................................cCAGGUCUAGGCUGGUUA....................... len:18 al:1
.....................................................UCAGGUCUAGGCUGGUUcGU..................... len:20 al:1
.....................................................cCAGGUCUAGGCUGGUUAGUUUU.................. len:23 al:28
.....................................................UCgGGUCUAGGCUGGUUAGUUU................... len:22 al:675
.....................................................UCAGGUCUAGGCUGGaUAGU..................... len:20 al:1
.....................................................UCAGGUCcAGGCUGGUUAGUUUU.................. len:23 al:18
.....................................................UCAGGUCUgGGCUGGUUAGU..................... len:20 al:13
.....................................................UCAGGUCUAGGaUGGUUAGU..................... len:20 al:5
.....................................................UCAGGUCUAGGCUGGgUAGUUU................... len:22 al:33
.....................................................UCAGGUaUAGGCUGGUUAGUUUU.................. len:23 al:1
.....................................................UCAGGgCUAGGCUGGUUAGUU.................... len:21 al:3
.....................................................aCAGGUCUAGGCUGGUUAGUUU................... len:22 al:358
.....................................................UCAGGUCUAGGCaGGUUAGUUU................... len:22 al:96
.....................................................UCAGGUCUAGGCUGGUUA....................... len:18 al:75
.....................................................UCAGGUCUAGGCUaGUUAGUU.................... len:21 al:15
.....................................................UCAGGaCUAGGCUGGUUAGUU.................... len:21 al:6
.....................................................UCAGGUCUAGGCUGGcUAGUU.................... len:21 al:57
.....................................................UCAGGUCUAGGCUGaUUAGU..................... len:20 al:7
.....................................................UCAGGUCUAGGCUGGUUAGgUU................... len:22 al:39
.....................................................UCAGGUCUAGGCUGGaUAGUUU................... len:22 al:42
.....................................................UCAGGUCUAGGCUGGUUgGU..................... len:20 al:25
.....................................................UCAGaUCUAGGCUGGUUAGUU.................... len:21 al:1
.....................................................UCAGGUCUAGGCUGcUUAGUUUU.................. len:23 al:1
.....................................................UCAGGUCUAaGCUGGUUAGU..................... len:20 al:4
.....................................................UCAGGUCUAGGCUGGUUAGUUUg.................. len:23 al:3
.....................................................UaAGGUCUAGGCUGGUUAGUUU................... len:22 al:77
.....................................................UCAGGUCgAGGCUGGUUAGUUU................... len:22 al:12
.....................................................UCAGGUCUAGGCUGGUUAGcUU................... len:22 al:253
.....................................................aCAGGUCUAGGCUGGUUAGUU.................... len:21 al:40
.....................................................UCAGGUCUAGGCcGGUUAGUU.................... len:21 al:65
.....................................................UCAGGUCUgGGCUGGUUAGUUU................... len:22 al:582
.....................................................UCuGGUCUAGGCUGGUUAGUU.................... len:21 al:8
.....................................................UCAGGUCUAGGCUcGUUAGU..................... len:20 al:2
.....................................................UCAGGUCUAGGCUGGUUAuU..................... len:20 al:27
.....................................................UCAGGUCUAGGCUGGcUAGUUU................... len:22 al:505
.....................................................UCAGGUCUAGGaUGGUUAGUU.................... len:21 al:1
.....................................................UCAGGUCUAGGCUGGUUAa...................... len:19 al:4
.....................................................UCAGGUCUAGGCcGGUUAGUUUU.................. len:23 al:21
.....................................................UCAGGUCUAGGCUGGUUuGU..................... len:20 al:74
.....................................................UCAGGUCUAGGCUcGUUAGUU.................... len:21 al:4
.....................................................UCAGGUCUAGGCUGGUUAcU..................... len:20 al:4
.....................................................UCAGGUCUAGGCUGGUUAGUUg................... len:22 al:233
