CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 55704 143338 27.99 199042 2 60205 213392 22.00 273597 3 37877 272070 12.22 309947 4 31301 225256 12.20 256557 5 36995 249463 12.91 286458 6 23628 174908 11.90 198536 7 26300 166936 13.61 193236 8 31619 182827 14.74 214446 9 32849 178174 15.57 211023 10 30458 170592 15.15 201050 11 33816 172217 16.41 206033 12 36415 170633 17.59 207048 13 33809 169064 16.67 202873 14 31624 166581 15.96 198205 15 31633 165644 16.03 197277 16 30595 164847 15.65 195442 17 30973 165413 15.77 196386 18 30296 169434 15.17 199730 19 30599 169271 15.31 199870 20 32752 177775 15.56 210527 21 33534 180074 15.70 213608 22 35169 181403 16.24 216572 23 33670 181280 15.66 214950 24 33521 182142 15.54 215663 25 33036 178488 15.62 211524 26 32724 174438 15.80 207162 27 32159 174636 15.55 206795 28 31950 173535 15.55 205485 29 32547 173208 15.82 205755 30 33334 177336 15.82 210670 31 32217 179162 15.24 211379 32 32085 176560 15.38 208645 33 32220 175434 15.52 207654 34 32400 175795 15.56 208195 35 32397 174980 15.62 207377 36 31806 174852 15.39 206658 37 31596 174625 15.32 206221 38 31626 173732 15.40 205358 39 31556 173088 15.42 204644 40 30741 170901 15.25 201642 41 31723 169396 15.77 201119 42 31209 170099 15.50 201308 43 31176 169555 15.53 200731 44 32416 169662 16.04 202078 45 30674 168340 15.41 199014 46 29822 165353 15.28 195175 47 29725 163627 15.37 193352 48 29194 162460 15.23 191654 49 29325 161815 15.34 191140 50 29199 159433 15.48 188632 51 28774 158709 15.35 187483 52 28013 155984 15.22 183997 53 27727 153007 15.34 180734 54 27379 153179 15.16 180558 55 27197 149980 15.35 177177 56 26812 148538 15.29 175350 57 26662 147044 15.35 173706 58 26047 145911 15.15 171958 59 25717 142940 15.25 168657 60 25166 141797 15.07 166963 61 24608 138167 15.12 162775 62 24162 136156 15.07 160318 63 23843 134373 15.07 158216 64 23777 131608 15.30 155385 65 23305 129738 15.23 153043 66 23276 128567 15.33 151843 67 23390 126931 15.56 150321 68 22258 124806 15.13 147064 69 22115 122074 15.34 144189 70 21336 119675 15.13 141011 71 20931 116658 15.21 137589 72 20585 115360 15.14 135945 73 19913 112978 14.98 132891 74 19748 110489 15.16 130237 75 19460 108493 15.21 127953 76 18937 106465 15.10 125402 77 18319 103083 15.09 121402 78 18022 100995 15.14 119017 79 17716 99226 15.15 116942 80 17172 96643 15.09 113815 81 17005 95807 15.07 112812 82 16660 93357 15.14 110017 83 16721 92001 15.38 108722 84 16110 90231 15.15 106341 85 15773 88006 15.20 103779 86 15126 85503 15.03 100629 87 14978 83939 15.14 98917 88 14838 82401 15.26 97239 89 14520 81025 15.20 95545 90 13920 79882 14.84 93802 91 13841 77180 15.21 91021 92 13426 75707 15.06 89133 93 13334 74188 15.24 87522 94 12654 71253 15.08 83907 95 12192 69146 14.99 81338 96 11923 68163 14.89 80086 97 11644 65924 15.01 77568 98 11482 64809 15.05 76291 99 11148 63452 14.94 74600 100 10892 61935 14.96 72827 101 10848 60828 15.13 