Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content M-C-216_R1_001 M-C-216_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34443939.0 5.1 Gbp 0.0 150.0 33.0 38.89650790006632 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-216_R2_001 M-C-216_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34443939.0 5.1 Gbp 0.0 150.0 33.0 38.04093786139039 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-218_R1_001 M-C-218_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33910129.0 5 Gbp 0.0 150.0 32.0 35.43169134786236 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-218_R2_001 M-C-218_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33910129.0 5 Gbp 0.0 150.0 32.0 35.1027193841162 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-226_R1_001 M-C-226_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 47981112.0 7.1 Gbp 0.0 150.0 34.0 34.94959416703669 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-226_R2_001 M-C-226_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 47981112.0 7.1 Gbp 0.0 150.0 34.0 35.82901707182087 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-306_R1_001 M-C-306_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34922791.0 5.2 Gbp 0.0 150.0 34.0 36.03590728998795 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-306_R2_001 M-C-306_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34922791.0 5.2 Gbp 0.0 150.0 34.0 36.228101488469015 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-329_R1_001 M-C-329_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35127753.0 5.2 Gbp 0.0 150.0 33.0 34.28399338751344 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-329_R2_001 M-C-329_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35127753.0 5.2 Gbp 0.0 150.0 33.0 34.630117004754766 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-334_R1_001 M-C-334_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31972026.0 4.7 Gbp 0.0 150.0 34.0 38.45157093172525 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-334_R2_001 M-C-334_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31972026.0 4.7 Gbp 0.0 150.0 34.0 38.56351851269529 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-337_R1_001 M-C-337_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37007223.0 5.5 Gbp 0.0 150.0 34.0 38.96259519842465 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-337_R2_001 M-C-337_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37007223.0 5.5 Gbp 0.0 150.0 34.0 38.25017903566841 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-339_R1_001 M-C-339_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31126207.0 4.6 Gbp 0.0 150.0 34.0 43.65423622140145 150.0 pass pass pass pass fail warn pass pass fail warn warn M-C-339_R2_001 M-C-339_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31126207.0 4.6 Gbp 0.0 150.0 35.0 43.388418600724734 150.0 pass pass warn pass fail warn pass pass fail warn warn M-C-358_R1_001 M-C-358_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34184751.0 5.1 Gbp 0.0 150.0 33.0 38.91955471326021 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-358_R2_001 M-C-358_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34184751.0 5.1 Gbp 0.0 150.0 33.0 39.00635764568252 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-360_R1_001 M-C-360_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 49513392.0 7.4 Gbp 0.0 150.0 33.0 37.1862709480249 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-360_R2_001 M-C-360_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 49513392.0 7.4 Gbp 0.0 150.0 33.0 37.79670695444942 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-363_R1_001 M-C-363_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37249221.0 5.5 Gbp 0.0 150.0 32.0 36.69413275008929 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-363_R2_001 M-C-363_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37249221.0 5.5 Gbp 0.0 150.0 33.0 36.44294579657784 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-373_R1_001 M-C-373_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35927901.0 5.3 Gbp 0.0 150.0 33.0 38.32870180939016 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-373_R2_001 M-C-373_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35927901.0 5.3 Gbp 0.0 150.0 33.0 37.74478064195619 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-482_R1_001 M-C-482_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33365530.0 5 Gbp 0.0 150.0 33.0 37.411601791346996 150.0 pass pass pass pass fail fail pass pass fail warn warn M-C-482_R2_001 M-C-482_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33365530.0 5 Gbp 0.0 150.0 33.0 37.46482043771881 150.0 pass pass warn pass fail fail pass pass fail warn warn M-C-488_R1_001 M-C-488_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33853156.0 5 Gbp 0.0 150.0 33.0 38.99971974935463 150.0 pass pass pass pass fail warn pass pass fail warn warn M-C-488_R2_001 M-C-488_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33853156.0 5 Gbp 0.0 150.0 33.0 38.590944751830264 150.0 pass pass warn pass fail warn pass pass fail warn warn M-T-18_R1_001 M-T-18_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33236212.0 4.9 Gbp 0.0 150.0 34.0 43.47268757767393 150.0 pass pass pass pass fail pass pass pass fail warn warn M-T-18_R2_001 M-T-18_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33236212.0 4.9 Gbp 0.0 150.0 34.0 43.692111979264084 150.0 pass pass warn