Genome: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/data/Apulchra-genome.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/output/11-Apul-sRNA-ShortStack-pulchra_genome/ShortStack_out/merged_alignments.bam
Location: ptg000035l:4339550-4339641 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/deep-dive-expression/D-Apul/output/11-Apul-sRNA-ShortStack-pulchra_genome/ShortStack_out/strucVis/Cluster_18711.ps.pdf
Locus Name: Cluster_18711
UCAGCAAGUGUGUGGUUGCAAGGGUAUUGUCUAUGAUCAAAAAUUUUGUUAUUGAUUGUAGACAAGCCUCUGACAACCAUCCAUAUUAUUGC
...(((((((.(((((((((.((((.((((((((((((((.(((...))).)))))))))))))))))).)).))))))).)))....)))) (-35.20)
UCAGCAAGUGUGUGGUUGC......................................................................... len:19 al:1
....................AGGGUAUUGUCaAUGAUCAAAAA................................................. len:23 al:1
....................AGGGUAUUGUCUAUGAUCAAAAAUU............................................... len:25 al:7
....................AGGGUAUUGUCUAUGAUCAAAu.................................................. len:22 al:3
....................AGGGUAUUGUCUAUGAUCAAAAAUc............................................... len:25 al:2
....................AGGGaAUUGUCUAUGAUCAAAAA................................................. len:23 al:3
....................AGaGUAUUGUCUAUGAUCAAAAA................................................. len:23 al:1
....................AGGGUAUUGUCcAUGAUCAAAAA................................................. len:23 al:2
....................AGGGUAUUGUCUAUGAUCAAAAAUUUU............................................. len:27 al:3
....................AGGGUAUUGUCUAUGAUCA..................................................... len:19 al:4
....................gGGGUAUUGUCUAUGAUCAAAA.................................................. len:22 al:7
....................AGGGUAUUGUCUAUGAUCAAAgA................................................. len:23 al:2
....................AGGGUAUUaUCUAUGAUCAAAA.................................................. len:22 al:1
....................AGGGUAUcGUCUAUGAUCAAA................................................... len:21 al:1
....................AGGGUAUUGUCUAUGAUCAAAA.................................................. len:22 al:193
....................AGGGUAUUGUCUAUGAUCgAAA.................................................. len:22 al:4
....................AGGGUAUUGUCUAUGAUCgAAAAU................................................ len:24 al:1
....................gGGGUAUUGUCUAUGAUCA..................................................... len:19 al:1
....................AGGGUAUUGcCUAUGAUC...................................................... len:18 al:1
....................AGGGUAUUGUCUAaGAUCAAAAA................................................. len:23 al:1
....................AGGGUAcUGUCUAUGAUC...................................................... len:18 al:1
....................AGGGUAUUGUCUAUGAUCAAAAAUUUUGUU.......................................... len:30 al:3
....................AGGGUAUUGUCUAgGAUCAAAAAU................................................ len:24 al:1
....................AGGGUAUUGUCUAUGAUCAAAAAc................................................ len:24 al:17
....................AGGGUAUUGUCUAUGAUCAAAuA................................................. len:23 al:2
....................AGGGUAUUGUCUAcGAUCAAAAAU................................................ len:24 al:1
....................AGGGUAUUGUCUAUGAUCAAAAu................................................. len:23 al:12
....................AGGGUAUUGUCUAcGAUC...................................................... len:18 al:2
....................AGGGUAUUGUCUAUGAUCAAAAgU................................................ len:24 al:2
....................AGGGUAUUGUCUAUGAUCAAAAg................................................. len:23 al:1
....................AGGGUAUUGUCUAUGAUu...................................................... len:18 al:16
....................AGGGUAUUGUCUAUGAUCAAAg.................................................. len:22 al:1
....................AGGGUAUUGUCUAUGgUCAAAA.................................................. len:22 al:1
....................AGGGUAUUGUCUAUGAUCAgAAA................................................. len:23 al:1
....................AGGGUAUUGUCUAUGAUCAAAAAa................................................ len:24 al:44
....................gGGGUAUUGUCUAUGAUCAAAAAU................................................ len:24 al:3
....................AGGGUAUUGUCUAUGAUCAAAAA................................................. len:23 al:436
....................AGGGUAUUGUCUAUGAUCAAA................................................... len:21 al:60
....................uGGGUAUUGUCUAUGAUCAAAAAU................................................ len:24 al:2
....................AGGGUAUUGcCUAUGAUCAAAAA................................................. len:23 al:2
....................AGGGUAUUGUCUAcGAUCAAAA.................................................. len:22 al:1
....................AGGGUAUUGUCUAUGAUCAAAAAUUU.............................................. len:26 al:9
....................AGGGUAUUGUCUAUGAUCAAAAAUa............................................... len:25 al:1
....................AGGGcAUUGUCUAUGAUCAAAAA................................................. len:23 al:4
....................AGGGUAUUGUCUAUG......................................................... len:15 al:1