71676 102 10439 59434 14.94 69873 103 10370 57946 15.18 68316 104 9850 56225 14.91 66075 105 9913 55475 15.16 65388 106 9644 53818 15.20 63462 107 9372 51859 15.31 61231 108 8765 51441 14.56 60206 109 8810 49722 15.05 58532 110 8707 48798 15.14 57505 111 8182 47697 14.64 55879 112 8249 46448 15.08 54697 113 7923 45344 14.87 53267 114 7931 44254 15.20 52185 115 7828 43295 15.31 51123 116 7410 42276 14.91 49686 117 7296 41584 14.93 48880 118 7094 40113 15.03 47207 119 6928 39288 14.99 46216 120 6812 38284 15.11 45096 121 6462 37217 14.79 43679 122 6479 36483 15.08 42962 123 6192 35383 14.89 41575 124 6247 34825 15.21 41072 125 6189 34306 15.28 40495 126 5888 33033 15.13 38921 127 5696 32558 14.89 38254 128 5573 31443 15.06 37016 129 5462 30695 15.11 36157 130 5383 29731 15.33 35114 131 5241 29593 15.05 34834 132 5050 28686 14.97 33736 133 4838 27920 14.77 32758 134 4746 27099 14.90 31845 135 4743 26683 15.09 31426 136 4665 25776 15.32 30441 137 4631 25203 15.52 29834 138 4359 24681 15.01 29040 139 4240 24335 14.84 28575 140 4139 23649 14.89 27788 141 3877 22886 14.49 26763 142 3986 22403 15.10 26389 143 3688 21768 14.49 25456 144 3877 21589 15.22 25466 145 3666 20692 15.05 24358 146 3579 20536 14.84 24115 147 3515 20500 14.64 24015 148 3466 19908 14.83 23374 149 3269 19241 14.52 22510 150 3269 18781 14.83 22050 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 80372 678693 10.59 759065 2 56066 212815 20.85 268881 3 41873 317242 11.66 359115 4 17896 294463 5.73 312359 5 8457 355674 2.32 364131 6 5358 410941 1.29 416299 7 4512 301030 1.48 305542 8 4444 306921 1.43 311365 9 4097 302212 1.34 306309 10 4910 287644 1.68 292554 11 7042 281930 2.44 288972 12 3652 293903 1.23 297555 13 3544 294734 1.19 298278 14 3057 286421 1.06 289478 15 3090 280819 1.09 283909 16 3531 280662 1.24 284193 17 2782 288398 0.96 291180 18 2751 292521 0.93 295272 19 2818 293375 0.95 296193 20 2813 297808 0.94 300621 21 2885 303564 0.94 306449 22 2752 307520 0.89 310272 23 2761 303625 0.90 306386 24 2736 298222 0.91 300958 25 2836 301357 0.93 304193 26 2735 295388 0.92 298123 27 2796 295299 0.94 298095 28 2942 299269 0.97 302211 29 2947 301747 0.97 304694 30 2990 304536 0.97 307526 31 3142 304886 1.02 308028 32 2916 302562 0.95 305478 33 3031 307278 0.98 310309 34 3024 302512 0.99 305536 35 2966 300970 0.98 303936 36 3051 299034 1.01 302085 37 3044 305224 0.99 308268 38 2965 299659 0.98 302624 39 2994 303456 0.98 306450 40 2917 294627 0.98 297544 41 3081 296111 1.03 299192 42 2967 294258 1.00 297225 43 3057 295795 1.02 298852 44 3094 287464 1.06 290558 45 3162 292598 1.07 295760 46 3135 286194 1.08 289329 47 3189 283412 1.11 286601 48 3231 279882 1.14 283113 49 3322 280209 1.17 283531 50 3401 275348 1.22 278749 51 3514 273389 1.27 276903 52 3307 268548 1.22 271855 53 3506 268776 1.29 272282 54 3364 262804 1.26 266168 55 3540 262569 1.33 266109 56 3497 257646 1.34 261143 57 3616 257638 1.38 261254 58 3536 251184 