36747760 reads; of these: 36747760 (100.00%) were paired; of these: 18186879 (49.49%) aligned concordantly 0 times 17449418 (47.48%) aligned concordantly exactly 1 time 1111463 (3.02%) aligned concordantly >1 times ---- 18186879 pairs aligned concordantly 0 times; of these: 660962 (3.63%) aligned discordantly 1 time ---- 17525917 pairs aligned 0 times concordantly or discordantly; of these: 35051834 mates make up the pairs; of these: 26459558 (75.49%) aligned 0 times 7725354 (22.04%) aligned exactly 1 time 866922 (2.47%) aligned >1 times 64.00% overall alignment rate Warning: [Errno 2] No such file or directory: '/home/shared/8TB_HDD_02/mewing0/clamgonads-macsamples/data/raw/M-C-193_R2_001.fastq.gz_R1_001.fastq.gz' (ERR): Read file '/home/shared/8TB_HDD_02/mewing0/clamgonads-macsamples/data/raw/M-C-193_R2_001.fastq.gz_R1_001.fastq.gz' doesn't exist Exiting now ...