Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/output/11-Apul-sRNA-ShortStack-pulchra_genome/ShortStack_out/merged_alignments.bam
Location: ptg000008l:10754767-10754862 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/output/11-Apul-sRNA-ShortStack-pulchra_genome/ShortStack_out/strucVis/Cluster_5012.ps.pdf
Locus Name: Cluster_5012
CUAACUAACAUCUUCUGUCUCUGCUACUUGGACUUUUUUCACGUUUAUCGAUGAAAGAAGUACAAGUGGUAGGGAUUGGGCUGUUAACCACAUCAA
.....(((((.(((..((((((((((((((.((((((((((((.....)).)))))))))).)))))))))))))).))).))))).......... (-37.70)
..................CUCUGCUACUUGGACUUUUUUCA....................................................... len:23 al:3
...................UCUGCUACUUGGACUUUUUUCACu..................................................... len:24 al:1
...................UCUaCUACUUGGACUUUUUUCA....................................................... len:22 al:5
...................UCUGCUACUUGGACUUUUUUCAC...................................................... len:23 al:6
...................UCUGCUACaUGGACUUUUUUCA....................................................... len:22 al:1
...................UCUGuUACUUGGACUUUUUUCAC...................................................... len:23 al:1
...................UCUGCUACUcGGACUUUUUUCA....................................................... len:22 al:6
...................cCUGCUACUUGGACUUUUUUCA....................................................... len:22 al:22
...................UCUGCUACUaGGACUUUUUUCA....................................................... len:22 al:3
...................UCUGCUACUUGGuCUUUUUUC........................................................ len:21 al:2
...................UCUGCUAuUUGGACUUUUUUCA....................................................... len:22 al:1
...................UCUGCUACUUGGACUUUUUUu........................................................ len:21 al:22
...................UCUaCUACUUGGACUUUUUUC........................................................ len:21 al:2
...................UCUGCUACUUGGACcUUUUUC........................................................ len:21 al:3
...................UCUGCcACUUGGACUUUUUUCA....................................................... len:22 al:6
...................UCUGCUACUUGGACUUUUcUCA....................................................... len:22 al:4
...................UCUcCUACUUGGACUUUUUUCA....................................................... len:22 al:2
...................UCUGCUACUUGGACcUUUUUCA....................................................... len:22 al:21
...................UCUGCUACUUGGACUUUa........................................................... len:18 al:1
...................UCUGCUACUUGGAaUUUUUUCA....................................................... len:22 al:2
...................UCUGCUgCUUGGACUUUUUUC........................................................ len:21 al:1
...................UCUGCUACUUGGACUUUUUUCACa..................................................... len:24 al:1
...................UCcGCUACUUGGACUUUUUUCA....................................................... len:22 al:15
...................UCUGCUACUUGGACUUUgUUC........................................................ len:21 al:6
...................UCUGCUACUUGGACUUUUUUCAa...................................................... len:23 al:7
...................UCUGCUAaUUGGACUUUUUUCA....................................................... len:22 al:1
...................UCUGCUgCUUGGACUUUUUUCA....................................................... len:22 al:9
...................UCUGCUACUUGGACUUcUUUCA....................................................... len:22 al:11
...................gCUGCUACUUGGACUUUUUUCA....................................................... len:22 al:1
...................UCUGCUACUUGGACUUUUUUCu....................................................... len:22 al:47
...................UCUGCUACUUGGACUUUUUU......................................................... len:20 al:17
...................UuUGCUACUUGGACUUUUUUCA....................................................... len:22 al:5
...................UCUGCUACUUGGACUUUUUUuA....................................................... len:22 al:5
...................UCUGCUACUUGGACUUUUUcCA....................................................... len:22 al:47
...................UCUGCUACUUGGACUUUUUcC........................................................ len:21 al:2
...................aCUGCUACUUGGACUUUUUUC........................................................ len:21 al:1
...................UCUGuUACUUGGACUUUUUUCA....................................................... len:22 al:2
...................UCUGCUACUUGGACUUUUUUCg....................................................... len:22 al:56
...................UCUGCcACUUGGACUUUUUUC........................................................ len:21 al:1
...................UCUGCUACUUGGACUcUUUUCA....................................................... len:22 al:17
...................UCUGCUACUUGGACUUUUUUC........................................................ len:21 al:340
...................UCUGCaACUUGGACUUUUUUCA....................................................... len:22 al:2
...................UCUGCUACUUGGACaUUUUUCA....................................................... len:22 al:1
...................cCUGCUACUUGGACUUUU........................................................... len:18 al:1
...................UCUGCUACUUGGACUUUUUUCACcU.................................................... len:25 al:1
