Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/output/11-Apul-sRNA-ShortStack-pulchra_genome/ShortStack_out/merged_alignments.bam
Location: ptg000009l:616579-616673 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/output/11-Apul-sRNA-ShortStack-pulchra_genome/ShortStack_out/strucVis/Cluster_5900.ps.pdf
Locus Name: Cluster_5900
UGAAAAUUGGCCAUAGUCACAUUUCACUAGAUAAGCGCUAACUGUUAUUGUUCUGCGUUAUCGGUGAAAUUGUAACUGUUGCCUUCUAUUGCUUU
........(((.(((((.((((((((((.(((((.(((.(((.......)))..))))))))))))))).))).))))).)))............ (-28.20)
.GAAAAUUGGCCAUAGUCACc.......................................................................... len:20 al:2
...................CAUUUCACUAGAUAAGCGCUAACU.................................................... len:24 al:2
...................CAUUUCACUAGAUAAGCGuUAACU.................................................... len:24 al:1
....................AUUUCACUAGAUAAGCaCUAAC..................................................... len:22 al:7
....................uUUUCACUAGAUAAGCGC......................................................... len:18 al:2
....................AUUUCACUAGAUAgGCGCUAACU.................................................... len:23 al:2
....................AUUUCACUAGAUAAGCGCUAACg.................................................... len:23 al:11
....................AUUUCACUAGAUAgGCGCU........................................................ len:19 al:1
....................AUUUCACUAGgUAAGCGCUAAC..................................................... len:22 al:11
....................AUUUCACUAGAcAAGCGCU........................................................ len:19 al:1
....................AUUUCACUAGAUAAGCGCc........................................................ len:19 al:15
....................AUUUCgCUAGAUAAGCGCUA....................................................... len:20 al:1
....................AUUUCACUAGAUAAGCGCUAACU.................................................... len:23 al:238
....................AUUUCAgUAGAUAAGCGCUAAC..................................................... len:22 al:1
....................AUUUCACUAGAUAAGCaCU........................................................ len:19 al:1
....................AUUUCACcAGAUAAGCGCUA....................................................... len:20 al:2
....................AUUUCcCUAGAUAAGCGCUA....................................................... len:20 al:1
....................AUUUCACUAGAUAAGCGCcAAC..................................................... len:22 al:8
....................AUUUCACUAGAUAAGCGCUAAg..................................................... len:22 al:1
....................cUUUCACUAGAUAAGCGCUAAC..................................................... len:22 al:6
....................AUUUCcCUAGAUAAGCGCUAAC..................................................... len:22 al:1
....................AUUgCACUAGAUAAGCGCUAAC..................................................... len:22 al:1
....................AUUUCACcAGAUAAGCGCUAACU.................................................... len:23 al:2
....................AUUUCACUAGAUAAGCGCUAgC..................................................... len:22 al:24
....................AUUUuACUAGAUAAGCGCUAACU.................................................... len:23 al:1
....................gUUUCACUAGAUAAGCGCUAAC..................................................... len:22 al:52
....................AUUUCACUAGAUAAGCGCUAAuU.................................................... len:23 al:1
....................AUUUCACUAGAUAAGCGCU........................................................ len:19 al:109
....................AUUUCgCUAGAUAAGCGCUAACU.................................................... len:23 al:1
....................uUUUCACUAGAUAAGCGCUAACU.................................................... len:23 al:1
....................AUUUCACUAGAUAAGCGCUAACUu................................................... len:24 al:1
....................AUUUCACUAGAUAAGCGCg........................................................ len:19 al:4
....................AUcUCACUAGAUAAGCGCUAAC..................................................... len:22 al:10
....................AUUUCACUAGAUAAGCGCgA....................................................... len:20 al:2
....................AUUUCACUAGAUAAGCGCgAAC..................................................... len:22 al:5
....................AUUUCACUAGAUAAGCGCUu....................................................... len:20 al:6
....................AUUUCACUAGAUAAGCGuU........................................................ len:19 al:6
....................AUUUCACUAGAUAAGCGCUAACUa................................................... len:24 al:2
....................AUUUCACUAGAUAAGCGCUuA...................................................... len:21 al:1
....................AUUUCACUAaAUAAGCGCUAAC..................................................... len:22 al:2
....................AUUUCACUAGAUAAGCGCUAuC..................................................... len:22 al:3
....................AUUaCACUAGAUAAGCGCUAAC..................................................... len:22 al:1
....................AUUUCACUAGAUAgGCGCUA....................................................... len:20 al:1
....................AUUUCACUAGAUAAGaGCUAAC..................................................... len:22 al:1
....................AUUUCACUAGAUAAGCGCUAu...................................................... len:21 al:1