1.39 254720 59 3507 247143 1.40 250650 60 3575 244855 1.44 248430 61 3537 243708 1.43 247245 62 3378 235782 1.41 239160 63 3524 233216 1.49 236740 64 3424 229631 1.47 233055 65 3395 227547 1.47 230942 66 3401 223651 1.50 227052 67 3333 222653 1.47 225986 68 3390 217459 1.53 220849 69 3406 213244 1.57 216650 70 3376 207854 1.60 211230 71 3285 203812 1.59 207097 72 3278 197840 1.63 201118 73 3343 196866 1.67 200209 74 3196 190846 1.65 194042 75 3079 188774 1.60 191853 76 3154 185588 1.67 188742 77 3148 180125 1.72 183273 78 3112 175832 1.74 178944 79 3028 172922 1.72 175950 80 2941 167358 1.73 170299 81 2973 165294 1.77 168267 82 2922 161150 1.78 164072 83 2930 157058 1.83 159988 84 2762 154003 1.76 156765 85 2764 150902 1.80 153666 86 2647 146640 1.77 149287 87 2623 144001 1.79 146624 88 2580 141437 1.79 144017 89 2495 137526 1.78 140021 90 2575 135286 1.87 137861 91 2470 130944 1.85 133414 92 2407 128233 1.84 130640 93 2389 124705 1.88 127094 94 2344 122639 1.88 124983 95 2309 118823 1.91 121132 96 2270 115435 1.93 117705 97 2259 113566 1.95 115825 98 2207 109586 1.97 111793 99 2139 108069 1.94 110208 100 2091 105757 1.94 107848 101 2005 103190 1.91 105195 102 1979 101876 1.91 103855 103 2022 97803 2.03 99825 104 1875 94795 1.94 96670 105 1940 93053 2.04 94993 106 1815 90221 1.97 92036 107 1949 88221 2.16 90170 108 1762 85792 2.01 87554 109 1761 84473 2.04 86234 110 1778 81409 2.14 83187 111 1723 80956 2.08 82679 112 1654 79052 2.05 80706 113 1660 76421 2.13 78081 114 1505 74707 1.97 76212 115 1479 72373 2.00 73852 116 1450 70801 2.01 72251 117 1431 69649 2.01 71080 118 1408 67356 2.05 68764 119 1468 66256 2.17 67724 120 1381 64353 2.10 65734 121 1357 63080 2.11 64437 122 1284 61332 2.05 62616 123 1323 59782 2.17 61105 124 1320 57781 2.23 59101 125 1231 57301 2.10 58532 126 1134 55147 2.01 56281 127 1123 54475 2.02 55598 128 1077 53187 1.98 54264 129 1153 52191 2.16 53344 130 1112 50058 2.17 51170 131 1097 49295 2.18 50392 132 1022 48305 2.07 49327 133 1050 46959 2.19 48009 134 1012 45584 2.17 46596 135 1019 44369 2.25 45388 136 930 43776 2.08 44706 137 932 42843 2.13 43775 138 886 41606 2.09 42492 139 935 41059 2.23 41994 140 862 39319 2.15 40181 141 849 38692 2.15 39541 142 860 37155 2.26 38015 143 799 36420 2.15 37219 144 811 35535 2.23 36346 145 703 35103 1.96 35806 146 744 34636 2.10 35380 147 770 33689 2.23 34459 148 790 32918 2.34 33708 149 796 32503 2.39 33299 150 703 31733 2.17 32436 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 255499 628664 28.90 884163 2 231795 888378 20.69 1120173 3 168179 898831 15.76 1067010 4 110995 929419 10.67 1040414 5 74997 1064402 6.58 1139399 6 61303 1152707 5.05 1214010 7 64591 1303372 4.72 1367963 8 58690 1311681 4.28 1370371 9 59043 1221120 4.61 1280163 10 54073 1194191 4.33 1248264 11 62577 1175785 5.05 1238362 12 53314 1178286 4.33 1231600 13 56885 1187078 4.57 1243963 14 53245 1176674 4.33 1229919 15 59498 1166780 4.85 1226278 