...................UCUGCUACUUGGgCUUUUUUC........................................................ len:21 al:1
...................UCaGCUACUUGGACUUUUUUCA....................................................... len:22 al:1
...................UCUGCUACUUaGACUUUUUUCA....................................................... len:22 al:2
...................UCUuCUACUUGGACUUUUUUCA....................................................... len:22 al:5
...................UCUGCUACUUGGACcUUUU.......................................................... len:19 al:1
...................UCUGCUACUUGGuCUUUUUUCA....................................................... len:22 al:2
...................UCUGCUACUUGGACUUUUc.......................................................... len:19 al:2
...................UCUGCUACUUGGAuUUUUUUC........................................................ len:21 al:1
...................UCUGCUACUUGGACUUUcUUCA....................................................... len:22 al:15
...................UCUGCUACUUGGcCUUUUUUCA....................................................... len:22 al:2
...................UCUGCUACUUGGACUUUUUc......................................................... len:20 al:3
...................UCUGCUACUUGaACUUUUUUCA....................................................... len:22 al:4
...................UCUGCUACUUGGACUUUUUUCA....................................................... len:22 al:3871
...................UCUGCUACUcGGACUUUUUUC........................................................ len:21 al:3
...................UCUGCUACUUGGACUUUUUa......................................................... len:20 al:2
...................UCUGCUACUUGGACUUUUUUaA....................................................... len:22 al:2
...................UCUGCUACUUGGgCUUUU........................................................... len:18 al:1
...................UCUGaUACUUGGACUUUUUUCA....................................................... len:22 al:1
...................UCUGCUACUUGGgCUUUUUUCA....................................................... len:22 al:14
...................UCcGCUACUUGGACUUUUUUC........................................................ len:21 al:3
...................cCUGCUACUUGGACUUUUUUC........................................................ len:21 al:4
...................aCUGCUACUUGGACUUUUUUCA....................................................... len:22 al:10
...................UCgGCUACUUGGACUUUUUUCA....................................................... len:22 al:1
...................UCUGCUACUUGuACUUUUUUCA....................................................... len:22 al:1
...................UCUGCUACUUGGACUUUUUUCAg...................................................... len:23 al:1
...................UCUGCUACUUGGACUcUUUUC........................................................ len:21 al:1
...................UCUGCUACUUGGACUcUUUU......................................................... len:20 al:1
...................UCUGCUACUUGGACUUUUUUCAu...................................................... len:23 al:25
...................UCUGCUACcUGGACUUUUUUCA....................................................... len:22 al:13
...................UCUGCUACUUGGACUUUgUUCA....................................................... len:22 al:1
...................UCUGCUACUUGGACUUUU........................................................... len:18 al:10
...................UCUGCUACUUGGAuUUUUUUCA....................................................... len:22 al:13
...................UCUGuUACUUGGACUUUUUUC........................................................ len:21 al:1
...................UCUGCUACUUGGACUUUUUUa........................................................ len:21 al:4
...................UCUGCUACUUGGACUUUUUUCc....................................................... len:22 al:2
...................UCUGCUACUUuGACUUUUUUCA....................................................... len:22 al:2
...................UgUGCUACUUGGACUUUUUUCA....................................................... len:22 al:2
...................UaUGCUACUUGGACUUUUUUCA....................................................... len:22 al:3
...................UCUGCUACUUGGACUUUUU.......................................................... len:19 al:26
....................CcGCUACUUGGACUUUUUUC........................................................ len:20 al:4
....................CUGCUcCUUGGACUUUUUUC........................................................ len:20 al:1
....................CUGCUACUUGGACUUUUUUCAC...................................................... len:22 al:13
....................CUGCUACUUGGACUUUUUUCu....................................................... len:21 al:92
....................CUGCUACUUGGACUUUUUUuA....................................................... len:21 al:15
....................CUGCUACUUGGACaUUUUUCA....................................................... len:21 al:1
....................CUGCUgCUUGGACUUUUUUC........................................................ len:20 al:1
....................CUGCUACUUGGACUgUUUUCA....................................................... len:21 al:3
....................CUGCUACUUGGACcUUUUUC........................................................ len:20 al:3
....................CUGCUACUUGGACUUUUUUa........................................................ len:20 al:11
....................CcGCUACUUGGACUUUUUU......................................................... len:19 al:1
