EF07-EM01-Zygote_R1_001.fastp-trim.20220827_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 11292660 lines in total Total number of methylation call strings processed: 22585320 Final Cytosine Methylation Report ================================= Total number of C's analysed: 163954930 Total methylated C's in CpG context: 3077697 Total methylated C's in CHG context: 602287 Total methylated C's in CHH context: 4577494 Total C to T conversions in CpG context: 16880960 Total C to T conversions in CHG context: 29060706 Total C to T conversions in CHH context: 109755786 C methylated in CpG context: 15.4% C methylated in CHG context: 2.0% C methylated in CHH context: 4.0%