....................uGGGUAUUGUCUAUGAUCAAAAA................................................. len:23 al:1
....................AGGGUAUUGUCUAUGAUCAAAAAUUUUGU........................................... len:29 al:3
....................AGGGUAUUGUCUAUGAUCAAAgAUUU.............................................. len:26 al:1
....................AGGGUAUUGUCUAUGAUCAu.................................................... len:20 al:1
....................AGGGUAUUGUaUAUGAUCAAAAA................................................. len:23 al:2
....................AGGGUAcUGUCUAUGAUCAAAAA................................................. len:23 al:4
....................AGGGUAUUGUCUAUGAUCAAAAAU................................................ len:24 al:187
....................AGGGUAUUGUCUAUGAUC...................................................... len:18 al:125
....................AGGaUAUUGUCUAUGAUC...................................................... len:18 al:4
....................AGGGUAcUGUCUAUGAUCAAAA.................................................. len:22 al:1
....................AGGGUAUUGUCUAUGAUCAAgAAU................................................ len:24 al:2
....................AGGGcAUUGUCUAUGAUCAAAA.................................................. len:22 al:1
....................AGGGUAUUGUCUAUGAcCAAAAA................................................. len:23 al:4
....................AGGGUAUcGUCUAUGAUCAAAAA................................................. len:23 al:2
....................AGaGUAUUGUCUAUGAUCAAAAAUUUUGUU.......................................... len:30 al:1
....................gGGGUAUUGUCUAUGAUC...................................................... len:18 al:3
....................gGGGUAUUGUCUAUGAUCAAAAA................................................. len:23 al:9
....................AGGGUAUUGUCUAUGAUa...................................................... len:18 al:4
....................AGGGUAUUGUCUAUGAUCAAAAuUU............................................... len:25 al:1
....................AGGGUAUUGUCUAUGgUC...................................................... len:18 al:1
....................AGGGUgUUGUCUAUGAUC...................................................... len:18 al:2
....................AGGGUAUUGUCUAUGAUCAAgA.................................................. len:22 al:1
....................AGGGUAUUGUCUAUGAUCAA.................................................... len:20 al:10
....................uGGGUAUUGUCUAUGAUCAAAA.................................................. len:22 al:2
....................AGGGUAUUGUCUAUGAU....................................................... len:17 al:1
....................AGGGcAUUGUCUAUGAUCAAAAAU................................................ len:24 al:5
....................AGGGUAUcGUCUAUGAUCAAAAAU................................................ len:24 al:1
.....................GGGUAUUGUCUAUGAUCAAAu.................................................. len:21 al:1
.....................GGGUAUUGUCUAUGAUCAAAAAU................................................ len:23 al:2
..........................................AUUUUGUUAUUGAUUGUAGACAAGCCUCUG.................... len:30 al:2
..........................................AUUUUGUUAUUGAUUGUAGACAAGCCUCUGA................... len:31 al:9
...........................................UUUUGUUAUUGAUUGUAGACAAGCCUCUGAu.................. len:31 al:1
...........................................UUUUGUUAUUGAUUGUAGACAAGCCUCUG.................... len:29 al:1
...........................................UUUUGUUAUUGAUUGUAGACAAGCCUCUGu................... len:30 al:1
...........................................UUUUGUUAUUGAUUGUAGACAAGCCUaUGA................... len:30 al:1
...........................................UUUUGUUAUUGAUUGUAGACAAGCCUCUa.................... len:29 al:1
...........................................UUUUGUUAUUGAUUGUAGACAAGCCUCUu.................... len:29 al:1
...........................................UUcUGUUAUUGAUUGUAGACAAGCCUCUGA................... len:30 al:1
...........................................UUUUGUUAUUGAUUGUAGACAAGuCUCUGA................... len:30 al:1
...........................................UUUUGUUAUUGAUUGUAGACAAGCCUCUGg................... len:30 al:1
...........................................UUUUGUUAUUGAUUGUAGACAAGCCUCUGA................... len:30 al:7
.............................................UUGUUAUUGAUUGUAGACAAGu......................... len:22 al:1
..............................................UGUUAUUGAUUGUAGACAAGCCUCUGA................... len:27 al:1
...............................................GUUAUUGAUUGUAGACAAGCCUCUGA................... len:26 al:2
...............................................GUUAUUGAUUGUAGACAAGCCcCUGA................... len:26 al:1
................................................UUAUUGAUUGUAGACAAGCCUCUGA................... len:25 al:3
................................................UUAUUGAUUGUAGACAAGCCUC...................... len:22 al:1
................................................UUAUUGAUUGUAGACAAGCCUCUGAu.................. len:26 al:1
.................................................UAUUGAUUGUAGACAAGCCUCU..................... len:22 al:4
.................................................UAUUGAUUGUAGACAAGCCUCUGA................... len:24 al:1
.................................................cAUUGAUUGUAGACAAGCCUCUG.................... len:23 al:1
.................................................UAUUGAUUGUAGACAAGCCUCa..................... len:22 al:2