pass fail warn pass pass fail warn warn M-T-193_R1_001 M-T-193_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36747760.0 5.5 Gbp 0.0 150.0 33.0 39.8135300452324 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-193_R2_001 M-T-193_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36747760.0 5.5 Gbp 0.0 150.0 33.0 38.73682739784622 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-20_R1_001 M-T-20_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37411320.0 5.6 Gbp 0.0 150.0 33.0 40.26525094579485 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-20_R2_001 M-T-20_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37411320.0 5.6 Gbp 0.0 150.0 33.0 40.296521342849914 150.0 pass pass warn pass fail warn pass pass fail warn warn M-T-22_R1_001 M-T-22_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33527679.0 5 Gbp 0.0 150.0 33.0 40.964253974597256 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-22_R2_001 M-T-22_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33527679.0 5 Gbp 0.0 150.0 33.0 41.67290678868075 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-235_R1_001 M-T-235_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35966847.0 5.3 Gbp 0.0 150.0 33.0 34.091126520242966 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-235_R2_001 M-T-235_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35966847.0 5.3 Gbp 0.0 150.0 33.0 33.97541897324696 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-245_R1_001 M-T-245_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29909520.0 4.4 Gbp 0.0 150.0 33.0 35.2689973692647 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-245_R2_001 M-T-245_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29909520.0 4.4 Gbp 0.0 150.0 34.0 35.09634351560811 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-29_R1_001 M-T-29_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36176060.0 5.4 Gbp 0.0 150.0 33.0 38.59986015548033 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-29_R2_001 M-T-29_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36176060.0 5.4 Gbp 0.0 150.0 33.0 38.44795156626726 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-31_R1_001 M-T-31_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31829493.0 4.7 Gbp 0.0 150.0 33.0 41.90413090894852 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-31_R2_001 M-T-31_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31829493.0 4.7 Gbp 0.0 150.0 34.0 42.95639989763319 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-32_R1_001 M-T-32_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37915821.0 5.6 Gbp 0.0 150.0 33.0 43.39950151560594 150.0 pass pass pass pass fail warn pass pass fail warn warn M-T-32_R2_001 M-T-32_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37915821.0 5.6 Gbp 0.0 150.0 33.0 43.86191972330262 150.0 pass pass warn pass fail warn pass pass fail warn warn M-T-399_R1_001 M-T-399_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39457912.0 5.9 Gbp 0.0 150.0 33.0 39.2392030541091 150.0 pass pass pass pass fail pass pass pass fail warn warn M-T-399_R2_001 M-T-399_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39457912.0 5.9 Gbp 0.0 150.0 33.0 38.544661415485834 150.0 pass pass warn pass fail pass pass pass fail warn warn M-T-43_R1_001 M-T-43_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 50292908.0 7.5 Gbp 0.0 150.0 33.0 36.40708612678602 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-43_R2_001 M-T-43_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 50292908.0 7.5 Gbp 0.0 150.0 33.0 36.75546315000261 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-44_R1_001 M-T-44_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36464096.0 5.4 Gbp 0.0 150.0 33.0 41.24241212036152 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-44_R2_001 M-T-44_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36464096.0 5.4 Gbp 0.0 150.0 33.0 40.34019105198889 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-500_R1_001 M-T-500_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37240310.0 5.5 Gbp 0.0 150.0 33.0 39.125080370000234 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-500_R2_001 M-T-500_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37240310.0 5.5 Gbp 0.0 150.0 33.0 37.882142084176934 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-7_R1_001 M-T-7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42197219.0 6.3 Gbp 0.0 150.0 33.0 39.93542485328615 150.0 pass pass pass pass fail pass pass pass fail warn warn M-T-7_R2_001 M-T-7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42197219.0 6.3 Gbp 0.0 150.0 34.0 41.40646927125138 150.0 pass pass warn pass fail pass pass pass fail warn warn M-T-83_R1_001 M-T-83_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38162689.0 5.7 Gbp 0.0 150.0 33.0 38.41179095221015 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-83_R2_001 M-T-83_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38162689.0 5.7 Gbp 0.0 150.0 33.0 37.20670105009638 150.0 pass pass warn pass fail fail pass pass fail warn warn M-T-8_R1_001 M-T-8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 32525548.0 4.8 Gbp 0.0 150.0 33.0 40.17992703410558 150.0 pass pass pass pass fail fail pass pass fail warn warn M-T-8_R2_001 M-T-8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 32525548.0 4.8 Gbp 0.0 150.0 33.0 41.574993176534605 150.0 pass pass warn pass fail fail pass pass fail warn warn