....................CUGCUACUUGGACUUUUa.......................................................... len:18 al:1
....................CUGuUACUUGGACUUUUUUCA....................................................... len:21 al:6
....................CUGCUACUUGGgCUUUUUUC........................................................ len:20 al:1
....................CUcCUACUUGGACUUUUUUCA....................................................... len:21 al:1
....................CUGCUACUUGGACUUcUUUC........................................................ len:20 al:1
....................CUGCUgCUUGGACUUUUUUCA....................................................... len:21 al:14
....................CUGCUACUUGGACUUUUUaCA....................................................... len:21 al:1
....................CUGCUACUUGGACUUUgUUC........................................................ len:20 al:1
....................CUGCUACUUGGACUUUUUUCc....................................................... len:21 al:8
....................CUGCUACUUGGAuUUUUUUCAC...................................................... len:22 al:1
....................CUGCUAuUUGGACUUUUUUCA....................................................... len:21 al:2
....................CUaCUACUUGGACUUUUUUCA....................................................... len:21 al:8
....................CUGCUACUUGGAuUUUUUUCA....................................................... len:21 al:16
....................CUGCUACUUGGAuUUUUUUC........................................................ len:20 al:8
....................CaGCUACUUGGACUUUUUUC........................................................ len:20 al:1
....................CUGCUACUUGGACUUUaUUCA....................................................... len:21 al:1
....................CUGCUACUUGGACUUUUUc......................................................... len:19 al:2
....................uUGCUACUUGGACUUUUUUC........................................................ len:20 al:5
....................CUGCUACUUGGACUUUUUU......................................................... len:19 al:52
....................CUGCUACUUGGACUUUUUUaA....................................................... len:21 al:4
....................aUGCUACUUGGACUUUUUUCA....................................................... len:21 al:5
....................CUGCUACcUGGACUUUUUUCA....................................................... len:21 al:11
....................CUGCUACUUGGACUaUUUUCA....................................................... len:21 al:1
....................gUGCUACUUGGACUUUUUUCA....................................................... len:21 al:8
....................CUGCgACUUGGACUUUUUUCA....................................................... len:21 al:1
....................CUGCUACUUGGACUUUcUU......................................................... len:19 al:2
....................CUGCUACUUGGACUUUcUUCA....................................................... len:21 al:11
....................CUGCUACUcGGACUUUUUUCA....................................................... len:21 al:21
....................CUGCUACUUGGgCUUUUUUCA....................................................... len:21 al:23
....................CgGCUACUUGGACUUUUUUCA....................................................... len:21 al:3
....................CUGCUACUUGGACUUUUUUCACGU.................................................... len:24 al:3
....................CUGCUACUUGGACUUUUUUCA....................................................... len:21 al:5044
....................uUGCUACUUGGACUUUUUUCA....................................................... len:21 al:43
....................CUGCUACUUGGACUUUUUUaAC...................................................... len:22 al:1
....................CUGCUACUUGGACUUUUU.......................................................... len:18 al:24
....................CUGCUACUUGGACUUUUUgCA....................................................... len:21 al:1
....................CUGCUACUUGGACUUUUUUCg....................................................... len:21 al:61
....................CUGaUACUUGGACUUUUUUCA....................................................... len:21 al:1
....................CUGCUACUUGGACUUUUcUCA....................................................... len:21 al:12
....................CUGCUACUUGGACUUUUUUC........................................................ len:20 al:279
....................CUGCUACUUGGACUUUUUUCACGUU................................................... len:25 al:1
....................CUGCaACUUGGACUUUUUUCA....................................................... len:21 al:3
....................CUGCUACUUGGACUUUUaUCA....................................................... len:21 al:1
....................CUGCUACUUGGACUUUUUUCAg...................................................... len:22 al:3
....................CUGCUACUUaGACUUUUUUCA....................................................... len:21 al:5
....................CUGCUACUUGGACUUUUUUCACG..................................................... len:23 al:2
....................CcGCUACUUGGACUUUUUUCA....................................................... len:21 al:15
....................CUGCUACUUGGACUUaUUUCA....................................................... len:21 al:1
....................CUGCUACUUGGuCUUUUUUCA....................................................... len:21 al:1
....................CUGCUACUaGGACUUUUUUCA....................................................... len:21 al:2