.....................................................UCAGGUCUAGaCUGGUUAGUUUU.................. len:23 al:6
.....................................................UCAGGUCUAGGCcGGUUA....................... len:18 al:1
.....................................................UCAGGUCUAGGCUGGUUAGUcUU.................. len:23 al:8
.....................................................UCAGGUCUAGGCUGGUcAGUUU................... len:22 al:275
.....................................................UCAGGUCUAGGCgGGUUAGUUU................... len:22 al:30
.....................................................UCAGGcCUAGGCUGGUUAGU..................... len:20 al:27
.....................................................UCAGGcCUAGGCUGGUUAGUUUU.................. len:23 al:13
.....................................................UCAGGUCUAGGuUGGUUAGU..................... len:20 al:9
.....................................................UCAGGUCUAGGCUGGUUAGUUUUuUC............... len:26 al:2
.....................................................UCAGGUgUAGGCUGGUUAGUUU................... len:22 al:2
.....................................................UCAGGUCUAGGCUGGUUAGUUUUuUCU.............. len:27 al:1
.....................................................UCAGGUCUAGGCUGGUUAuUU.................... len:21 al:14
.....................................................UCAGGUCUAGGCUGuUUAGUUU................... len:22 al:12
.....................................................UCAGGUCUAcGCUGGUUAGUUU................... len:22 al:4
.....................................................UCAGGUCaAGGCUGGUUAGUUUU.................. len:23 al:1
.....................................................UCAGGUCUAGGCUGGUUAGa..................... len:20 al:28
.....................................................UCAGGUCUAGGCUGGgUA....................... len:18 al:2
.....................................................UCAGGUCUAGGCUGGUUAGUaUU.................. len:23 al:25
.....................................................UCAGGUCUAGGCUcGUUAGUUU................... len:22 al:11
.....................................................UCAGGUCUAGGCUGGUUcGUUU................... len:22 al:20
.....................................................UCAGGUCUAGGCaGGUUAGUU.................... len:21 al:4
.....................................................UCAGGUCUAGGCUGGUUAGUUUUC................. len:24 al:13
.....................................................UCuGGUCUAGGCUGGUUAGUUUU.................. len:23 al:1
.....................................................UCAGGUCUAGGuUGGUUAGUU.................... len:21 al:22
.....................................................UCAGGUCcAGGCUGGUUAGUU.................... len:21 al:42
.....................................................UCAGGUCUAGGCUGGgUAGU..................... len:20 al:1
.....................................................UCAGGUaUAGGCUGGUUAGUUU................... len:22 al:17
.....................................................UCAGGUCUAGGCUGuUUAGUU.................... len:21 al:3
.....................................................UCAGGUCUAGGCUGGUUAGUUgU.................. len:23 al:24
.....................................................UCAGGUCUAaGCUGGUUAGUU.................... len:21 al:11
.....................................................UgAGGUCUAGGCUGGUUAGUU.................... len:21 al:1
.....................................................UCAGGUCUAaGCUGGUU........................ len:17 al:1
.....................................................UCAGGUuUAGGCUGGUUAGUUU................... len:22 al:53
.....................................................UCAGGUCUAGGCUaGUUAGUUUU.................. len:23 al:6
.....................................................UCAGGUCUAGGCUGGUUAGUcUUC................. len:24 al:1
.....................................................UCAGGUCUAGGCUGGUUc....................... len:18 al:1
.....................................................UCAGGUCUAGGCUuGUUAGUUU................... len:22 al:19
.....................................................UCAGGUCUAGGCcGGUUAGU..................... len:20 al:24
.....................................................UCAGGUCUAGGCgGGUUAGUU.................... len:21 al:1
.....................................................UCAGGaCUAGGCUGGUUAGUUU................... len:22 al:47
.....................................................UCAGGUCUAGGCUGGUg........................ len:17 al:1
.....................................................aCAGGUCUAGGCUGGUUAGUUUU.................. len:23 al:16