.................................................UAUUGAUUGUAGACAAGCCUCUu.................... len:23 al:1
.................................................UAUUGAUUGUAGACAAGCCUCUGAu.................. len:25 al:4
.................................................UAUUGAUUGUAGACAAGCCUCUGACu................. len:26 al:2
.................................................UAUUGAUUGUAGACAAGCCUCUGu................... len:24 al:3
..................................................AUUGAUUGUAGACAAGCCUCUGACc................. len:25 al:34
..................................................AgUGAUUGUAGACAAGCCUCUGA................... len:23 al:4
..................................................AUUGAUUGUAGACgAGCCUCUGAC.................. len:24 al:2
..................................................AUUGAUUGUAGACAAGCuUCUGA................... len:23 al:12
..................................................AUUGAUUGUgGACAAGCCUC...................... len:20 al:4
..................................................AUUaAUUGUAGACAAGCCUCU..................... len:21 al:3
..................................................AUUGAUUGUAGACgAGCCUC...................... len:20 al:8
..................................................AUUGAUUGUAGACAAGCaUC...................... len:20 al:2
..................................................AUUGAUUGUAGACAAGCCcCU..................... len:21 al:78
..................................................AUUGAUUGUAGACAAGCCUuUGA................... len:23 al:8
..................................................gUUGAUUGUAGACAAGCCUCUG.................... len:22 al:43
..................................................cUUGAUUGUAGACAAGCCUCU..................... len:21 al:2
..................................................AUUGAUUGUAGACAAGCCaC...................... len:20 al:8
..................................................AUUGAUUGUAGACAAuCCUCUGAC.................. len:24 al:1
..................................................AUUGAUUGUAGACAAGCCgCU..................... len:21 al:8
..................................................AUUGAUUGUAGuCAAGCCUCUG.................... len:22 al:2
..................................................AUUGAUUGUAGACAAuCCUCUG.................... len:22 al:1
..................................................AUUGAUUGUAGACAAGCCUCcGA................... len:23 al:53
..................................................gUUGAUUGUAGACAAGCCUCUGACA................. len:25 al:1
..................................................AUUGAUUGUAGAuAAGCCUCUGA................... len:23 al:12
..................................................AUUGAUUGUAGACAAGCCcCUGA................... len:23 al:70
..................................................AUUGgUUGUAGACAAGCCUCUG.................... len:22 al:11
..................................................AUUGAUUGUAGACAAGC......................... len:17 al:4
..................................................AUUGAUUGUAGAuAAGCCUCU..................... len:21 al:2
..................................................AUUGAUUGUAGACAgGCCUCU..................... len:21 al:10
..................................................AUUGAUUGUAGACAgGCCU....................... len:19 al:2
..................................................AUUGAUUGUAGACAAGCCUCUcA................... len:23 al:8
..................................................AUUGAUUGUAGACAAaCCUCU..................... len:21 al:3
..................................................AUUGAUUGUAGACAAGCCUCUGACg................. len:25 al:7
..................................................AUUGgUUGUAGACAAGCCU....................... len:19 al:2
..................................................AUUGAUUGUAGuCAAGCCUCUGA................... len:23 al:2
..................................................AUUGAUUGUAGAuAAGCCUC...................... len:20 al:1
..................................................AUUGAUUGUAuACAAGCCUC...................... len:20 al:3
..................................................AUUGAUUGUgGACAAGCCUCUG.................... len:22 al:4
..................................................AUUGAUUGUAGACAAGCCUgUGA................... len:23 al:1
..................................................AUUGAUUGUAGACAAGCCUCUa.................... len:22 al:601
..................................................AUUGAUUGUAGACAAGCCUCUGACcA................ len:26 al:1
..................................................AUgGAUUGUAGACAAGCCU....................... len:19 al:1
..................................................AUUGAUUGUAGACAAGCCUuUG.................... len:22 al:2
..................................................AUUGAUUGUcGACAAGCCUCUGA................... len:23 al:2
..................................................AUUGAUUGUAGACuAGCCUC...................... len:20 al:3
..................................................AUUGAUUGUAGACAgGCCUCUGAC.................. len:24 al:6
..................................................AUUGAcUGUAGACAAGCCUC...................... len:20 al:7
..................................................AUUGAUUGUAGACAAGCaUCUGA................... len:23 al:4
..................................................AUUGAUUGUAGACAAGCCUCUGACAAa............... len:27 al:2
..................................................AUUGAUUGUAGACAAGCCUCUaA................... len:23 al:46
..................................................uUUGAUUGUAGACAAGCCUCUG.................... len:22 al:21
..................................................AUUGAUUGUAGACAcGCCUCUGA................... len:23 al:5
