CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 170418 611965 21.78 782383 2 179295 966474 15.65 1145769 3 147417 1243604 10.60 1391021 4 160158 926207 14.74 1086365 5 138387 1138677 10.84 1277064 6 105173 798378 11.64 903551 7 102477 712104 12.58 814581 8 117734 768012 13.29 885746 9 122826 770613 13.75 893439 10 132743 738861 15.23 871604 11 153449 778762 16.46 932211 12 189325 785306 19.43 974631 13 186800 783759 19.25 970559 14 159416 785995 16.86 945411 15 158948 770471 17.10 929419 16 160626 778290 17.11 938916 17 168978 792290 17.58 961268 18 160823 796228 16.80 957051 19 157378 761436 17.13 918814 20 162916 776981 17.33 939897 21 164475 792412 17.19 956887 22 164972 788478 17.30 953450 23 164980 785730 17.35 950710 24 166115 795949 17.27 962064 25 169747 793699 17.62 963446 26 170274 784013 17.84 954287 27 170035 794832 17.62 964867 28 168227 780236 17.74 948463 29 168393 773757 17.87 942150 30 167257 783876 17.59 951133 31 167343 786567 17.54 953910 32 167500 779556 17.69 947056 33 166172 781551 17.53 947723 34 168736 778556 17.81 947292 35 168869 777929 17.84 946798 36 167616 806766 17.20 974382 37 167213 773152 17.78 940365 38 169962 784401 17.81 954363 39 167895 789235 17.54 957130 40 165647 764662 17.81 930309 41 169802 769765 18.07 939567 42 168296 775012 17.84 943308 43 167546 763532 17.99 931078 44 171442 771877 18.17 943319 45 167688 769779 17.89 937467 46 166279 759510 17.96 925789 47 165510 757282 17.94 922792 48 167614 767620 17.92 935234 49 166005 757925 17.97 923930 50 165938 767636 17.77 933574 51 164318 759902 17.78 924220 52 160608 752148 17.60 912756 53 161393 737292 17.96 898685 54 159192 742468 17.66 901660 55 159055 736592 17.76 895647 56 159724 733556 17.88 893280 57 161822 744241 17.86 906063 58 157245 731042 17.70 888287 59 157311 730331 17.72 887642 60 154949 731072 17.49 886021 61 153430 711518 17.74 864948 62 152482 705195 17.78 857677 63 151411 705416 17.67 856827 64 150721 703687 17.64 854408 65 150716 697098 17.78 847814 66 149575 704587 17.51 854162 67 151014 691810 17.92 842824 68 145985 688104 17.50 834089 69 145311 688143 17.43 833454 70 142953 676507 17.44 819460 71 142135 661452 17.69 803587 72 141500 661743 17.62 803243 73 138453 648662 17.59 787115 74 138605 644336 17.70 782941 75 137010 641550 17.60 778560 76 133736 631845 17.47 765581 77 134345 625962 17.67 760307 78 131430 620759 17.47 752189 79 130152 611418 17.55 741570 80 129588 612063 17.47 741651 81 128024 609189 17.37 737213 82 127667 596845 17.62 724512 83 127484 595721 17.63 723205 84 124414 597093 17.24 721507 85 121351 578788 17.33 700139 86 120869 576505 17.33 697374 87 118833 567093 17.32 685926 88 118699 567069 17.31 685768 89 116839 559685 17.27 676524 90 115344 557729 17.14 673073 91 115537 543447 17.53 658984 92 111761 536729 17.23 648490 93 111859 534620 17.30 646479 94 107782 513410 17.35 621192 95 106082 509067 17.24 615149 96 104249 508338 17.02 612587 97 101834 496289 17.03 598123 98 100668 491121 17.01 591789 99 99362 484271 17.02 583633 100 98316 478273 17.05 576589 101 97950 474943 17.10 572893 102 95807 474300 