.....................................................UCAGGUCUAGGCUGGUUAGUUUaC................. len:24 al:39
.....................................................UCAGGUCUAGGCUGGUUAGaU.................... len:21 al:7
.....................................................UCAGcUCUAGGCUGGUUAGUUU................... len:22 al:5
.....................................................UCAGGUCUAGGCUGGUUAGaUU................... len:22 al:32
.....................................................UCAGGUCUAGGCcGGUUAGUUU................... len:22 al:478
.....................................................UCAGGUCcAGGCUGGUUAGUUU................... len:22 al:398
.....................................................UCAGGUCUAGGCUGcUUAGUUU................... len:22 al:6
.....................................................UCAGGUCUuGGCUGGUUAGUUU................... len:22 al:32
.....................................................cCAGGUCUAGGCUGGUUAGUUU................... len:22 al:776
.....................................................UCAGGUCUAuGCUGGUUAGUUU................... len:22 al:23
.....................................................UCAGGUCUAGGCUGGUgAGUU.................... len:21 al:2
.....................................................UCAGGUCUAGGuUGGUUAGUUU................... len:22 al:160
.....................................................UCAGGUCUAGGCUGGUUAGUc.................... len:21 al:1737
.....................................................UCAGGUCUAGGCUGGUUAG...................... len:19 al:100
.....................................................UCAGGgCUAGGCUGGUUAGU..................... len:20 al:1
.....................................................UCAGGUCUAGGCUGGUUgGUUU................... len:22 al:413
.....................................................UCAGGUCUAGGCUGGUUAGUUUUa................. len:24 al:8
.....................................................UCAGGUCUAGGCUGGUUAGUU.................... len:21 al:16146
.....................................................UCAGGUCUAGGCUGGUcAGUUUU.................. len:23 al:12
.....................................................aCAGGUCUAGGCUGGUUAGU..................... len:20 al:6
.....................................................UCAGGUCUAGGCUGGUUgG...................... len:19 al:1
.....................................................UCAGGgCUAGGCUGGUUAGUUU................... len:22 al:17
.....................................................UCAGGUCUAGaCUGGUUAGU..................... len:20 al:5
.....................................................UCAGGUCUAGGCUGGUUAGgU.................... len:21 al:124
.....................................................UCAGGUCUAGGCUGGUUAGUUUc.................. len:23 al:249
.....................................................UCAGGUCUAGcCUGGUUAGUUU................... len:22 al:9
.....................................................UCAGGUaUAGGCUGGUUAGU..................... len:20 al:1
.....................................................UCAGGUCUAGGCUGGUUu....................... len:18 al:34
.....................................................UCAGGUCUgGGCUGGUUAGUUUU.................. len:23 al:25
.....................................................UCAGGgCUAGGCUGGUUAGUUUU.................. len:23 al:2
.....................................................UCAGGUCaAGGCUGGUUAGU..................... len:20 al:1
.....................................................UCAGaUCUAGGCUGGUUAGUUU................... len:22 al:4
.....................................................UCAGGUCUAGGCUaGUUAGU..................... len:20 al:4
.....................................................UCgGGUCUAGGCUGGUUAGUUUU.................. len:23 al:23
.....................................................UCAGGUCUAGGCUGGUa........................ len:17 al:2
.....................................................UgAGGUCUAGGCUGGUUAGUUU................... len:22 al:5
.....................................................gCAGGUCUAGGCUGGUUAGUUU................... len:22 al:15
.....................................................UCAGGUCUAGGCaGGUUAGU..................... len:20 al:4
.....................................................UCAGGUCUAGaCUGGUUAGUUU................... len:22 al:152
.....................................................UCAGGUCUAGGCUGGUUAGU..................... len:20 al:5849
.....................................................UCAGGUCUAGGCgGGUUAGUUUU.................. len:23 al:1
.....................................................UCAGGUCUAGGCUGGUUgGUUUU.................. len:23 al:11