16 54371 1160881 4.47 1215252 17 56624 1145110 4.71 1201734 18 50614 1146493 4.23 1197107 19 58355 1142495 4.86 1200850 20 53350 1162077 4.39 1215427 21 55992 1145881 4.66 1201873 22 51905 1159318 4.29 1211223 23 56879 1157404 4.68 1214283 24 48681 1156524 4.04 1205205 25 54805 1170462 4.47 1225267 26 50031 1177202 4.08 1227233 27 53464 1186067 4.31 1239531 28 48025 1207194 3.83 1255219 29 52002 1198712 4.16 1250714 30 46621 1202094 3.73 1248715 31 51179 1186532 4.13 1237711 32 44939 1181608 3.66 1226547 33 46913 1179077 3.83 1225990 34 42818 1177584 3.51 1220402 35 46075 1172269 3.78 1218344 36 38625 1173171 3.19 1211796 37 42013 1174437 3.45 1216450 38 37755 1165983 3.14 1203738 39 40352 1152489 3.38 1192841 40 34880 1144356 2.96 1179236 41 38294 1150200 3.22 1188494 42 33384 1140092 2.84 1173476 43 37435 1132646 3.20 1170081 44 33114 1130766 2.85 1163880 45 35105 1121380 3.04 1156485 46 32265 1114920 2.81 1147185 47 35330 1109670 3.09 1145000 48 30521 1095113 2.71 1125634 49 32803 1085963 2.93 1118766 50 30381 1082132 2.73 1112513 51 32504 1068366 2.95 1100870 52 29049 1055663 2.68 1084712 53 30652 1042984 2.85 1073636 54 28905 1028087 2.73 1056992 55 30371 1014833 2.91 1045204 56 27395 1004963 2.65 1032358 57 27932 986922 2.75 1014854 58 26524 974991 2.65 1001515 59 28169 960104 2.85 988273 60 24664 941244 2.55 965908 61 25373 924429 2.67 949802 62 24632 912427 2.63 937059 63 24824 891573 2.71 916397 64 23302 877023 2.59 900325 65 24013 861771 2.71 885784 66 22293 848956 2.56 871249 67 22827 838962 2.65 861789 68 21044 819534 2.50 840578 69 21090 809556 2.54 830646 70 20129 794923 2.47 815052 71 20872 774535 2.62 795407 72 19280 763695 2.46 782975 73 19191 750365 2.49 769556 74 18522 740383 2.44 758905 75 18729 719062 2.54 737791 76 17375 701468 2.42 718843 77 17373 689024 2.46 706397 78 16752 678624 2.41 695376 79 17104 663153 2.51 680257 80 15874 647614 2.39 663488 81 15953 631990 2.46 647943 82 15080 618897 2.38 633977 83 15716 602958 2.54 618674 84 14190 590413 2.35 604603 85 14407 574386 2.45 588793 86 14034 563014 2.43 577048 87 13812 548559 2.46 562371 88 13011 538398 2.36 551409 89 13078 526105 2.43 539183 90 12442 511047 2.38 523489 91 12550 501661 2.44 514211 92 12090 490675 2.40 502765 93 11902 478288 2.43 490190 94 11487 469857 2.39 481344 95 11611 458135 2.47 469746 96 10903 449513 2.37 460416 97 10916 439426 2.42 450342 98 10360 427335 2.37 437695 99 10546 415959 2.47 426505 100 10004 405789 2.41 415793 101 9864 396471 2.43 406335 102 9569 387343 2.41 396912 103 9717 378966 2.50 388683 104 9267 368838 2.45 378105 105 8910 361594 2.40 370504 106 8598 349824 2.40 358422 107 8680 341322 2.48 350002 108 8247 331405 2.43 339652 109 8297 323276 2.50 331573 110 8059 315642 2.49 323701 111 7958 311465 2.49 319423 112 7580 302577 2.44 310157 113 7792 294939 2.57 302731 114 7379 288685 2.49 296064 115 7290 280027 2.54 287317 116 6890 272549 2.47 279439 117 6713 266269 2.46 