..................................................AUUGAUUGUAGACAAGCCaCU..................... len:21 al:5
..................................................AUUGAcUGUAGACAAGCCUCUGA................... len:23 al:28
..................................................AUUGAUUGUAGgCAAGCCUCU..................... len:21 al:6
..................................................AUUGAUUGUAaACAAGCCUC...................... len:20 al:1
..................................................AUUGAUUGUgGACAAGCCUCUGAC.................. len:24 al:1
..................................................AUUGAUUGcAGACAAGCCUC...................... len:20 al:7
..................................................AUUGAcUGUAGACAAGCCUCUGAC.................. len:24 al:5
..................................................AUUGAUUGUAGACAAGCCUCUG.................... len:22 al:2478
..................................................AUUGcUUGUAGACAAGCCUCU..................... len:21 al:4
..................................................AUUGAUUGUAGACAuGCCUCUG.................... len:22 al:1
..................................................AUcGAUUGUAGACAAGCCUCUGAC.................. len:24 al:2
..................................................uUUGAUUGUAGACAAGCCUCU..................... len:21 al:5
..................................................AUUGAUaGUAGACAAGCCU....................... len:19 al:1
..................................................AUUGAUcGUAGACAAGCCUC...................... len:20 al:2
..................................................AUUGAUUGcAGACAAGCCUCUGA................... len:23 al:31
..................................................AUUGAUUGUAaACAAGCCUCUG.................... len:22 al:2
..................................................AUUGAUUGUAGACAAGCCUCgGA................... len:23 al:5
..................................................AUUcAUUGUAGACAAGCCUCUGA................... len:23 al:2
..................................................uUUGAUUGUAGACAAGCCUCUGA................... len:23 al:49
..................................................AUUGgUUGUAGACAAGCCUCU..................... len:21 al:16
..................................................AUUGAUUGUAGACAAGCuUCUG.................... len:22 al:2
..................................................AUUGAUUGUAGACAAGCCUCUc.................... len:22 al:54
..................................................AUUGAUUGUAGACAAGCCUCUGAuAA................ len:26 al:60
..................................................AUUGAgUGUAGACAAGCCUC...................... len:20 al:1
..................................................AUUGAUUGUAGACAAGCCUC...................... len:20 al:1225
..................................................AUUGAUUGUAGACgAGCCUCUGA................... len:23 al:42
..................................................AUUGAUUGUAGACAAGCCUCUGuC.................. len:24 al:230
..................................................AUUGAUUGUAGACAAGCCUCUGACA................. len:25 al:88
..................................................AUUGAcUGUAGACAAGCCUCUGACA................. len:25 al:1
..................................................AUUGAUUGUAGACAAuCCUC...................... len:20 al:2
..................................................cUUGAUUGUAGACAAGCCUCUGAC.................. len:24 al:1
..................................................AUUGgUUGUAGACAAGCCUCUGA................... len:23 al:52
..................................................AUUGAUUGUAGACAAGuCUCU..................... len:21 al:4
..................................................AUUGAUUGUAGcCAAGCCUCUGA................... len:23 al:2
..................................................AUUGAUUGUAGACAAGCCUCUGu................... len:23 al:10304
..................................................AcUGAUUGUAGACAAGCCUCUG.................... len:22 al:9
..................................................AUUGAUUGUAGACAAGCaU....................... len:19 al:3
..................................................AaUGAUUGUAGACAAGCCUCUGA................... len:23 al:4
..................................................AUUGAUUGUAaACAAGCCUCUGA................... len:23 al:3
..................................................AUUGAUUGUAGACAAGaC........................ len:18 al:2
..................................................AUUGAUUGUAGACAAGCCcC...................... len:20 al:37
..................................................AUcGAUUGUAGACAAGCCUCUG.................... len:22 al:4
..................................................AUUcAUUGUAGACAAGCCUCU..................... len:21 al:1
..................................................AUUGAUUGUAaACAAGCCUCU..................... len:21 al:1
..................................................uUUGAUUGUAGACAAGCC........................ len:18 al:1
..................................................AUUGAUgGUAGACAAGCCUCUGA................... len:23 al:2
..................................................AUUGAUUGUAGACAAGCaUCUG.................... len:22 al:1
..................................................AUUGAUUGcAGACAAGCCU....................... len:19 al:1
..................................................AUUGAUUGUAGuCAAGCCUCU..................... len:21 al:3
..................................................AUUGAUUGcAGACAAGCCUCUGAC.................. len:24 al:4
..................................................AUUGAUUGUAGACAAGCCUCUGACAAaC.............. len:28 al:1