.....................................................UCAGGaCUAGGCUGGUUAGUUUU.................. len:23 al:1
.....................................................UCAGGUCUAGGCUGGUU........................ len:17 al:99
.....................................................UCAGGcCUAGGCUGGUUAGUU.................... len:21 al:80
.....................................................UCAGGUCUAGGCUGGUUgGUU.................... len:21 al:45
.....................................................UCAGGUaUAGGCUGGUUAGUU.................... len:21 al:1
.....................................................cCAGGUCUAGGCUGGUUAGUU.................... len:21 al:92
.....................................................UCAGGUCUAGGCUGGcUAGU..................... len:20 al:11
.....................................................gCAGGUCUAGGCUGGUUAGUU.................... len:21 al:1
.....................................................UCAGGUCUAGGCUGGUc........................ len:17 al:5
.....................................................UCAGGUCUcGGCUGGUUAGUU.................... len:21 al:4
.....................................................UCAGGUCUAGGaUGGUUAGUUU................... len:22 al:20
.....................................................UaAGGUCUAGGCUGGUUAGUU.................... len:21 al:4
.....................................................cCAGGUCUAGGCUGGUU........................ len:17 al:2
.....................................................UCAGGUCUAGGCUGGUUAcUUU................... len:22 al:3
.....................................................UCAGGUCUAGGCUuGUUAGUU.................... len:21 al:1
.....................................................UCAGGUCUAGGCUGGUUuGUUU................... len:22 al:13
.....................................................UCAGGUCUgGGCUGGUUAGUU.................... len:21 al:74
.....................................................UCAGGUCUAGGCUGGUUAGcU.................... len:21 al:64
.....................................................UCAGGUCUAGGCUaGUUAGUUU................... len:22 al:185
.....................................................UCgGGUCUAGGCUGGUUAGUU.................... len:21 al:55
.....................................................UCAGGUCUAGGCUGGUUAGUUUUCU................ len:25 al:5
.....................................................UCAGGUCUAGGCUGGUUAuUUU................... len:22 al:10
.....................................................UCAGGUCUAGGCUGGUUAGUcU................... len:22 al:362
.....................................................UCAGGUCUAGGCUGGUUAGUUa................... len:22 al:403
.....................................................UCAGGUCUAGcCUGGUUAGUUUU.................. len:23 al:5
.....................................................UuAGGUCUAGGCUGGUUAGUUU................... len:22 al:166
.....................................................UCAGGUCUAGGCUGaUUAGUUU................... len:22 al:86
.....................................................UgAGGUCUAGGCUGGUUAGU..................... len:20 al:1
.....................................................UCAGGUCUAGGCUGGUUAGUUaU.................. len:23 al:349
.....................................................UCAGGUCUAGGCUGGUUAGUUUa.................. len:23 al:638
.....................................................UCAGGUCaAGGCUGGUUAGUU.................... len:21 al:3
.....................................................UCAGGUCUAGGCUGGUUAGUUUcC................. len:24 al:2
.....................................................UCAGGUCUAGaCUGGUUAGUU.................... len:21 al:16
.....................................................UCAGGUCUAGGCUGGUUAGUUUUCa................ len:25 al:2
.....................................................UCAGGUCaAGGCUGGUUAG...................... len:19 al:1
.....................................................UCAGGUCUAGGCUGGUUAaUU.................... len:21 al:3
.....................................................UCAGGUCUAGGCUGGUUAGaUUU.................. len:23 al:5
.....................................................UCAGGUCUAGGCUGGUaAGUU.................... len:21 al:1
.....................................................UCAGGUCUAGGCUGGUgAGUUU................... len:22 al:7
.....................................................UCgGGUCUAGGCUGGUUAGU..................... len:20 al:26
.....................................................UCAGGUCUAGGCUGGUUuGUU.................... len:21 al:5
.....................................................UCAGGUCUAGGCUGGU......................... len:16 al:5