272982 118 6526 258752 2.46 265278 119 6628 252772 2.56 259400 120 6359 246785 2.51 253144 121 6169 240415 2.50 246584 122 6073 235585 2.51 241658 123 6021 227439 2.58 233460 124 5725 222986 2.50 228711 125 5603 216446 2.52 222049 126 5398 211902 2.48 217300 127 5329 207580 2.50 212909 128 5034 201014 2.44 206048 129 5114 196688 2.53 201802 130 4976 191426 2.53 196402 131 4960 188089 2.57 193049 132 4676 181859 2.51 186535 133 4635 178050 2.54 182685 134 4666 173836 2.61 178502 135 4471 170239 2.56 174710 136 4305 166539 2.52 170844 137 4215 162768 2.52 166983 138 4037 159016 2.48 163053 139 4023 154943 2.53 158966 140 3911 150345 2.54 154256 141 3828 145997 2.55 149825 142 3726 142957 2.54 146683 143 3823 139342 2.67 143165 144 3647 136244 2.61 139891 145 3551 133834 2.58 137385 146 3423 130431 2.56 133854 147 3256 128673 2.47 131929 148 3342 126000 2.58 129342 149 3511 123518 2.76 127029 150 3462 120081 2.80 123543 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4543 15292 22.90 19835 2 4883 22985 17.52 27868 3 3311 29140 10.20 32451 4 3044 22902 11.73 25946 5 3086 26229 10.53 29315 6 1985 17265 10.31 19250 7 2182 15755 12.16 17937 8 2532 15839 13.78 18371 9 2420 15336 13.63 17756 10 2448 14578 14.38 17026 11 2638 14503 15.39 17141 12 3310 14210 18.89 17520 13 2841 13731 17.14 16572 14 2348 12957 15.34 15305 15 2351 12707 15.61 15058 16 2282 12512 15.43 14794 17 2310 12812 15.28 15122 18 2123 12428 14.59 14551 19 2068 11720 15.00 13788 20 2009 11561 14.80 13570 21 2197 11923 15.56 14120 22 2259 11546 16.36 13805 23 2025 11315 15.18 13340 24 2023 11177 15.33 13200 25 2000 10908 15.49 12908 26 1912 10486 15.42 12398 27 1871 10370 15.28 12241 28 1885 9837 16.08 11722 29 1796 9889 15.37 11685 30 1829 9618 15.98 11447 31 1738 9481 15.49 11219 32 1683 8901 15.90 10584 33 1600 8869 15.28 10469 34 1581 8763 15.28 10344 35 1570 8658 15.35 10228 36 1520 8460 15.23 9980 37 1481 8115 15.43 9596 38 1407 7901 15.12 9308 39 1391 7992 14.82 9383 40 1338 7432 15.26 8770 41 1421 7336 16.23 8757 42 1291 7321 14.99 8612 43 1406 7141 16.45 8547 44 1452 7074 17.03 8526 45 1238 6849 15.31 8087 46 1243 6617 15.81 7860 47 1181 6487 15.40 7668 48 1152 6400 15.25 7552 49 1167 6146 15.96 7313 50 1186 5928 16.67 7114 51 1117 5986 15.73 7103 52 1025 5823 14.97 6848 53 1097 5590 16.40 6687 54 972 5397 15.26 6369 55 959 5186 15.61 6145 56 939 5062 15.65 6001 57 1026 5270 16.30 6296 58 1014 5059 16.70 6073 59 856 5027 14.55 5883 60 934 4887 16.05 5821 61 891 4603 16.22 5494 62 837 4382 16.04 5219 63 814 4558 15.15 5372 64 827 4276 16.21 5103 65 762 4214 15.31 4976 66 781 4198 15.69 4979 67 840 4248 16.51 5088 68 747 4123 15.34 4870 69 783 3894 16.74 4677 70 740 3764 16.43 4504 71 668 3759 15.09 4427 72 658 3653 15.26 4311 73 723 3595 16.74 4318 74 675 3478 16.25 4153 75 707 3414 17.16 4121 76 637 3274 16.29 3911 77 607 3171 16.07 3778 78 630 3124 16.78 3754 79 583 3124 15.73 3707 80 573 2900 16.50 3473 81 