....................CUGCUACUUGGACcUUUUUCA....................................................... len:21 al:25
....................CUGCcACUUGGACUUUUUUCA....................................................... len:21 al:3
....................CUGCUACUUGGACUUUUUUCAu...................................................... len:22 al:60
....................CUGCUACUUGGACUUUUUUCAa...................................................... len:22 al:9
....................CUGCUACgUGGACUUUUUUCA....................................................... len:21 al:1
....................CUGCcACUUGGACUUUUUUC........................................................ len:20 al:1
....................CUGCUACUUGGACUUUUc.......................................................... len:18 al:3
....................CUGCUACUUGaACUUUUUUCA....................................................... len:21 al:1
....................CaGCUACUUGGACUUUUUUCA....................................................... len:21 al:11
....................CUGCUACUUGGACUUUUUUCACa..................................................... len:23 al:2
....................CUGCUACUUGGACUUUUaU......................................................... len:19 al:2
....................CUGCUACUUGGACUUUUUUu........................................................ len:20 al:58
....................CUGCUACUUGGACUUcUUUCA....................................................... len:21 al:9
....................CUGCUACaUGGACUUUUUUCA....................................................... len:21 al:3
....................CUGCUACUUGGACUUUUUcCA....................................................... len:21 al:56
....................CUGCUACUUGGACUUUUcUC........................................................ len:20 al:1
....................CUGCUACUUGGACUcUUUUCA....................................................... len:21 al:9
....................CUGCUACUcGGACUUUUUUC........................................................ len:20 al:2
....................CUGCUACUUGGACUUUUUa......................................................... len:19 al:2
....................CUuCUACUUGGACUUUUUUCA....................................................... len:21 al:1
.....................UGCUcCUUGGACUUUUUUCA....................................................... len:20 al:1
.....................UGCUACUUGGACUcUUUUCA....................................................... len:20 al:3
.....................UGCUACUUGGACUUUUUU......................................................... len:18 al:14
.....................UGCUACUUGGACUUUUUcCA....................................................... len:20 al:12
.....................UGCUACUUGGgCUUUUUUCA....................................................... len:20 al:7
.....................UGCUACUUGGACUUUUUUa........................................................ len:19 al:1
.....................UGCUACUUGGACUUUUUUCACG..................................................... len:22 al:8
.....................UGCUACUUGGAuUUUUUUCA....................................................... len:20 al:14
.....................UGCcACUUGGACUUUUUUCA....................................................... len:20 al:3
.....................UuCUACUUGGACUUUUUUCA....................................................... len:20 al:3
.....................UGCUACUUGGACUUUUUUuA....................................................... len:20 al:4
.....................UGCUgCUUGGACUUUUUUCA....................................................... len:20 al:2
.....................UGCUACUUGGACUUUUaU......................................................... len:18 al:1
.....................UGCUACUUGGgCUUUUUUC........................................................ len:19 al:1
.....................UaCUACUUGGACUUUUUUCA....................................................... len:20 al:1
.....................UGCUACUUGGACcUUUUUCA....................................................... len:20 al:4
.....................UGCUACUUaGACUUUUUUCA....................................................... len:20 al:6
.....................UGaUACUUGGACUUUUUUCA....................................................... len:20 al:1
.....................UGCUACUUGGACUUUUUUCAu...................................................... len:21 al:11
.....................UGCUACUcGGACUUUUUUCA....................................................... len:20 al:1
.....................UGuUACUUGGACUUUUUUCA....................................................... len:20 al:4
.....................UGCUACUUGGACUUUUUUCACGU.................................................... len:23 al:2
.....................gGCUACUUGGACUUUUUUCA....................................................... len:20 al:2
.....................aGCUACUUGGACUUUUUUCA....................................................... len:20 al:4
.....................UGCUACUUGGACUUUUUUCA....................................................... len:20 al:939
.....................UGCUACUUGGACUUUgUUCA....................................................... len:20 al:1
.....................UGCUACUUGGACUUUUUa......................................................... len:18 al:2
.....................UGCUACUUGGACUUUUcUCA....................................................... len:20 al:1
.....................UGCUACUUGGACUUUUUUCu....................................................... len:20 al:11
.....................cGCUACUUGGACUUUUUUCA....................................................... len:20 al:4