..................................................AUUGAUUaUAGACAAGCCUCUG.................... len:22 al:3
..................................................AUUGAUUGUAGcCAAGCCUCU..................... len:21 al:1
..................................................AUUGAUUGUAGACAAGCCcCUGAC.................. len:24 al:6
..................................................AUcGAUUGUAGACAAGCCUCUGA................... len:23 al:30
..................................................AUaGAUUGUAGACAAGCCUCUGA................... len:23 al:2
..................................................AUUGAUUGgAGACAAGCCUCU..................... len:21 al:1
..................................................AUUaAUUGUAGACAAGCCUCUG.................... len:22 al:1
..................................................AUUGAUcGUAGACAAGCCUCUGA................... len:23 al:51
..................................................AUUGAUUGUgGACAAGCCUCUGA................... len:23 al:43
..................................................AUUGAUUGUAGACAAGCCUCUGAg.................. len:24 al:62
..................................................AcUGAUUGUAGACAAGCCU....................... len:19 al:3
..................................................uUUGAUUGUAGACAAGCCUC...................... len:20 al:6
..................................................AUUGAUUGUAGACAAGCCUCg..................... len:21 al:109
..................................................AUUGAgUGUAGACAAGCCUCU..................... len:21 al:1
..................................................AUUcAUUGUAGACAAGCCUCUGAC.................. len:24 al:1
..................................................AUUGAUUGUAGuCAAGCCUC...................... len:20 al:1
..................................................AUUGAUUGUAGACAAGCCUCgG.................... len:22 al:6
..................................................AUUGAUUGUAGACAAGCCUCUGAu.................. len:24 al:6852
..................................................AcUGAUUGUAGACAAGCCUC...................... len:20 al:3
..................................................AUUGAUUGUAGACAAGCCUgU..................... len:21 al:6
..................................................AUUGAaUGUAGACAAGCCUC...................... len:20 al:1
..................................................AUUGAUUGUAGACAAGCCUCUGACu................. len:25 al:295
..................................................AUUGAUUGUAGACAAGCu........................ len:18 al:61
..................................................AUUGAUUGUAGACAAGuCUCUG.................... len:22 al:1
..................................................AUUGAUUuUAGACAAGCCUCUG.................... len:22 al:2
..................................................AUUGAUcGUAGACAAGCCU....................... len:19 al:2
..................................................AUUGAUUGUAGACAAaCCUCUG.................... len:22 al:2
..................................................AUUGAUUGUAGACAAGCCUCaGAC.................. len:24 al:1
..................................................AUUGAUUGUAGACAAGCCUuUGAC.................. len:24 al:1
..................................................gUUGAUUGUAGACAAGCCUCU..................... len:21 al:28
..................................................AUUGgUUGUAGACAAGCCUC...................... len:20 al:3
..................................................AUUGAUUGUAuACAAGCCUCUG.................... len:22 al:1
..................................................gUUGAUUGUAGACAAGCCUCUGA................... len:23 al:168
..................................................AUgGAUUGUAGACAAGCCUC...................... len:20 al:1
..................................................gUUGAUUGUAGACAAGCCU....................... len:19 al:6
..................................................AUUGAUUGUAGACAAGCCUCUGuCA................. len:25 al:8
..................................................AUUGAUUGUAGACAAuCCUCUGA................... len:23 al:4
..................................................gUUGAUUGUAGACAAGCCUCUGAC.................. len:24 al:15
..................................................AUUGAUUGUAGACAAGuCUC...................... len:20 al:1
..................................................AcUGAUUGUAGACAAGCCUCU..................... len:21 al:8
..................................................AUUGAUUGUAGACAgGCCUCUGA................... len:23 al:58
..................................................AUUGAUcGUAGACAAGCCUCUGAC.................. len:24 al:5
..................................................AUUGAUUGUAGACAAGCC........................ len:18 al:92
..................................................AUUGAUUGUAGgCAAGCCUC...................... len:20 al:10
..................................................AUUGAUUGaAGACAAGCCUCUGA................... len:23 al:3
..................................................AcUGAUUGUAGACAAGCCUCUGA................... len:23 al:44
..................................................AUUGuUUGUAGACAAGCCU....................... len:19 al:1
..................................................AUUGAUcGUAGACAAGCCUCUG.................... len:22 al:6
..................................................AUUGAUUGUAGACAAGCCUCUGAgA................. len:25 al:4
..................................................AUUGAUUGUAGgCAAGCCU....................... len:19 al:4
..................................................AUUGAUUGUAGACAAGCCUa...................... len:20 al:153
..................................................AUUGAUUaUAGACAAGCCUCUGAC.................. len:24 al:3