....................AUUUCACUAGgUAAGCGCU........................................................ len:19 al:1
....................AUUUCACUgGAUAAGCGCUAAC..................................................... len:22 al:8
....................AUUUCACUAGAUAAGCGCUAAu..................................................... len:22 al:303
....................AUUUCACUAGAUAAGCGaUA....................................................... len:20 al:1
....................AUUUCACUAGAUAgGCGCUAAC..................................................... len:22 al:24
....................AUUUCACUAGAUAAGCGCUAACc.................................................... len:23 al:43
....................AUUUCACUAGAUAAGCGCaAAC..................................................... len:22 al:3
....................AUUUCACUAGAUAAGCuCUAAC..................................................... len:22 al:3
....................AUUUCACUAGAUAAGCGCUg....................................................... len:20 al:1
....................AUUUCACUAGAUAAGCGCUAACUuU.................................................. len:25 al:2
....................AUUcCACUAGAUAAGCGCUAAC..................................................... len:22 al:17
....................AUUUCAuUAGAUAAGCGCUAAC..................................................... len:22 al:2
....................AUUUCACUAGAUAcGCGCUAA...................................................... len:21 al:1
....................uUUUCACUAGAUAAGCGCU........................................................ len:19 al:1
....................AUUUCACUAGAUAAGCGu......................................................... len:18 al:3
....................AUUUCACUAGAUAAuCGCUAAC..................................................... len:22 al:1
....................AUUUCACUAGAUAAGCcCUAAC..................................................... len:22 al:2
....................AUUUCACUAGAUAAGCGCUA....................................................... len:20 al:186
....................AUUUCACUAGAcAAGCGCUAAC..................................................... len:22 al:6
....................AUUUCACcAGAUAAGCGCUAAC..................................................... len:22 al:9
....................AUUUuACUAGAUAAGCGCUAAC..................................................... len:22 al:2
....................AaUUCACUAGAUAAGCGCUAACU.................................................... len:23 al:1
....................AcUUCACUAGAUAAGCGCUAAC..................................................... len:22 al:25
....................AUcUCACUAGAUAAGCGCU........................................................ len:19 al:1
....................AUUUCACUAGAUAAGCGCUuAC..................................................... len:22 al:3
....................gUUUCACUAGAUAAGCGCU........................................................ len:19 al:3
....................AUUUCACUAGAUAAGCGCUgAC..................................................... len:22 al:9
....................AUUUCACUAGAUAAGCGCUAACa.................................................... len:23 al:156
....................AUUUCACUAGAUAAGCGCa........................................................ len:19 al:17
....................AUUUCACUAuAUAAGCGCUA....................................................... len:20 al:1
....................AUUUCACUAGAUAAGCGCUAAC..................................................... len:22 al:3624
....................AUUUCACUAGgUAAGCGCUAACU.................................................... len:23 al:1
....................AUUUCACUAGAUcAGCGCUAAC..................................................... len:22 al:4
....................AUUUCACUAGAUuAGCGCUAAC..................................................... len:22 al:2
....................gUUUCACUAGAUAAGCGCUAACU.................................................... len:23 al:1
....................AUUUCACUAGAUAAGCGCUAAa..................................................... len:22 al:37
....................cUUUCACUAGAUAAGCGCUAACU.................................................... len:23 al:2
....................AUUUCACUAGAUAcGCGCUA....................................................... len:20 al:1
....................uUUUCACUAGAUAAGCGCUA....................................................... len:20 al:1
....................AUUUCACUAuAUAAGCGCUAAC..................................................... len:22 al:1
....................AcUUCACUAGAUAAGCGCUAACU.................................................... len:23 al:1
....................AUUUCACUAGAUAAGCGCUAA...................................................... len:21 al:36
....................uUUUCACUAGAUAAGCGCUAAC..................................................... len:22 al:17
....................AUcUCACUAGAUAAGCGCUAACU.................................................... len:23 al:1
....................AUUUCACUAGAUAAGCGCcA....................................................... len:20 al:16
....................AUUUCACUAGAUAAGCGCUAACUGU.................................................. len:25 al:1
....................AUUUCgCUAGAUAAGCGCUAAC..................................................... len:22 al:6
....................AUUcCACUAGAUAAGCGCUAACU.................................................... len:23 al:2
....................AUUcCACUAGAUAAGCGCUA....................................................... len:20 al:1
....................gUUUCACUAGAUAAGCGCUA....................................................... len:20 al:3