.....................................................cCAGGUCUAGGCUGGUUAGU..................... len:20 al:26
.....................................................UCAGGUCUAGGCaGGUUA....................... len:18 al:1
.....................................................UCAGGUCUAaGCUGGUUAGUUU................... len:22 al:92
.....................................................cCAGGUCUAGGCUGGUUAGUUUUCU................ len:25 al:2
.....................................................UCAGGUCUAGGCUGGaUAGUU.................... len:21 al:6
.....................................................UCAGGUCUAGuCUGGUUAGUUU................... len:22 al:15
.....................................................UCAGGUCUAGGCUGGUcAGU..................... len:20 al:4
.....................................................UCAGGUCUAGGCUGGUUAGc..................... len:20 al:709
.....................................................UCAGGUCUAGGCUGGUUAaUUU................... len:22 al:31
.....................................................UuAGGUCUAGGCUGGUUAGU..................... len:20 al:4
.....................................................UCAGGUCUAGGCUGGUUAGg..................... len:20 al:51
.....................................................UCAGGUCUAGGCUGGUUAGUgU................... len:22 al:703
.....................................................UCAGGUCUAGGCUGGUUcGUU.................... len:21 al:2
......................................................CAGGUCUAGGCUGGUUAGU..................... len:19 al:5
......................................................CAGGUCUAGaCUGGUUAGUUU................... len:21 al:1
......................................................CAGGUCUAGGCUGGUUAGUUc................... len:21 al:15
......................................................CAGGUCUAGGCUGGUUAGUgU................... len:21 al:1
......................................................CAGGUCUAGGCUGGUUAGUUU................... len:21 al:180
......................................................gAGGUCUAGGCUGGUUAGUUU................... len:21 al:1
......................................................uAGGUCUAGGCUGGUUAGUU.................... len:20 al:1
......................................................CAGGUCUAGGCUGGUUAGUcU................... len:21 al:1
......................................................CAGGUCUAGGCUGGUUAGUUUUu................. len:23 al:1
......................................................CAGGUCUAGGCUGGUUAGUU.................... len:20 al:22
......................................................CAGGUCUAGGCUGGUUAGUc.................... len:20 al:5
......................................................uAGGUCUAGGCUGGUUAGUUU................... len:21 al:1
......................................................CAGGUCUAGGCUGGgUAGUU.................... len:20 al:1
......................................................CAGGUCUAuGCUGGUUAGUUU................... len:21 al:1
......................................................CAGGUCUAGGCUGGUUAGUUUU.................. len:22 al:5
......................................................CAGGUCUAGGCUGGUUAGUUa................... len:21 al:2
......................................................uAGGUCUAGGCUGGUUAGU..................... len:19 al:1
......................................................CAGGUCUAGGCUGGUUAGc..................... len:19 al:2
.......................................................AGGUCUAGGCUGGUUAGUUU................... len:20 al:85
.......................................................gGGUCUAGGCUGGUUAGUUU................... len:20 al:1
.......................................................AGGUCUAGGCUGGUUAGUU.................... len:19 al:12
.......................................................AGGUCUAGGCUGGUUAGcUU................... len:20 al:1
.......................................................AGGUCUAGGCUGGUUAGUUa................... len:20 al:1
.......................................................AGGUCUAGGCUGGUUAGU..................... len:18 al:3
.......................................................AGGUCUAGGCUGGUUAGUUc................... len:20 al:6
.......................................................AGGUCUAGGCUGGUUAGUUUU.................. len:21 al:4
.......................................................AGGUCUAGGCUGGUUgGUU.................... len:19 al:1
........................................................GGUCUAGGCUGGUUAGUUU................... len:19 al:22
........................................................GGUCUAGGCUGGUUAGUUc................... len:19 al:2