..................................................AUUGAUUGUAGACAAGCuUCUGAC.................. len:24 al:1
..................................................AUUGAUUGaAGACAAGCCUC...................... len:20 al:3
..................................................AUUGAUUGUAGACAAGuC........................ len:18 al:1
..................................................AUUGAaUGUAGACAAGCCUCUGA................... len:23 al:3
..................................................AUUGAUUGUAGACAAGCCUCcG.................... len:22 al:38
..................................................AUUGAUUGUAGACAAGCCUCU..................... len:21 al:2546
..................................................AUUGAUUGUAGACAAGCCaCUGA................... len:23 al:6
..................................................AUUGAUUaUAGACAAGCCUCU..................... len:21 al:1
..................................................AUcGAUUGUAGACAAGCCUC...................... len:20 al:3
..................................................AUUGAUUGUAGACAAGCCUCUGACuA................ len:26 al:1
..................................................AUUGAcUGUAGACAAGCCUCUG.................... len:22 al:2
..................................................AUUGAUUGUAGACAAGCCgCUGA................... len:23 al:2
..................................................AUUaAUUGUAGACAAGCCUCUGA................... len:23 al:4
..................................................AUUGAUUGUAGACAgGCCUCUG.................... len:22 al:7
..................................................AUUGAUUGUAGACAAGCCU....................... len:19 al:617
..................................................AUUGAUUGaAGACAAGCCUCUGAC.................. len:24 al:1
..................................................AUUGAUUGUAGACAAaCCUCUGAC.................. len:24 al:1
..................................................AUUGAUUGUAGACAAGCCUu...................... len:20 al:295
..................................................AUUGAUUGUAGACAAGCCUCUGc................... len:23 al:2081
..................................................AUUGAUUGUAGACAAuCCU....................... len:19 al:1
..................................................AUUGAUaGUAGACAAGCCUCUGA................... len:23 al:3
..................................................AUUGAUUGUAGACAAGCuU....................... len:19 al:3
..................................................AUUGAUUGUAGACAAGuCUCUGA................... len:23 al:18
..................................................AUUGAUUGUAGACAAGCCUCUGgCA................. len:25 al:1
..................................................AUcGAUUGUAGACAAGCCUCU..................... len:21 al:10
..................................................AUUGAUUGUAGACAAGuCUCUGAC.................. len:24 al:1
..................................................AUUGAUUGUAGACAAGCCUCcGAC.................. len:24 al:2
..................................................AUUGAUUGUAGACAAGCCUCUGcC.................. len:24 al:2
..................................................AUUGAUUuUAGACAAGCCUCUGA................... len:23 al:1
..................................................cUUGAUUGUAGACAAGCCUCUGA................... len:23 al:25
..................................................AUUGAUUGUAGACAAGCCUCaGA................... len:23 al:1
..................................................AUUGAUUGUAGgCAAGCCUCUGA................... len:23 al:64
..................................................AUUGAUUGUAGACAAGCCUCUGg................... len:23 al:390
..................................................AUUGAUUGUgGACAAGCCUCU..................... len:21 al:4
..................................................AUUGAUaGUAGACAAGCCUCU..................... len:21 al:1
..................................................gUUGAUUGUAGACAAGCCUC...................... len:20 al:14
..................................................AUUGuUUGUAGACAAGCCUCUGA................... len:23 al:4
..................................................AUUGAUUGUAGACAAG.......................... len:16 al:2
..................................................AUUGAUUGcAGACAAGCCUCU..................... len:21 al:5
..................................................AUUGAUUGUAGACAAGCCUCUGAaAA................ len:26 al:13
..................................................AUUGAUUGUAGACAAGCCUCUGAaA................. len:25 al:85
..................................................AUUGAUUGcAGACAAGCCUCUG.................... len:22 al:2
..................................................AUUGAUUGUAGACAAGCCUuU..................... len:21 al:5
..................................................AUUGAUUGUAGAuAAGCCUCUG.................... len:22 al:1
..................................................AUUGAUUGUAGACAAGCCgC...................... len:20 al:7
..................................................AUUGAUUGUAGACAgGCC........................ len:18 al:1
..................................................AUUGgUUGUAGACAAGCCUCUGAC.................. len:24 al:10
..................................................AUUGAgUGUAGACAAGCCU....................... len:19 al:2
..................................................AUUGgUUGUAGACAAGCCUCUGACA................. len:25 al:1
..................................................AUUGAUUGUAGACAAGCCUCUuA................... len:23 al:14
..................................................AUUGAUUGUAGACAAGCCUCUGAuA................. len:25 al:2380
