Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_1415:72049-72142 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/E-Peve/output/05-Peve-sRNA-ShortStack_4.1.0/ShortStack_out/strucVis/Cluster_10934.ps.pdf
Locus Name: Cluster_10934
UGACGGACGGGUUUGAUUUCUCAGUCACACUAAUUCACCUUCCAUUUAAUGACAGGUGAAUGUUGUGUGAUCGCAGAAGUCAAGUCACUAAACA
.........(((((((((((((.(((((((..((((((((..(((...)))..))))))))...))))))).).))))))))))))........ (-32.40)
.GACGGACGGGUUUGAUUUCUC........................................................................ len:21 al:1
..ACGGACGGGUUUGAUUUCUC........................................................................ len:20 al:3
....................UCAGUCACACUAAUUCACCUUCCA.................................................. len:24 al:1
....................UCAGUCACACUAAUUCACCUUCC................................................... len:23 al:1
....................UCAGUCACACUAAUUCACCUUC.................................................... len:22 al:2
....................UCAGUCACACUAAUUCACCUc..................................................... len:21 al:1
....................UCAGUCACACUAAUUCACCUa..................................................... len:21 al:1
....................UCAGUCACACUAAUUCACCUU..................................................... len:21 al:6
.....................CAGUCACACUAAUUCACCUUCC................................................... len:22 al:4
......................AGUCACACUAAUUCACCaU..................................................... len:19 al:4
......................AGUCACACUAAUUCACCUUCa................................................... len:21 al:3
......................AGUCACACUAAUUCACCUUC.................................................... len:20 al:7
......................AGUCACACUAAUUCACCU...................................................... len:18 al:2
......................AGUCACACUAAUUaACCUU..................................................... len:19 al:1
......................AGUCACACUAAUUCACCUUCC................................................... len:21 al:22
......................AGUCACACUAAUUCACCUUCCu.................................................. len:22 al:1
......................AGUCACACUAAUUCACCUUCCA.................................................. len:22 al:35
......................AGUCACACUAAUUCACCUUCCAU................................................. len:23 al:5
......................AGUCACACUAAUUCACCUUCCAgU................................................ len:24 al:1
......................AGUCgCACUAAUUCACCUUCCA.................................................. len:22 al:1
......................AGcCACACUAAUUCACCUUCCA.................................................. len:22 al:1
......................AGUCACACUAAUUCACCUUCCAc................................................. len:23 al:1
......................AGUCACACUAAUUCACCUc..................................................... len:19 al:2
......................AGUCACACUAAUUCACCUUCCAUU................................................ len:24 al:1
......................AGUCACACUAAUUCACCUU..................................................... len:19 al:19
......................AGUCACACUAAUUCACCUUCCAUUg............................................... len:25 al:1
......................AGUCACACUAAUUCACCUUa.................................................... len:20 al:1
......................AGUCACACUAAUUCACCUUCCAUUU............................................... len:25 al:1
......................AGcCACACUAAUUCACCUUCC................................................... len:21 al:1
......................AGUCACACUAAUUCACCUUCu................................................... len:21 al:3
.......................GUCAaACUAAUUCACCUUCC................................................... len:20 al:2
........................UCACACUAAUUCACCUUCC................................................... len:19 al:1
..........................................CAUUUAAUGACAGGUGAAUGUUGUGU.......................... len:26 al:1
............................................UUUAAUGACAGGUGAAUGUUGUGUGAcC...................... len:28 al:1
................................................AUGACAGGUGAAUGUUGUGUGAUCGCc................... len:27 al:1
................................................AUGACAGGUGAAUGUUGUGUGAUCGCu................... len:27 al:4
..................................................GACAGGUGAAUGUUGUGUGAUCGCc................... len:25 al:1
...................................................ACAGGUGAAgGUUGUGUGAUCGC.................... len:23 al:1
...................................................ACAGGUGAAUGUUGUGUGAUCGCu................... len:24 al:218
...................................................ACAGGUGAAUGUUGUGUGAcCGCA................... len:24 al:1
...................................................ACAGGUGAAUGUUGUGcGAUC...................... len:21 al:1
...................................................ACAGGUGAAUGcUGUGUGAUCGC.................... len:23 al:1
...................................................ACAGGUGAAUGUUGUGUG......................... len:18 al:2
...................................................ACAGGUGAAUGUUGUGUGAUCGCc................... len:24 al:28
...................................................ACAGGUGAAUGUUGUGUGAUCGg.................... len:23 al:1
...................................................ACAGGUGAAUGUUGUGUGAUCGCAu.................. len:25 al:7
...................................................ACAGGUGAAUGUUGUGUGgU....................... len:20 al:1
...................................................ACAGGcGAAUGUUGUGUGAU....................... len:20 al:1
...................................................ACAGGUGgAUGUUGUGUGAUCGC.................... len:23 al:1
...................................................ACAGGUGAAUGUUGUGUGAUCGCA................... len:24 al:4
...................................................ACAGGUGAAUGUUGUGUGAUCGCAGc................. len:26 al:2
...................................................ACAGGUGAAUGUUGUGUGAUu...................... len:21 al:1
...................................................ACgGGUGAAUGUUGUGUGAUCGC.................... len:23 al:1
...................................................ACAGGUGAAUGUUGUGUGAUCGCAc.................. len:25 al:1
...................................................ACAGGUGAAUGUUGUGUGAUCa..................... len:22 al:2
...................................................ACAGGUGAgUGUUGUGUGAUC...................... len:21 al:1
...................................................ACAGGUGAAUGUUGUGUGAUCGa.................... len:23 al:4
...................................................ACAGGUGAAUGUUGUGUGAc....................... len:20 al:2
...................................................ACAGGUGAAUGUUGUGUGgUCGC.................... len:23 al:2
...................................................ACAGGUGAAUGUUGUGUGAUCGCAGu................. len:26 al:4
...................................................ACAGGUGAAUGUUGUGUGAUCGuA................... len:24 al:1
...................................................ACAGGUGAAUGUUGUGUGAUCGC.................... len:23 al:153
...................................................ACAGGUGAAUGUUGUGU.......................... len:17 al:56
...................................................ACAGGUGAAUGUUGUGUGAUCGCg................... len:24 al:4
...................................................ACAGGUGAAUGUUGUGUGAUCu..................... len:22 al:2
...................................................ACAGGUGAAUGUUGUGUGAU....................... len:20 al:31
...................................................ACAGGUGAAcGUUGUGUGAU....................... len:20 al:1
...................................................ACAGGUGAAUGUUGUGUGAcCGC.................... len:23 al:1
...................................................ACAGGUGAAUGUUGUGUGAUC...................... len:21 al:29
....................................................CAGGUGAAUGUUGUGUGAU....................... len:19 al:2
....................................................CAGGUGAAUGUUGUGUGAUC...................... len:20 al:3
....................................................CAGGUGAAUGUUGUGUGAUu...................... len:20 al:2
.....................................................AGGUGAAUGUUGUGUGAUC...................... len:19 al:1