589 3082 16.04 3671 82 592 2920 16.86 3512 83 609 2806 17.83 3415 84 534 2784 16.09 3318 85 553 2690 17.05 3243 86 523 2642 16.52 3165 87 479 2589 15.61 3068 88 459 2537 15.32 2996 89 466 2540 15.50 3006 90 435 2445 15.10 2880 91 477 2381 16.69 2858 92 482 2399 16.73 2881 93 510 2341 17.89 2851 94 406 2284 15.09 2690 95 430 2089 17.07 2519 96 413 2235 15.60 2648 97 357 2167 14.14 2524 98 402 1993 16.78 2395 99 354 1960 15.30 2314 100 384 2004 16.08 2388 101 391 1900 17.07 2291 102 352 1952 15.28 2304 103 349 1824 16.06 2173 104 354 1814 16.33 2168 105 334 1831 15.43 2165 106 311 1741 15.16 2052 107 329 1687 16.32 2016 108 323 1708 15.90 2031 109 307 1658 15.62 1965 110 303 1595 15.96 1898 111 324 1581 17.01 1905 112 280 1458 16.11 1738 113 294 1538 16.05 1832 114 292 1477 16.51 1769 115 260 1413 15.54 1673 116 260 1437 15.32 1697 117 278 1501 15.63 1779 118 285 1381 17.11 1666 119 251 1347 15.71 1598 120 275 1353 16.89 1628 121 240 1273 15.86 1513 122 254 1282 16.54 1536 123 202 1236 14.05 1438 124 221 1164 15.96 1385 125 237 1146 17.14 1383 126 220 1192 15.58 1412 127 233 1076 17.80 1309 128 191 1150 14.24 1341 129 217 1084 16.68 1301 130 218 1013 17.71 1231 131 207 1063 16.30 1270 132 205 1048 16.36 1253 133 176 948 15.66 1124 134 184 1000 15.54 1184 135 157 983 13.77 1140 136 177 906 16.34 1083 137 174 936 15.68 1110 138 175 871 16.73 1046 139 189 871 17.83 1060 140 166 868 16.05 1034 141 153 848 15.28 1001 142 178 780 18.58 958 143 152 856 15.08 1008 144 173 819 17.44 992 145 123 808 13.21 931 146 148 776 16.02 924 147 168 747 18.36 915 148 160 775 17.11 935 149 125 715 14.88 840 150 150 742 16.82 892 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 7264 82983 8.05 90247 2 4061 22999 15.01 27060 3 3379 30495 9.98 33874 4 1991 29297 6.36 31288 5 976 36431 2.61 37407 6 621 42158 1.45 42779 7 535 27680 1.90 28215 8 587 26594 2.16 27181 9 491 25547 1.89 26038 10 637 24238 2.56 24875 11 1202 23440 4.88 24642 12 458 23670 1.90 24128 13 448 23207 1.89 23655 14 354 22152 1.57 22506 15 331 21157 1.54 21488 16 475 20415 2.27 20890 17 275 20789 1.31 21064 18 274 21398 1.26 21672 19 270 19814 1.34 20084 20 231 19866 1.15 20097 21 275 19127 1.42 19402 22 234 19480 1.19 19714 23 220 18772 1.16 18992 24 187 18266 1.01 18453 25 191 17876 1.06 18067 26 206 17715 1.15 17921 27 192 17535 1.08 17727 28 178 17489 1.01 17667 29 172 16938 1.01 17110 30 171 16496 1.03 16667 31 157 15779 0.99 15936 32 154 15531 0.98 15685 33 152 15528 0.97 15680 34 136 15137 0.89 15273 35 142 14663 0.96 14805 36 122 14184 0.85 14306 37 160 14666 1.08 14826 38 127 13507 0.93 13634 39 151 13818 1.08 13969 40 138 12914 1.06 13052 41 138 12568 1.09 12706 42 132 12534 1.04 12666 43 138 12678 1.08 12816 44 122 11934 1.01 12056 45 139 11912 1.15 12051 46 130 11455 1.12 11585 47 112 11095 1.00 11207 48 116 11040 1.04 11156 49 123 10699 1.14 10822 50 121 10542 1.13 10663 51 128 10310 1.23 10438 52 97 10011 0.96 10108 53 