.....................UGCUACUUGGACUUUUUUCACa..................................................... len:22 al:13
.....................UGCUACUUGGACUUUUUUu........................................................ len:19 al:15
.....................UGCUACUUGGACUUUUUUCACu..................................................... len:22 al:2
.....................UGCUACUUGGACUUUUUUCg....................................................... len:20 al:14
.....................UGCUACUUGGACUUUcUUCA....................................................... len:20 al:2
.....................UGCUACcUGGACUUUUUUCA....................................................... len:20 al:2
.....................UGCUACUUGGACUUUUUUCAC...................................................... len:21 al:3
.....................UGCUACUUGGACUUUUUUC........................................................ len:19 al:59
.....................UGCUACUUGGACUUUUUUaA....................................................... len:20 al:1
.....................UGaUACUUGGACUUUUUUC........................................................ len:19 al:1
.....................UGCUACUUGGACUUUUUUCc....................................................... len:20 al:1
......................GCUACUUGGACUUUUUcCA....................................................... len:19 al:1
......................GCUACUUGGACUUUUUUCACa..................................................... len:21 al:1
......................GCUACUUGGACUUUUUUCACu..................................................... len:21 al:2
......................GCUACUUGGACUUUUUUu........................................................ len:18 al:1
......................aCUACUUGGACUUUUUUCA....................................................... len:19 al:1
......................GCUACUUGGACUUUUUUCA....................................................... len:19 al:16
......................GCUACUUGGACUUUUUUCAu...................................................... len:20 al:2
.......................CUACUUGGACUUUUUUCACu..................................................... len:20 al:1
.......................CUACUUGGACUUUUUUCACuU.................................................... len:21 al:1
...........................UUGGACUUUUUUCACGUU................................................... len:18 al:1
...........................UUGGACUUUUUUCACGUUUAUCGA............................................. len:24 al:1
...........................UUGGACUUUUUUCACGUUUAUCGAUGAA......................................... len:28 al:1
...............................................UCGAUGAAAGAAGUACAAGU............................. len:20 al:1
................................................CGAUcAAAGAAGUACAAGUGGUAGGG...................... len:26 al:2
.................................................GAUGAAAGAAGUACAAGUGGU.......................... len:21 al:1
..................................................AUGAAAGAAGUACAAGUGGU.......................... len:20 al:4
..................................................AUGAAAGAAGUACAAGUGGUAGGu...................... len:24 al:1
..................................................AUGAAAGAAuUACAAGUGGUAGG....................... len:23 al:1
..................................................AUGAAAGAAGUACAAGUGGUAGu....................... len:23 al:3
..................................................AUGAAAGAAGUACAAGUuGUAGG....................... len:23 al:1
..................................................AUGAAAGAAGUACAAGUGGUAGa....................... len:23 al:2
..................................................AUGAAuGAAGUACAAGUGGUA......................... len:21 al:1
..................................................AUGAAAGAAGUACAAGUGGc.......................... len:20 al:1
..................................................AUGAAAGAAGUACAAGUGGUA......................... len:21 al:2
..................................................uUGAAAGAAGUACAAGUGGUAGG....................... len:23 al:1
..................................................AUGAAAGAAGUACAAGUGGUAGG....................... len:23 al:11
...................................................UGAAAGAAGUACAAGUGGc.......................... len:19 al:2
...................................................UGAAAGAAGUACAAGUGGUAGGGuU.................... len:25 al:1
...................................................UGAAAGAAGUgCAAGUGGUAGGG...................... len:23 al:1
...................................................UGAAAGAAGUACAAGUGGUAGu....................... len:22 al:13
...................................................UGAAAGAAGUACAAGUGGUAGGGu..................... len:24 al:5
...................................................UGAAAGAAGUACgAGUGGUAGG....................... len:22 al:2
...................................................UGAAAGAAGUACAAGUGGUAa........................ len:21 al:3
...................................................UGAAAGAAGUACAAGUGGUAGGa...................... len:23 al:3
...................................................UGAAgGAAGUACAAGUGGUAGG....................... len:22 al:1
...................................................UGAAAGAAGUACAgGUGGUA......................... len:20 al:1
...................................................UGAAAGAAGUACAAGUGGUAGc....................... len:22 al:4
...................................................UGAAAGAAGUACAAGUGGUAGGc...................... len:23 al:1
...................................................UGAAAGAAGUACAAGaGGUAGG....................... len:22 al:1