..................................................cUUGAUUGUAGACAAGCCUC...................... len:20 al:2
..................................................AUUGAUUGUAGACAAGCCUCaG.................... len:22 al:2
..................................................AUUGAUUGUAGAuAAGCCUCUGAC.................. len:24 al:1
..................................................AcUGAUUGUAGACAAGCCUCUGAC.................. len:24 al:1
..................................................AUUGAUUGUAGACAAGCCUCUGAa.................. len:24 al:370
..................................................AUUGAUUGUAGACAAGCCaCUGAC.................. len:24 al:2
..................................................AUUGAUUaUAGACAAGCCUCUGA................... len:23 al:7
..................................................AUUGAUUGUcGACAAGCCUCUG.................... len:22 al:1
..................................................AUUGAUUGUAGACAAGCCUCcGACA................. len:25 al:2
..................................................AUUGAUUGUAGACAAGCCc....................... len:19 al:124
..................................................AUUGAUUGUAGACgAGCCUCU..................... len:21 al:14
..................................................AUUGAUUGUAGACuAGCCUCUGAC.................. len:24 al:1
..................................................AUUGAUUGUgGACAAGCCU....................... len:19 al:2
..................................................cUUGAUUGUAGACAAGCCUCUG.................... len:22 al:6
..................................................AUUGAUUGUAGACAAGgCU....................... len:19 al:1
..................................................AUUGAUUGUAGACAAGCuUCU..................... len:21 al:3
..................................................AUUGAcUGUAGACAAGCCUCU..................... len:21 al:11
..................................................uUUGAUUGUAGACAAGCCU....................... len:19 al:1
..................................................AUUGAUUGUAGACAAGCCUaU..................... len:21 al:13
..................................................AUUGAUUGUAGACAAGCCUCUGgC.................. len:24 al:21
..................................................AUUGAUUGUAGACAAGCCUCUGA................... len:23 al:12975
..................................................AUUGAUUGUAGACuAGCCUCUG.................... len:22 al:1
..................................................AUUGAUUGUAGgCAAGCCUCUGAC.................. len:24 al:5
..................................................AUUGAUUGUAGACAAGCCa....................... len:19 al:179
..................................................AUUGAUUGUAGgCAAGCCUCUG.................... len:22 al:8
..................................................AUUGAUUGUAGACuAGCCUCUGA................... len:23 al:2
..................................................AUUGAUUGUAGACAAGCaUCUGAC.................. len:24 al:1
..................................................AUUGAUUGUAGACAAGCCUCc..................... len:21 al:504
..................................................AUUGAUUGUuGACAAGCCUCUGA................... len:23 al:4
..................................................AUUGAUUaUAGACAAGCCU....................... len:19 al:1
..................................................AUUGAUUGUAGACAAGCCUCUu.................... len:22 al:130
..................................................AUUGAUUGUAGACAAGCCUCa..................... len:21 al:473
..................................................AUUGAUUGUAGACAAGCCcCUG.................... len:22 al:14
..................................................gUUGAUUGUAGACAAGCC........................ len:18 al:2
..................................................AUUGAUUGUAGcCAAGCCUCUG.................... len:22 al:2
..................................................AUUGAUUGUAGACAAGCCUg...................... len:20 al:9
..................................................AUUGAUUGUAGACAAGCCUCUGAC.................. len:24 al:1029
..................................................AUUGAUUGUAGACAAGCCg....................... len:19 al:26
..................................................AUUGAUUcUAGACAAGCCUCUGA................... len:23 al:1
..................................................uUUGAUUGUAGACAAGCCUCUGAC.................. len:24 al:1
..................................................AUUGAUUGUAGAaAAGCCUCU..................... len:21 al:1
..................................................AUaGAUUGUAGACAAGCCUCU..................... len:21 al:1
..................................................AUUGAUUGUAuACAAGCCUCU..................... len:21 al:1
..................................................AUUGAUUGUAGACAgGCCUC...................... len:20 al:3
..................................................AUUGAUUGUAGACgAGCCUCUG.................... len:22 al:15
..................................................AUUGAUUGUAGACAAGCa........................ len:18 al:44
..................................................AUUGAUUGUAGAaAAGCCUCUGA................... len:23 al:3
..................................................AUUGAUUGUAGACAAaCCUCUGA................... len:23 al:5
..................................................AUUGAUUGUAGACAAGCCUCUaAC.................. len:24 al:6
..................................................AUUGAUUGUAGACAAGCCUaUG.................... len:22 al:3
..................................................AUUGAUcGUAGACAAGCCUCU..................... len:21 al:10