....................AcUUCACUAGAUAAGCGCU........................................................ len:19 al:1
....................AUUUCACUAGAUAAGCGC......................................................... len:18 al:7
....................AUUUCACUAGAUAAGCGCUAACUGUU................................................. len:26 al:1
....................AUUUCACUAGAUAAGuGCUAAC..................................................... len:22 al:3
....................AUUUCACUAGAUAAGCGCUAc...................................................... len:21 al:1
....................AgUUCACUAGAUAAGCGCUAACU.................................................... len:23 al:2
....................AUUUCACUAGAUAAGCuCU........................................................ len:19 al:1
....................AUUUCACUAGAUAAGCcCU........................................................ len:19 al:2
.....................UUUCACUAGAUAAGCGCUA....................................................... len:19 al:1
.....................UUUCACUAGAUAAGCGCUuACU.................................................... len:22 al:1
.....................UUUCACUAGAUAAGCGCUAAC..................................................... len:21 al:10
.....................aUUCACUAGAUAAGCGCUAAC..................................................... len:21 al:2
.....................UUUCACUAGAUAAGCGCUAACa.................................................... len:22 al:4
.....................UUUCACUAGAUAAGCGCcA....................................................... len:19 al:1
......................UUCACUAGAUAAGCGCUAAu..................................................... len:20 al:2
......................UUCACUAGAUAAGCGCUAACUGU.................................................. len:23 al:2
......................UUCACUAGAUAAGCGCUAACa.................................................... len:21 al:1
........................CACUAGAUAAGCGCUAAC..................................................... len:18 al:1
..........................................UGUUAUUGUUCUGCGUUgUCGGUGAAAUUGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUG....................... len:30 al:37
..........................................UGUUAUUGUUCUGCGUUAUCGGUGgAAUUGU...................... len:31 al:5
..........................................UGUUAUUGUUCUGCGUUAUCGGUGgAAUUG....................... len:30 al:1
..........................................UGUUAUUGcUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:7
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAU......................... len:28 al:1
..........................................UGUUAUUGUcCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:2
..........................................UGUUAUUGUaCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGuAAUUGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUcGU...................... len:31 al:1
..........................................UGUUAUcGUUCUGCGUUAUCGGUGAAAUUG....................... len:30 al:1
..........................................UaUUAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:2
..........................................UGUUAUUGUUCcGCGUUAUCGGUGAAAUUGU...................... len:31 al:6
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUGc...................... len:31 al:189
..........................................UGUUAUUGUUCUGCGUUAUCGGUGA............................ len:25 al:1
..........................................UGUcAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUaU...................... len:31 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUc........................ len:29 al:1
..........................................UGUUAUcGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:5
..........................................aGUUAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:3
..........................................UGUUAUUGUUCUGCGUUAUCGGcGAAAUUGU...................... len:31 al:5
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAgUUGU...................... len:31 al:5
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUaGU...................... len:31 al:1
..........................................UGUUAUUGUUuUGCGUUAUCGGUGAAAUUGU...................... len:31 al:1
..........................................cGUUAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:4
..........................................UGUUAUUGUUCUGCGUUAUCaGUGAAAUUGU...................... len:31 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:971
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAuUUGU...................... len:31 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGGUaAAAUUGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUGg...................... len:31 al:6
..........................................UGUUAUUGUUCUGCGUUAUCGGcGA............................ len:25 al:1
..........................................UGUUgUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:6
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAcUGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUaAAAU......................... len:28 al:2
..........................................UGUUAUUGUUCUGuGUUAUCGGUGAAAUUGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUG............................. len:24 al:5
..........................................UGcUAUUGUUCUGCGUUAUCGGUGAAAU......................... len:28 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUGa...................... len:31 al:23