...................................................UGAAAGAAGUACAAGcGGU.......................... len:19 al:1
...................................................UGAAAGAAGUACAAGUGGUAGa....................... len:22 al:27
...................................................UGAAAGAAGUACAAGUGGUAG........................ len:21 al:11
...................................................aGAAAGAAGUACAAGUGGUA......................... len:20 al:1
...................................................UGAAAGAAGUACAAGUGGUAGGG...................... len:23 al:11
...................................................UcAAAGAAGUACAAGUGGUAGG....................... len:22 al:1
...................................................UGAAAGAAGUACAAGUGGUAGaG...................... len:23 al:1
...................................................UGAAAGAAGUACAAGUGGUAGG....................... len:22 al:93
...................................................UGAAAGAAGUACAAGUGGU.......................... len:19 al:16
...................................................UGAAAGAAGUACAAGUGG........................... len:18 al:1
...................................................UGAAAGAAGUACAAGUGGUAGGu...................... len:23 al:1
...................................................UGAAAGAAGUACAAGUGGUA......................... len:20 al:18
...................................................UGAAAGAgGUACAAGUGGUAGG....................... len:22 al:1
....................................................aAAAGAAGUACAAGUGGUAG........................ len:20 al:2
....................................................cAAAGAAGUACAAGUGGUAG........................ len:20 al:2
....................................................cAAAGAAGUACAAGUGGUAGG....................... len:21 al:2
....................................................GAAAGAAGUACAAGUGGUAGGGu..................... len:23 al:1
....................................................cAAAGAAGUACAAGUGGUAGGG...................... len:22 al:1
....................................................aAAAGAAGUACAAGUGGUAGGG...................... len:22 al:3
.....................................................AAAGAAGUACAAGUGGUAGGGAcU................... len:24 al:3
.....................................................AAAGAAGUACAAGUaGUAGGGA..................... len:22 al:1
.....................................................AAAGAgGUACAAGUGGUAGG....................... len:20 al:23
.....................................................AAAGAAGUACAAGUGGUAGGGAa.................... len:23 al:13
.....................................................AAAGAcGUACAAGUGGUAGG....................... len:20 al:1
.....................................................AAAGAAGUACAAGUGGUuGG....................... len:20 al:6
.....................................................AAgGAAGUACAAGUGGUAGGGA..................... len:22 al:1
.....................................................AAAGAAGUAuAAGUGGUAGG....................... len:20 al:7
.....................................................AAAGAAGUACcAGUGGUAGGG...................... len:21 al:7
.....................................................AAAGAAGUACAAGUGGUAGGu...................... len:21 al:1106
.....................................................AAAGAAGUACAAGUGGUAGGa...................... len:21 al:6571
.....................................................AAAuAAGUACAAGUGGUAG........................ len:19 al:2
.....................................................AAAGAAGUACAAGUGGUuGGGA..................... len:22 al:2
.....................................................AAAGAAuUACAAGUGGUAGG....................... len:20 al:7
.....................................................AAAGAAuUACAAGUGGUAGGGA..................... len:22 al:1
.....................................................AAAGAAGUACAAGUGGUAGGGcUU................... len:24 al:8
.....................................................AAAGAAGUACAAGUGGUuG........................ len:19 al:6
.....................................................AAAGAAGUACAAaUGGUAG........................ len:19 al:3
.....................................................AAAGAAGUACAAGUGGUgGG....................... len:20 al:21
.....................................................AAAGAAGUACAAGUGGUAGGGg..................... len:22 al:194
.....................................................AAAGAAGUgCAAGUGGUAGGGA..................... len:22 al:4
.....................................................AAAGAAGUACAAGUGGUAaGGA..................... len:22 al:1
.....................................................AAAGAAGUACAcGUGGUAGGG...................... len:21 al:5
.....................................................AAAGAAGUACgAGUGGUAGGG...................... len:21 al:98
.....................................................AAAGgAGUACAAGUGGUA......................... len:18 al:3
.....................................................AAAGgAGUACAAGUGGUAGGGA..................... len:22 al:5
.....................................................AAAGAAGUACAAGUGGUg......................... len:18 al:18
.....................................................AAAGAAGUACAAGUGGUAcG....................... len:20 al:10
.....................................................AAAuAAGUACAAGUGGUAGGG...................... len:21 al:4
.....................................................AAAGAAGUAuAAGUGGUAGGG...................... len:21 al:24
.....................................................AcAGAAGUACAAGUGGUAG........................ len:19 al:6
