Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/output/11-Apul-sRNA-ShortStack-pulchra_genome/ShortStack_out/merged_alignments.bam
Location: ptg000007l:915905-916002 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/output/11-Apul-sRNA-ShortStack-pulchra_genome/ShortStack_out/strucVis/Cluster_4220.ps.pdf
Locus Name: Cluster_4220
UACAUUACAACCUCAUUCCCAGGGUCUCUCUUCUUCCCUUUCCCUGGUGAGAGGAAAGGAAGAAAGGAGACCCUGGGAAUGAGGUUGGCCACAUGAAA
.......((((((((((((((((((((((.(((((((.(((((((....)).)))))))))))).))))))))))))))))))))))........... (-63.10)
....................uGGGUCUCUCUUCUUCCCUUUCC....................................................... len:23 al:2
......................................................AAAGGAAGAAAGGAGACgCU........................ len:20 al:4
......................................................AAAGGAAGAAAGGAGACCCUGc...................... len:22 al:4
......................................................AAAGGAAGAAAGGAGACCu......................... len:19 al:3
......................................................AAAGGAAGAAAGGAGACCC......................... len:19 al:2
......................................................AAAGGAAGAAAGGAGgCCCUGGG..................... len:23 al:1
......................................................AAAGGAAGAAgGGAGACCCU........................ len:20 al:5
......................................................AAAGGAAGAAAGGAGACCCUGu...................... len:22 al:14
......................................................AAAGGAAGAAAGGAGACCCU........................ len:20 al:26
......................................................AAAGGAAGAAAGGAGACCCUa....................... len:21 al:3
......................................................AAAGGAAGAAAGGAGACCa......................... len:19 al:1
......................................................AAAGGAAGAAAGGAGACCCa........................ len:20 al:5
......................................................AAAGGAAGAAAGGAGACgCUG....................... len:21 al:3
......................................................AAAGGAAGAAAGGAGgCCCUGG...................... len:22 al:41
......................................................AAAGGAAGAAAGGAGACCCc........................ len:20 al:6
......................................................AAAGGAAGAAAGGAGACCCUGGc..................... len:23 al:3
......................................................AAAGGAgGAAAGGAGACCCUGG...................... len:22 al:1
......................................................AAAGGAAGAAAGGAGACgCUGG...................... len:22 al:9
......................................................AAAGGAAGAgAGGAGACCCU........................ len:20 al:2
......................................................AAAGGAAGAAAGGAGACCCUaG...................... len:22 al:1
......................................................AAAGGAAGAAAGGAGACCCUGa...................... len:22 al:58
......................................................cAAGGAAGAAAGGAGACCCU........................ len:20 al:2
......................................................AAAGGAAGAAAGGAGACCCUGGG..................... len:23 al:2
......................................................AAAGGAAGAAAGGAGACCCUGG...................... len:22 al:139
......................................................AAAGGAAGAAAGGAGgCCCU........................ len:20 al:8
......................................................AAAGGAAGAAAGGAGACCCUG....................... len:21 al:1
......................................................AAAGGAAGAAAGGAGACCCUGGu..................... len:23 al:22
......................................................AAAGGAAGAAgGGAGACCCUGG...................... len:22 al:21
......................................................AAAGGAAGAgAGGAGACCCUGG...................... len:22 al:1
......................................................AAAGGAAGAAAGGAGACCCg........................ len:20 al:3
......................................................AAAGGAAGgAAGGAGACCCUGG...................... len:22 al:4
.......................................................AAGGAAGAAAGGAGACCCU........................ len:19 al:1
.......................................................AAGGAAGAAAGGAGACCCa........................ len:19 al:1
.......................................................AAGGAAGAAAGGAGACCCUGa...................... len:21 al:1
.......................................................AAGGAAGAAAGGAGgCCCU........................ len:19 al:1
.......................................................AAGGAAGAAAGGAGACCCUGG...................... len:21 al:9
.......................................................AAGGAAGAAuGGAGACCCUGG...................... len:21 al:1
.......................................................AAGGAAGAAAGGAGgCCCUGG...................... len:21 al:2
........................................................AGGAAGAAgGGAGACCCUGG...................... len:20 al:1