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAgUUG....................... len:30 al:1
..........................................UuUUAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:1
..........................................UGaUAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAc.................................. len:19 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUcU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGgGAAAUUG....................... len:30 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGaUGAAAUUGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUU........................ len:29 al:5
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUa....................... len:30 al:6
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAgAUUGU...................... len:31 al:5
..........................................UGcUAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:4
..........................................UGUUAUUGUUCUGCGUUAUCGGUa............................. len:24 al:1
..........................................cGUUAUUGUUCUGCGUUAUCGGUGAAAU......................... len:28 al:1
..........................................UGUUAcUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAuAUUG....................... len:30 al:1
..........................................UGUUAUUGUUCUGCGUUAUC................................. len:20 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGGUGgAAUU........................ len:29 al:2
..........................................UGUUAUUGUUCUGCGcUAUCGGUGAAAUUGU...................... len:31 al:4
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUgGU...................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUcG....................... len:30 al:1
...........................................GUUAUUGUUCUGCGUUAcCGGUGAAAUUGU...................... len:30 al:3
...........................................GUUAUUGUUCUGCGUUAUCGGUGAAAUUGc...................... len:30 al:1
...........................................GUUAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:30 al:8
.............................................aAUUGUUCUGCGUUAUCGGUGAAAUUGU...................... len:28 al:2
.................................................GUUCUGCGUUAUCGGUGAAAUUGc...................... len:24 al:1
.................................................GUUCUGCGUUAUCGGUGA............................ len:18 al:1
.................................................GUUCUGCGUUAUCGGUGAAAUUGU...................... len:24 al:2
..................................................UUCUGCGUUAUCGGUGAAAUUGc...................... len:23 al:1
..................................................cUCUGCGUUAUCGGUGAAAUU........................ len:21 al:1
..................................................UUCUGCGUUAUCGGUGAAAUUa....................... len:22 al:2
..................................................UUCUGCGcUAUCGGUGAAAUUGU...................... len:23 al:1
..................................................cUCUGCGUUAUCGGUGAAAUUGU...................... len:23 al:14
..................................................UaCUGCGUUAUCGGUGAAAUUGU...................... len:23 al:1
..................................................UUCUGCGUUAUCGGUGAAAUUG....................... len:22 al:1
..................................................UUCUGCGUUAUCGGUGAAAUUGUu..................... len:24 al:1
..................................................UUCUGCGUUAUCGGUGAAAUUGU...................... len:23 al:16
...................................................UCUcCGUUAUCGGUGAAAUUG....................... len:21 al:1
...................................................UCUGCGUUAUCGuUGAAAUUGU...................... len:22 al:3
...................................................UCUGCGUUAUCGGUGAAAUUu....................... len:21 al:29
...................................................UCUGCGUUAUCGGUGAAgUUGU...................... len:22 al:188
...................................................UCUGCGUUAUCGGUGAAAUcGUA..................... len:23 al:1
...................................................UCUGCGUUAUCGGUGAAAUUGUuA.................... len:24 al:22
...................................................UCUGCGUUAUCGGUGAgAU......................... len:19 al:3
...................................................UCUGCGUUAUCGGUGAAgUUGUA..................... len:23 al:7
...................................................UCUGCGUUAUCGaUGAAAUUGUA..................... len:23 al:2
...................................................UCUGCGUUcUCGGUGAAAUUGU...................... len:22 al:3
...................................................UCUGCGUUAUCGGUGAAAcUGU...................... len:22 al:133
...................................................UCUGCGUUAUCGGUGAAgUU........................ len:20 al:4
...................................................UCUGCGcUAUCGGUGAAAUUGU...................... len:22 al:132
...................................................UCUGCGUUAUCGGUGAAAUU........................ len:20 al:955
...................................................UCUGCGcUAUCGGUGAAAUUG....................... len:21 al:7
...................................................aCUGCGUUAUCGGUGAAAU......................... len:19 al:4
...................................................UCUGCGUUAUCGGUGAAAU......................... len:19 al:555
...................................................UCUGCGUUAUCGGUGAAAUcGU...................... len:22 al:102
