Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content POR-71-TP2_S9_R1_001 POR-71-TP2_S9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 239166304.0 36.1 Gbp 0.0 151.0 34.0 75.08385730926945 151.0 151 pass pass warn pass fail fail pass pass pass warn fail POR-71-TP2_S9_R2_001 POR-71-TP2_S9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 239166304.0 36.1 Gbp 0.0 151.0 34.0 77.23140336863096 151.0 151 pass pass fail pass fail fail pass pass pass warn fail POR-73-TP2_S7_R1_001 POR-73-TP2_S7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 102689899.0 15.5 Gbp 0.0 151.0 26.0 28.992859209543177 151.0 151 pass pass warn pass fail warn pass pass fail pass fail POR-73-TP2_S7_R2_001 POR-73-TP2_S7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 102689899.0 15.5 Gbp 0.0 151.0 27.0 33.21921119928472 151.0 151 pass pass fail pass fail fail pass pass fail fail fail POR-76-TP2_S6_R1_001 POR-76-TP2_S6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 177234842.0 26.7 Gbp 0.0 151.0 38.0 66.73231448650984 151.0 151 pass pass warn pass fail fail pass pass warn warn fail POR-76-TP2_S6_R2_001 POR-76-TP2_S6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 177234842.0 26.7 Gbp 0.0 151.0 37.0 71.25378019286129 151.0 151 pass pass fail pass fail fail pass pass pass warn fail POR-79-TP2_S10_R1_001 POR-79-TP2_S10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 270598856.0 40.8 Gbp 0.0 151.0 33.0 71.4820356219051 151.0 151 pass pass warn pass fail fail pass pass pass warn fail POR-79-TP2_S10_R2_001 POR-79-TP2_S10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 270598856.0 40.8 Gbp 0.0 151.0 33.0 74.09619154372619 151.0 151 pass pass fail pass fail fail pass pass pass warn fail POR-82-TP2_S8_R1_001 POR-82-TP2_S8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 272397195.0 41.1 Gbp 0.0 151.0 40.0 56.609388457442144 151.0 151 pass pass warn pass fail fail pass pass warn warn fail POR-82-TP2_S8_R2_001 POR-82-TP2_S8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 272397195.0 41.1 Gbp 0.0 151.0 38.0 63.45370338119631 151.0 151 pass pass fail pass fail fail pass pass warn warn fail