Bismark report for: ../../data/EF04-EM05-Larvae_R1_001.fastp-trim.20220827.fq.gz and ../../data/EF04-EM05-Larvae_R2_001.fastp-trim.20220827.fq.gz (version: v0.24.2)
Bismark was run with Bowtie 2 against the bisulfite genome of /mmfs1/gscratch/scrubbed/sr320/github/ceasmallr/data/genome/ with the specified options: -q --score-min L,0,-0.8 -p 8 --reorder --ignore-quals --no-mixed --no-discordant --dovetail --maxins 500
Option '--non_directional' specified: alignments to all strands were being performed (OT, OB, CTOT, CTOB)