...................................................UCUGCGUUAUaGGUGAAAUUG....................... len:21 al:2
...................................................UCUGCGUUAUCGGUGAAuU......................... len:19 al:1
...................................................UCUGCGUUAUCGGcGAAAUUGU...................... len:22 al:176
...................................................UCUGCGUUAUCGGUGAAAUc........................ len:20 al:122
...................................................UCUGCGUaAUCGGUGAAAUUGUAA.................... len:24 al:1
...................................................UCUGCGUUAUCGGUGAAAUUaU...................... len:22 al:48
...................................................UCUGCGUaAUCGGUGAAAUUGU...................... len:22 al:4
...................................................UCUGCGUUAUCaGUGAAAUUGU...................... len:22 al:86
...................................................UCcGCGUUAUCGGUGAAAU......................... len:19 al:1
...................................................UCUGCGUUgUCGGUGAAAU......................... len:19 al:2
...................................................UCUGCGUUAUCGGUGAAAUUGU...................... len:22 al:52366
...................................................UCUGCGUUAUCGGUGAAAUUa....................... len:21 al:243
...................................................UCUGCGUUAUCGGUGAcAUUGU...................... len:22 al:5
...................................................cCUGCGUUAUCGGUGAAAUUGU...................... len:22 al:238
...................................................UCgGCGUUAUCGGUGAAAUUG....................... len:21 al:1
...................................................UCUGuGUUAUCGGUGAAAUU........................ len:20 al:3
...................................................gCUGCGUUAUCGGUGAAAUUGU...................... len:22 al:27
...................................................UCUGCGUUAaCGGUGAAAUUGU...................... len:22 al:5
...................................................UCUGCGUUAUCGGUGAAAcUGUA..................... len:23 al:2
...................................................UCUGCGUUAUaGGUGAAAU......................... len:19 al:1
...................................................UCcGCGUUAUCGGUGAAAUUGU...................... len:22 al:239
...................................................UCUGCGUUAUCGGUGAAAUUGUAuC................... len:25 al:1
...................................................UCUGCGUUAUCGGUGcAAUU........................ len:20 al:1
...................................................UCUGuGUUAUCGGUGAAAUUG....................... len:21 al:2
...................................................UaUGCGUUAUCGGUGAAAUUG....................... len:21 al:2
...................................................UuUGCGUUAUCGGUGAAAUUGU...................... len:22 al:174
...................................................UCUGCGUUAUCGGUaAAAUUGUA..................... len:23 al:1
...................................................UCUGCGUUAUCGGUGAuAUUG....................... len:21 al:1
...................................................UgUGCGUUAUCGGUGAAAUUGU...................... len:22 al:10
...................................................UCUGCGUUAUCGGUGcAAUUGU...................... len:22 al:3
...................................................UCUGCGUUAUCGGUGAAAUUaUA..................... len:23 al:4
...................................................UCUGCGUUAUCGGUGAAAc......................... len:19 al:57
...................................................aCUGCGUUAUCGGUGAAAUU........................ len:20 al:1
...................................................UCcGCGUUAUCGGUGAAAUU........................ len:20 al:9
...................................................UCUGCGUUAUCGGUaAAAUUG....................... len:21 al:2
...................................................UCUGCGUUAUuGGUGAAAU......................... len:19 al:1
...................................................UCUGCGUUAUCGGUGgAAUUG....................... len:21 al:6
...................................................UCUGCGUUAUCGGUGAAu.......................... len:18 al:7
...................................................UCUGCGUUAUCGGUGAgAUUG....................... len:21 al:7
...................................................UCUGCGUUAUuGGUGAAAUUGUA..................... len:23 al:2
...................................................UCUGCGUUAUCGGUGAAAUUGg...................... len:22 al:782
...................................................UCUGCGUUAUCGcUGAAAUUGU...................... len:22 al:2
...................................................UCUGCGUUAcCGGUGAAA.......................... len:18 al:1
...................................................UCUGCGUUAUCGGUGAAAUgG....................... len:21 al:5
...................................................UCUGCGaUAUCGGUGAAAUUGU...................... len:22 al:13
...................................................UCUGCGUUAUCGGUGAAAUUGgA..................... len:23 al:1
...................................................UCgGCGUUAUCGGUGAAAUUGU...................... len:22 al:6
...................................................UCUGCGUUAUCGGUGAAAUcG....................... len:21 al:11
...................................................UCUGCGUUAUCGGUGAAAUUuUA..................... len:23 al:1
...................................................UCUGCGUUAUCGGUaAAAU......................... len:19 al:1