102 9783 1.03 9885 54 94 9569 0.97 9663 55 117 9374 1.23 9491 56 98 9172 1.06 9270 57 93 9092 1.01 9185 58 92 8793 1.04 8885 59 104 8661 1.19 8765 60 92 8604 1.06 8696 61 86 8266 1.03 8352 62 84 7978 1.04 8062 63 104 7722 1.33 7826 64 69 7634 0.90 7703 65 70 7577 0.92 7647 66 83 7424 1.11 7507 67 88 7504 1.16 7592 68 94 7395 1.26 7489 69 75 7047 1.05 7122 70 73 6762 1.07 6835 71 81 6648 1.20 6729 72 81 6399 1.25 6480 73 76 6338 1.18 6414 74 68 6051 1.11 6119 75 87 5960 1.44 6047 76 61 6088 0.99 6149 77 92 5653 1.60 5745 78 58 5562 1.03 5620 79 55 5455 1.00 5510 80 66 5374 1.21 5440 81 70 5262 1.31 5332 82 60 4988 1.19 5048 83 52 4918 1.05 4970 84 53 4731 1.11 4784 85 64 4803 1.31 4867 86 35 4581 0.76 4616 87 50 4537 1.09 4587 88 57 4350 1.29 4407 89 51 4344 1.16 4395 90 41 4380 0.93 4421 91 63 4168 1.49 4231 92 58 4082 1.40 4140 93 50 3856 1.28 3906 94 42 4036 1.03 4078 95 57 3736 1.50 3793 96 46 3656 1.24 3702 97 48 3590 1.32 3638 98 47 3342 1.39 3389 99 38 3343 1.12 3381 100 43 3413 1.24 3456 101 53 3322 1.57 3375 102 40 3399 1.16 3439 103 37 3061 1.19 3098 104 36 3091 1.15 3127 105 33 3044 1.07 3077 106 39 2969 1.30 3008 107 39 2761 1.39 2800 108 47 2818 1.64 2865 109 36 2711 1.31 2747 110 29 2671 1.07 2700 111 35 2621 1.32 2656 112 39 2605 1.48 2644 113 36 2567 1.38 2603 114 34 2560 1.31 2594 115 36 2297 1.54 2333 116 27 2395 1.11 2422 117 34 2352 1.42 2386 118 33 2255 1.44 2288 119 25 2190 1.13 2215 120 32 2196 1.44 2228 121 28 2231 1.24 2259 122 32 2065 1.53 2097 123 26 1971 1.30 1997 124 29 2076 1.38 2105 125 27 1978 1.35 2005 126 24 2030 1.17 2054 127 17 1967 0.86 1984 128 25 1835 1.34 1860 129 26 1844 1.39 1870 130 27 1767 1.51 1794 131 32 1877 1.68 1909 132 18 1739 1.02 1757 133 23 1714 1.32 1737 134 20 1607 1.23 1627 135 22 1605 1.35 1627 136 11 1608 0.68 1619 137 29 1606 1.77 1635 138 16 1479 1.07 1495 139 17 1564 1.08 1581 140 16 1454 1.09 1470 141 24 1384 1.70 1408 142 26 1420 1.80 1446 143 23 1370 1.65 1393 144 16 1373 1.15 1389 145 20 1319 1.49 1339 146 12 1380 0.86 1392 147 17 1253 1.34 1270 148 20 1221 1.61 1241 149 24 1266 1.86 1290 150 22 1172 1.84 1194 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 20685 64986 24.14 85671 2 18218 95385 16.04 113603 3 14513 86222 14.41 100735 4 10442 83511 11.11 93953 5 7533 97709 7.16 105242 6 6125 104411 5.54 110536 7 6306 116963 5.12 123269 8 5908 114787 4.89 120695 9 5380 106002 4.83 111382 10 4505 102323 4.22 106828 11 5672 96242 5.57 101914 12 4598 94805 4.63 99403 13 4738 94649 4.77 99387 14 4101 90672 4.33 94773 15 5108 88244 5.47 93352 16 4582 84577 5.14 89159 17 4585 83119 5.23 87704 18 3597 82036 4.20 85633 19 4406 80517 5.19 84923 20 3717 79709 4.46 83426 21 4108 75165 5.18 79273 22 3410 75545 4.32 78955 23 4053 73215 5.25 77268 24 3155 72245 4.18 75400 25 3758 71875 4.97 75633 26 3239 70814 4.37 74053 27 3570 69395 4.89 72965 28 3031 70173 4.14 73204 29 3488 67820 4.89 71308 30 2967 67272 4.22 70239 31 3508 