.....................................................AAAGAAGUACAAGUGGUA......................... len:18 al:1309
.....................................................AAuGAAGUACAAGUGGUAGG....................... len:20 al:2
.....................................................AAAGAAuUACAAGUGGUAG........................ len:19 al:2
.....................................................AAAGAAcUACAAGUGGUAGGG...................... len:21 al:2
.....................................................AAAGAAuUACAAGUGGUAGGG...................... len:21 al:2
.....................................................AAAGAAGUACAAGUGGaAGG....................... len:20 al:1
.....................................................AAAGAAGUACAAGUGGUAuGG...................... len:21 al:5
.....................................................AAcGAAGUACAAGUGGUAG........................ len:19 al:4
.....................................................AAAGAAGUACAAGUGGaAGGG...................... len:21 al:1
.....................................................AAAGAAGUAaAAGUGGUAG........................ len:19 al:2
.....................................................AAAGAAGUgCAAGUGGUAG........................ len:19 al:27
.....................................................AAAGAAGUACgAGUGGUA......................... len:18 al:7
.....................................................AAAGAAGUAgAAGUGGUAGG....................... len:20 al:2
.....................................................AAAGAAGUACAAGUGGUAGGGAc.................... len:23 al:5
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.....................................................AAAGAAGUACAAGcGGUAG........................ len:19 al:36
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.....................................................AAAGAAGUACAAuUGGUAG........................ len:19 al:2
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.....................................................AAAGAAGUACAAGUGGUAGGGA..................... len:22 al:916
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.....................................................AAAGAAGUACAAGgGGUAGGGA..................... len:22 al:1
.....................................................AAAGuAGUACAAGUGGUAGG....................... len:20 al:2
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.....................................................AAAGAAGUACAAGUGGUAGGc...................... len:21 al:397
.....................................................AAAGAAGcACAAGUGGUAGGG...................... len:21 al:26
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.....................................................AAAGAAGUACAAGaGGUAGG....................... len:20 al:2
.....................................................AAAGAAGUACAAGUGaUAGG....................... len:20 al:5
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.....................................................AAAGAAGUACAAGaGGUAG........................ len:19 al:4
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.....................................................AAAGAAGUACAAGUGGcAGGGA..................... len:22 al:5
.....................................................AAAGAAGUACAAGUGGUAGGGu..................... len:22 al:8255
.....................................................AAAGAAGUACAAGUGGUAaGG...................... len:21 al:24
.....................................................AAAGAAGUACAAGUGGUgGGGA..................... len:22 al:1
.....................................................AAAGAAGUACAAGUGGUAGGGAUU................... len:24 al:14
.....................................................AAAGAAGUACAAGUGGgAGG....................... len:20 al:2
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.....................................................AAAGAAGUACAAuUGGUAGG....................... len:20 al:2
.....................................................AAAGAAGUACAAGUGGUAGGGgU.................... len:23 al:9
.....................................................AcAGAAGUACAAGUGGUAGG....................... len:20 al:6
.....................................................AAAGAAGUACuAGUGGUAGGGA..................... len:22 al:1
.....................................................AAAGAAGUACuAGUGGUAGGG...................... len:21 al:14
.....................................................AAAGAAGUACAAGUGGaAGGGA..................... len:22 al:2
.....................................................AAAGAAGUACcAGUGGUAG........................ len:19 al:4
.....................................................AAAGAAGUAuAAGUGGUA......................... len:18 al:2
.....................................................AAAGAAGUACAAGUGGUuGGG...................... len:21 al:12
.....................................................AAAGAAGUACAAGUGGUAGGGcU.................... len:23 al:76
.....................................................AAAGAAGUACAAGUGGgAGGG...................... len:21 al:3
.....................................................AAAGAAGUACAAGUGGc.......................... len:17 al:8
.....................................................AAAGAAGUcCAAGUGGUAGGG...................... len:21 al:3
.....................................................AAAGAAGUACAAGUGGUAGGGAUc................... len:24 al:1
.....................................................AAAGAAaUACAAGUGGUAGG....................... len:20 al:7