...................................................UCUGCGUUAUCGGcGAAAU......................... len:19 al:6
...................................................UCaGCGUUAUCGGUGAAAUU........................ len:20 al:1
...................................................UCUGCGUUAUCGGUGAAA.......................... len:18 al:57
...................................................UCUGCGUUAUCGGUGAAAUUGUc..................... len:23 al:137
...................................................UCUGCGUUAUCGGUGAAAUaGU...................... len:22 al:12
...................................................UCUGCGUUAcCGGUGAAAUUG....................... len:21 al:1
...................................................UCUGCGcUAUCGGUGAAAU......................... len:19 al:1
...................................................UCUGCGUUAUCGGUGAgAUUGU...................... len:22 al:271
...................................................UuUGCGUUAUCGGUGAAAUU........................ len:20 al:7
...................................................cCUGCGUUAUCGGUGAAAU......................... len:19 al:2
...................................................UaUGCGUUAUCGGUGAAAUU........................ len:20 al:1
...................................................UCUGCGUUAUCGGUGAAAUUGUAAu................... len:25 al:2
...................................................UCUGCGUUAUCGGUGgAAUUGUA..................... len:23 al:5
...................................................UCUGCGUUAUuGGUGAAAUUGU...................... len:22 al:44
...................................................UCUGCGUUAUCGGUGgAAUUGU...................... len:22 al:242
...................................................UCUGCGUUAUCGGUGAAAgUGU...................... len:22 al:18
...................................................UCaGCGUUAUCGGUGAAAUUGU...................... len:22 al:36
...................................................UCUGCGUUAUCGGUGAAAUUGUAc.................... len:24 al:7
...................................................UCUGCGUUAUCGGUGAAuUUG....................... len:21 al:2
...................................................UCUGCGUUAUCGGUGAAcUUGU...................... len:22 al:12
...................................................UCUGCGUUAUCGGUGAAAUg........................ len:20 al:1
...................................................UCUGCcUUAUCGGUGAAAUUGU...................... len:22 al:2
...................................................aCUGCGUUAUCGGUGAAAUUG....................... len:21 al:2
...................................................UCUGCGUcAUCGGUGAAAU......................... len:19 al:2
...................................................UCUGCGUcAUCGGUGAAAUU........................ len:20 al:1
...................................................UCUGCGUUAUCGGUGAAAUUGc...................... len:22 al:10083
...................................................UCUGCGUUAUCGGUGAAAUUc....................... len:21 al:17
...................................................UCUGCGUUAUCuGUGAAAUUGU...................... len:22 al:10
...................................................UCUGCGUUAUCGGUGAAAaU........................ len:20 al:2
...................................................UCUGCGUUAUCGGUGAAAUUGUAAuU.................. len:26 al:1
...................................................UCUGCGUUAUgGGUGAAAUUGU...................... len:22 al:5
...................................................UCUGCGUUAUCGGUaAAAUUGU...................... len:22 al:22
...................................................UCUGCGcUAUCGGUGAAAUU........................ len:20 al:4
...................................................UCUGCGUUAUCGGUGAAAUUGa...................... len:22 al:1270
...................................................UCUGCGUUAcCGGUGAAAUUGUA..................... len:23 al:2
...................................................UCUGCGUUgUCGGUGAAAUUGUA..................... len:23 al:1
...................................................UuUGCGUUAUCGGUGAAAU......................... len:19 al:2
...................................................UCUGCGUUgUCGGUGAAAUU........................ len:20 al:1
...................................................UCUGCGUUAUCGGcGAAAUU........................ len:20 al:5
...................................................UCUaCGUUAUCGGUGAAAUUGUA..................... len:23 al:3
...................................................UCcGCGUUAUCGGUGAAAUUGUA..................... len:23 al:2
...................................................UCUGCGUUAUCGGUGAuAUU........................ len:20 al:1
...................................................UCUGCGUUAUCGGUGAgAUUGUA..................... len:23 al:1
...................................................UCUGCGUUAUCGGcGAAAUUG....................... len:21 al:7
...................................................UCUGCGUUAUCGGUGAAAUaG....................... len:21 al:2
...................................................UuUGCGUUAUCGGUGAAAUUG....................... len:21 al:4
...................................................UCUGCGUUAUCGGUGAAgUUG....................... len:21 al:7
...................................................UCUGCGUUAUCGGUcAAAUUGU...................... len:22 al:1
...................................................UCUGCGUUAUCGGUGAAAUgGU...................... len:22 al:44
...................................................UCUGCGUUAUCGGUGAAuUUGU...................... len:22 al:19