64713 5.14 68221 32 2863 63136 4.34 65999 33 3277 61914 5.03 65191 34 2869 60385 4.54 63254 35 3407 59118 5.45 62525 36 2670 57569 4.43 60239 37 3053 56876 5.09 59929 38 2664 55809 4.56 58473 39 3142 54150 5.48 57292 40 2473 53049 4.45 55522 41 2906 52869 5.21 55775 42 2431 50931 4.56 53362 43 2881 49593 5.49 52474 44 2391 48924 4.66 51315 45 2681 47546 5.34 50227 46 2333 47079 4.72 49412 47 2680 46137 5.49 48817 48 2272 44900 4.82 47172 49 2465 44195 5.28 46660 50 2342 43273 5.13 45615 51 2480 42328 5.53 44808 52 2156 41165 4.98 43321 53 2378 40157 5.59 42535 54 2290 39577 5.47 41867 55 2397 37773 5.97 40170 56 2050 37845 5.14 39895 57 2133 36351 5.54 38484 58 1991 36271 5.20 38262 59 2255 35323 6.00 37578 60 1911 34078 5.31 35989 61 2050 33252 5.81 35302 62 1985 32968 5.68 34953 63 1904 31673 5.67 33577 64 1831 30796 5.61 32627 65 1933 30326 5.99 32259 66 1740 29441 5.58 31181 67 1907 29367 6.10 31274 68 1735 28434 5.75 30169 69 1748 28513 5.78 30261 70 1597 27983 5.40 29580 71 1737 27024 6.04 28761 72 1596 26281 5.73 27877 73 1665 26014 6.02 27679 74 1577 25952 5.73 27529 75 1615 24698 6.14 26313 76 1540 24192 5.98 25732 77 1486 23701 5.90 25187 78 1425 23877 5.63 25302 79 1485 23038 6.06 24523 80 1409 22429 5.91 23838 81 1375 22025 5.88 23400 82 1276 21337 5.64 22613 83 1459 20748 6.57 22207 84 1246 20624 5.70 21870 85 1355 19810 6.40 21165 86 1206 19529 5.82 20735 87 1275 19143 6.24 20418 88 1166 18918 5.81 20084 89 1202 18453 6.12 19655 90 1139 17977 5.96 19116 91 1181 17621 6.28 18802 92 1091 17309 5.93 18400 93 1103 16813 6.16 17916 94 1113 16655 6.26 17768 95 1129 16279 6.49 17408 96 1080 16349 6.20 17429 97 1020 15958 6.01 16978 98 1017 15515 6.15 16532 99 1045 15085 6.48 16130 100 980 14632 6.28 15612 101 980 14335 6.40 15315 102 940 14104 6.25 15044 103 999 14059 6.63 15058 104 892 13848 6.05 14740 105 927 13592 6.38 14519 106 867 12766 6.36 13633 107 906 12439 6.79 13345 108 883 12384 6.66 13267 109 882 12058 6.82 12940 110 840 11803 6.64 12643 111 854 11882 6.71 12736 112 818 11508 6.64 12326 113 865 11230 7.15 12095 114 799 11135 6.70 11934 115 845 10798 7.26 11643 116 792 10496 7.02 11288 117 773 10452 6.89 11225 118 739 10229 6.74 10968 119 805 9780 7.61 10585 120 707 9555 6.89 10262 121 727 9414 7.17 10141 122 754 9370 7.45 10124 123 735 9127 7.45 9862 124 700 8771 7.39 9471 125 713 8710 7.57 9423 126 669 8481 7.31 9150 127 685 8393 7.55 9078 128 664 8138 7.54 8802 129 709 8096 8.05 8805 130 652 7930 7.60 8582 131 702 7736 8.32 8438 132 628 7548 7.68 8176 133 680 7371 8.45 8051 134 622 7194 7.96 7816 135 673 7230 8.52 7903 136 601 6971 7.94 7572 137 675 6941 8.86 7616 138 627 6832 8.41 7459 139 670 6580 9.24 7250 140 564 6358 8.15 6922 141 614 6320 8.85 6934 142 598 6331 8.63 6929 143 603 6015 9.11 6618 144 594 6098 8.88 6692 145 622 5941 9.48 6563 146 591 5811 9.23 6402 147 593 5796 9.28 6389 148 568 5725 9.03 6293 149 639 5474 10.45 6113 150 566 5418 9.46 5984