.....................................................AAAGAAGUACAAGUGGUAGGcA..................... len:22 al:10
.....................................................AAAGAAGUACuAGUGGUAGG....................... len:20 al:3
.....................................................AAAGAAGUAuAAGUGGUAG........................ len:19 al:17
.....................................................AAAGAAGUACuAGUGGUAG........................ len:19 al:9
.....................................................AAAGAAGUACAAGUGGUAGu....................... len:20 al:347
.....................................................AAAGAAGUACAAGUGGcAGGG...................... len:21 al:25
.....................................................AAcGAAGUACAAGUGGUAGGGA..................... len:22 al:2
.....................................................AAAGAgGUACAAGUGGUAGGGA..................... len:22 al:4
.....................................................AAAGAAGUACAAGUGGUAGuG...................... len:21 al:17
.....................................................AAAGAAGUACAAGgGGUAG........................ len:19 al:3
.....................................................AAAGAAGUACAgGUGGUAG........................ len:19 al:44
.....................................................AAAGAAGUACAAGUGGUAc........................ len:19 al:78
.....................................................cAAGAAGUACAAGUGGUAG........................ len:19 al:5
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.....................................................AAAGAAGUACAAGcGGUAGG....................... len:20 al:10
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.....................................................AAAGAAGUACAAGUGGUgG........................ len:19 al:65
.....................................................AAAGAAGUACAAGUGGUAGGG...................... len:21 al:18322
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.....................................................AAAGAAGUACAAGaGGUAGGG...................... len:21 al:8
.....................................................AAuGAAGUACAAGUGGUAG........................ len:19 al:3
.....................................................AAAGAgGUACAAGUGGUA......................... len:18 al:11
.....................................................AcAGAAGUACAAGUGGUAGGG...................... len:21 al:12
.....................................................AAAGAAGUACAAGUuGUAGGG...................... len:21 al:6
.....................................................AAAGAAGUACAAGUGGUAGGGuU.................... len:23 al:1304
.....................................................AAAGAAGUACAAGUGGgAG........................ len:19 al:6
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.....................................................AAAGAAGUACAAGUaGUAGGG...................... len:21 al:8
.....................................................AAAGAAGUACAAGUGGUcGGG...................... len:21 al:4
.....................................................AAAGAAGUACgAGUGGUAG........................ len:19 al:57
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.....................................................AAgGAAGUACAAGUGGUA......................... len:18 al:7
.....................................................AAAGgAGUACAAGUGGUAG........................ len:19 al:44
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.....................................................AAAGAAGUACAgGUGGUAGGG...................... len:21 al:81
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.....................................................AAAGAgGUACAAGUGGUAGGG...................... len:21 al:71
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.....................................................uAAGAAGUACAAGUGGUAG........................ len:19 al:40
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.....................................................AgAGAAGUACAAGUGGUAGGG...................... len:21 al:130
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.....................................................AAAGAAGUACAAGUGGUAGGaA..................... len:22 al:3
.....................................................AAAGAAGUACAgGUGGUAGG....................... len:20 al:24
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.....................................................AAAGAAaUACAAGUGGUAG........................ len:19 al:7
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.....................................................AAAGgAGUACAAGUGGUAGG....................... len:20 al:20
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.....................................................cAAGAAGUACAAGUGGUAGGGA..................... len:22 al:2
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......................................................AAGAAGUACAAGUGGUAGGa...................... len:20 al:64
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.......................................................AGAAGUACAAGUGGUAGGa...................... len:19 al:8
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.........................................................AAGUACAAGUGGUAGGGuU.................... len:19 al:1
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..........................................................................AUUGGGCUGUUAACCACAUC.. len:20 al:6
...........................................................................UUGGGCUGUUAACCACAUC.. len:19 al:2