...................................................UCUGCGUUAUCGaUGAAAUU........................ len:20 al:2
...................................................cCUGCGUUAUCGGUGAAAUUG....................... len:21 al:5
...................................................UCUGCGgUAUCGGUGAAAUUGU...................... len:22 al:11
...................................................aCUGCGUUAUCGGUGAAAUUGUA..................... len:23 al:1
...................................................UCUGCGUUAUCGGUGAgAUU........................ len:20 al:5
...................................................UCUGCGUUAUCGGgGAAAUUG....................... len:21 al:3
...................................................UCUGCGUUAUCGGUGAAAa......................... len:19 al:24
...................................................UCUGCGUUAUCGGUGAAAcUG....................... len:21 al:5
...................................................UCUGCGUUAUCGaUGAAAUUGU...................... len:22 al:46
...................................................cCUGCGUUAUCGGUGAAAUUGUA..................... len:23 al:1
...................................................gCUGCGUUAUCGGUGAAAUUG....................... len:21 al:2
...................................................UCUGCGUUAUCcGUGAAAUUGU...................... len:22 al:2
...................................................UCUcCGUUAUCGGUGAAAUUGU...................... len:22 al:2
...................................................UCUGuGUUAUCGGUGAAAUUGU...................... len:22 al:76
...................................................UCUGCGUcAUCGGUGAAAUUGU...................... len:22 al:78
...................................................cCUGCGUUAUCGGUGAAAUU........................ len:20 al:4
...................................................UCUGCGUUAUCGGaGAAAUUGU...................... len:22 al:9
...................................................UCUGCGUUAgCGGUGAAAUUGU...................... len:22 al:2
...................................................UCUGCGUUuUCGGUGAAAUUGU...................... len:22 al:1
...................................................UCUGCGUUAUCGGUGAAgU......................... len:19 al:14
...................................................UCUGCGUUAUCGaUGAAAUUG....................... len:21 al:2
...................................................UCUGCcUUAUCGGUGAAAUUG....................... len:21 al:1
...................................................UCUGCGUUAUCGGgGAAAUUGU...................... len:22 al:8
...................................................UCUGCGUUAUCGGUuAAAUU........................ len:20 al:1
...................................................UCUGCGUUAcCGGUGAAAU......................... len:19 al:1
...................................................UCUGCGUUAUCGGUGAuAUUGU...................... len:22 al:12
...................................................UCUGgGUUAUCGGUGAAAUUGU...................... len:22 al:2
...................................................aCUGCGUUAUCGGUGAAAUUGU...................... len:22 al:98
...................................................UCUGCGUUAUCGGUuAAAUUGU...................... len:22 al:3
...................................................UCUGCGUUgUCGGUGAAAUUGU...................... len:22 al:84
...................................................UCUGCGUUAUCGGUGAAAUUcU...................... len:22 al:46
...................................................UCUGCGUUAUCGGUGAAAaUGU...................... len:22 al:14
...................................................UgUGCGUUAUCGGUGAAAUUGUA..................... len:23 al:1
...................................................UCUGCGUUAUuGGUGAAAUUG....................... len:21 al:6
...................................................UCUGCGUUAUCGGUGAAAUUGUgA.................... len:24 al:2
...................................................UCUGCGUUAUCGGUGAAAUUGcA..................... len:23 al:42
...................................................UCUGCGUUAUCGGgGAAAUU........................ len:20 al:1
...................................................UCUGCGUUAUCGGUGAAAUUG....................... len:21 al:1944
...................................................UCUGCGUUAUCaGUGAAAUU........................ len:20 al:1
...................................................UCUGCGUUAcCGGUGAAAUUGU...................... len:22 al:37
...................................................UCUGCGUUAUCGGUGAAAg......................... len:19 al:30
...................................................UCUGCGUUAUCGGUGAAAUUGUAA.................... len:24 al:3
...................................................UCUGCGUUAUCGGUGAAAUUGUu..................... len:23 al:830
...................................................UCUGCGUUAUaGGUGAAAUUGU...................... len:22 al:7
...................................................UCUaCGUUAUCGGUGAAAUUGU...................... len:22 al:44
...................................................UCUGCuUUAUCGGUGAAAUUGU...................... len:22 al:7
...................................................UCUGCGUUAUCGGUG............................. len:15 al:7
...................................................UCUGCGUUAUCGGUGgAAU......................... len:19 al:4
...................................................UCUGaGUUAUCGGUGAAAUUGU...................... len:22 al:11
...................................................UCUGCGUUAUCGGcGAAAUUGUA..................... len:23 al:1