..................................................AUcGAUUGUAGACAAGCCU....................... len:19 al:1
..................................................AUUGAUUaUAGACAAGCCUC...................... len:20 al:1
...................................................UUGAUUGUAGACAAGCCUCUGA................... len:22 al:21
...................................................UUGAUUGUAGACAAGCCUCc..................... len:20 al:2
...................................................UUGAUUGUAGACAAGCCUCUGu................... len:22 al:34
...................................................UUGAUUGUAGACAAGCCUCUGAaA................. len:24 al:1
...................................................UUGAUUGUAGACAAGCCUCUGAuA................. len:24 al:14
...................................................UUGAUUGUAGACAAGCCUC...................... len:19 al:7
...................................................UUGAUUGUAGACAAGCCUCUGc................... len:22 al:3
...................................................aUGAUUGUAGACAAGCCUCUGA................... len:22 al:3
...................................................UUGAUUGUAGACAAGCCUCUGAu.................. len:23 al:15
...................................................UUGAUUGUAGACgAGCCUCUG.................... len:21 al:1
...................................................UUGAUUGUAGACAAGCCUCUGACu................. len:24 al:1
...................................................UUGAUUGUAGACAAGCCU....................... len:18 al:1
...................................................UUGAUUGUAGACAAGCCUCUG.................... len:21 al:9
...................................................UUGAUUGUAGACAAGCCUCUc.................... len:21 al:2
...................................................UUGAUUGUAGACAAGCCUCUa.................... len:21 al:7
...................................................UUGAUUGUAGACAAGCCUCa..................... len:20 al:3
...................................................UUGAUUGUAGACAAGCCUCUGAC.................. len:23 al:5
...................................................UUGgUUGUAGACAAGCCUC...................... len:19 al:1
...................................................UUGAUUGUAGACAAGCCUCUGAa.................. len:23 al:1
...................................................cUGAUUGUAGACAAGCCUCUG.................... len:21 al:1
...................................................UUGAUUGUAGACAAGCCUCU..................... len:20 al:8
...................................................UUGAUUGUAGACAAGCCa....................... len:18 al:1
...................................................UUGAUUGUAGACAAGCCcCUGA................... len:22 al:1
...................................................UUGAUUGUAGACAAGCCUCUGuC.................. len:23 al:1
....................................................UGAUUGUAGACAAGCCUCUGuC.................. len:22 al:1
....................................................UGAUUGUAGACAAGCCUCUGu................... len:21 al:7
....................................................UGAUUGUAGACAAGCCUC...................... len:18 al:5
....................................................UGAUUGUAGACAAGCCUaU..................... len:19 al:1
....................................................UGAUUGUAGACAAGCCUCUGAu.................. len:22 al:4
....................................................UGAUUGUAGACAAGCCUCUGAC.................. len:22 al:1
....................................................UGAUUGUAGACAAGCCUa...................... len:18 al:3
....................................................UGAUUGUAGACAAGCCUCc..................... len:19 al:3
....................................................UGAUUGUAGACAAGCCUCUG.................... len:20 al:5
....................................................UGAUUGUAGACAAGCCUCUa.................... len:20 al:2
....................................................UGAUUGUgGACAAGCCUCUGA................... len:21 al:1
....................................................UGAUUGUAGACAAGCCcCU..................... len:19 al:2
....................................................UGAUUGUAGACAAGCCUCUGc................... len:21 al:4
....................................................UGAUUGUAGACAAGCCUu...................... len:18 al:2
....................................................UGAUUGUAGgCAAGCCUCUGA................... len:21 al:2
....................................................UGAUUGUAGACAAGCCUCUGA................... len:21 al:20
....................................................UGAUUGUAGACAAGCCUCUGAuA................. len:23 al:2
....................................................UGAUUGUAGACAAGCCUCU..................... len:19 al:15
.....................................................GAUUGUAGACAAGCCUCUGAu.................. len:21 al:1
.....................................................GAUUGUAGACAAGCCUCU..................... len:18 al:3
.....................................................GAUUGUAGACAAGCCUCUGu................... len:20 al:1
.....................................................GAUUGUAGACAAGCCUCa..................... len:18 al:1
.....................................................GAUUGUAGACAAGCCcCU..................... len:18 al:1
.....................................................GAUUGUAGACAAGCCUCg..................... len:18 al:1
......................................................AUUGUAGACAAGCCUCUGA................... len:19 al:2
.......................................................UUGUAGACAAGCCUCUGu................... len:18 al:1