...................................................UCUGCGUUAUgGGUGAAAU......................... len:19 al:1
...................................................UCcGCGUUAUCGGUGAAAUUG....................... len:21 al:9
...................................................UCUuCGUUAUCGGUGAAAUUGU...................... len:22 al:13
...................................................UCUGCGUUAUCGGUGAAAcU........................ len:20 al:8
...................................................UCUGCGUUAUCGGUGAuA.......................... len:18 al:1
...................................................UCUGCGUUAUCGGUGuAAUUGU...................... len:22 al:28
...................................................UCUGCGUUAUuGGUGAAAUU........................ len:20 al:2
...................................................UCUGCGUUAUCGGUGAAAUa........................ len:20 al:9
...................................................UCUGCGUUAUCGGUGAAAUUGUg..................... len:23 al:24
...................................................UCUGCGUUAUCGGUGAAAgU........................ len:20 al:1
...................................................UCUGCGUUAUCGGUGAAAUUGUA..................... len:23 al:704
...................................................UCUGCGUUAUCGGUGAAAUUGUAu.................... len:24 al:43
...................................................UCUGCGUUAUCGGUGAAAUUuU...................... len:22 al:26
...................................................UCUGCuUUAUCGGUGAAAU......................... len:19 al:1
...................................................UCUGCGUUAUCaGUGAAAU......................... len:19 al:2
...................................................UCUGCGUcAUCGGUGAAAUUG....................... len:21 al:2
...................................................UCUGCGUUAUCGGUGgAAUU........................ len:20 al:1
...................................................UCUGCGUUgUCGGUGAAAUUG....................... len:21 al:10
...................................................UCUGuGUUAUCGGUGAAAUUGUA..................... len:23 al:2
...................................................UCUGCGUUAUCGGUGAuAU......................... len:19 al:2
...................................................UaUGCGUUAUCGGUGAAAUUGU...................... len:22 al:21
....................................................CUGCGUUAUCGGUGAAAUU........................ len:19 al:2
....................................................CUGCGUUAUCGGUGAAAUUu....................... len:20 al:2
....................................................CUGCGUUAUCGGUGAAAU......................... len:18 al:2
....................................................CUGCGUUAUCGGUGAAAUUG....................... len:20 al:5
....................................................uUGCGUUAUCGGUGAAAUUGU...................... len:21 al:3
....................................................CUGCGUUAUCGGUGAAAUUGU...................... len:21 al:44
....................................................CUGCGUUAUCGGUGAAAUUGUuA.................... len:23 al:1
....................................................CUGCGUUAUCGGUGAAAUUGc...................... len:21 al:7
.....................................................UGCGUUAUCGGUcAAAUUGU...................... len:20 al:1
.....................................................UGCGUUAUCGGUGAAAUUa....................... len:19 al:1
.....................................................UGCGUUAUCGGUGAAAUc........................ len:18 al:1
.....................................................UGCGUUAUCGGUGgAAUUGU...................... len:20 al:1
.....................................................UGCGUUAUCGGUGAAAUUGUA..................... len:21 al:4
.....................................................UGCGUUAUCGGUGAAAUUGc...................... len:20 al:12
.....................................................UGCGUUAUCGGUGAAAUUGU...................... len:20 al:58
.....................................................UGCGUUAUCGGUGAAAUUGUc..................... len:21 al:1
.....................................................UGCGUUAUCGGUGAAAUUG....................... len:19 al:3
.....................................................UGCGUUAUCGGUGAAAUU........................ len:18 al:3
......................................................GCGUUAUCGGUGAAAUUGc...................... len:19 al:1
......................................................GCGUUAUCGGUGAAAUUGU...................... len:19 al:8
.......................................................CGUUAUCGGUGAAAUUGU...................... len:18 al:3
.......................................................CGUUAUCGGUGAAAUUGc...................... len:18 al:1
........................................................GUUAUCGGUGAAAUUGU...................... len:17 al:2
........................................................GUUAUCGGUGAAAUUGUu..................... len:18 al:1
.........................................................................AACUGUUGCCUcCUAUUGCUU. len:21 al:2
.........................................................................AACUGUUGCCUcCUAUUGC... len:19 al:1
.........................................................................AACUGUUGCCUcCUAUUGCUUU len:22 al:4
.........................................................................AACUGUUGCCUcCUAUUGCU.. len:20 al:3
..........................................................................ACUGUUGCCUcCUAUUGCUUU len:21 al:1