16.81 570107 103 93920 459597 16.97 553517 104 93887 453112 17.16 546999 105 92734 448167 17.14 540901 106 90043 440953 16.96 530996 107 87488 433974 16.78 521462 108 86991 437443 16.59 524434 109 86659 427408 16.86 514067 110 85358 418814 16.93 504172 111 83886 418462 16.70 502348 112 82248 407442 16.80 489690 113 82135 402631 16.94 484766 114 81683 399824 16.96 481507 115 79748 391282 16.93 471030 116 77821 389844 16.64 467665 117 75756 387773 16.34 463529 118 73174 376827 16.26 450001 119 73434 376327 16.33 449761 120 72075 366580 16.43 438655 121 70953 359263 16.49 430216 122 70715 355332 16.60 426047 123 69001 348267 16.54 417268 124 68618 341862 16.72 410480 125 69053 339745 16.89 408798 126 66499 334831 16.57 401330 127 64915 328049 16.52 392964 128 63310 322582 16.41 385892 129 62276 316114 16.46 378390 130 61003 311885 16.36 372888 131 60139 307696 16.35 367835 132 59630 305004 16.35 364634 133 57942 295417 16.40 353359 134 57416 291945 16.43 349361 135 57148 289407 16.49 346555 136 56831 284782 16.64 341613 137 56203 282537 16.59 338740 138 54267 277473 16.36 331740 139 54042 274227 16.46 328269 140 53067 271608 16.34 324675 141 50708 265252 16.05 315960 142 49412 258985 16.02 308397 143 48098 255834 15.83 303932 144 47920 251942 15.98 299862 145 46758 248040 15.86 294798 146 46468 248843 15.74 295311 147 46812 248143 15.87 294955 148 45609 241685 15.88 287294 149 43876 237849 15.57 281725 150 42708 232521 15.52 275229 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 224638 2691166 7.70 2915804 2 110789 992823 10.04 1103612 3 88956 1455064 5.76 1544020 4 94746 1279562 6.89 1374308 5 48054 1591796 2.93 1639850 6 28523 2001313 1.41 2029836 7 22184 1310463 1.66 1332647 8 23180 1246551 1.83 1269731 9 21061 1278835 1.62 1299896 10 27550 1245391 2.16 1272941 11 45275 1256215 3.48 1301490 12 22966 1322493 1.71 1345459 13 25597 1350081 1.86 1375678 14 18658 1337010 1.38 1355668 15 19713 1295086 1.50 1314799 16 22173 1297584 1.68 1319757 17 18047 1323920 1.34 1341967 18 19395 1378229 1.39 1397624 19 17439 1283509 1.34 1300948 20 17560 1293769 1.34 1311329 21 17671 1299845 1.34 1317516 22 16976 1326508 1.26 1343484 23 16638 1328984 1.24 1345622 24 16904 1314892 1.27 1331796 25 16729 1332552 1.24 1349281 26 16424 1313750 1.23 1330174 27 16487 1312428 1.24 1328915 28 16526 1324672 1.23 1341198 29 16527 1316273 1.24 1332800 30 15980 1311533 1.20 1327513 31 15962 1309059 1.20 1325021 32 16002 1295771 1.22 1311773 33 16060 1321308 1.20 1337368 34 15938 1322511 1.19 1338449 35 16106 1321553 1.20 1337659 36 15663 1298716 1.19 1314379 37 16417 1337050 1.21 1353467 38 15711 1304655 1.19 1320366 39 16249 1336211 1.20 1352460 40 16023 1304146 1.21 1320169 41 16156 1318337 1.21 1334493 42 16238 1312570 1.22 1328808 43 16386 1320065 1.23 1336451 44 15835 1290396 1.21 1306231 45 16385 1298399 1.25 1314784 46 16169 1287454 1.24 1303623 47 15923 1271579 1.24 1287502 48 16265 1274690 1.26 1290955 49 16670 1291099 1.27 1307769 50 16483 1272317 1.28 1288800 51 16611 1274639 1.29 1291250 52 16387 1271893 1.27 1288280 53 16578 1269435 1.29 1286013 54 16477 1243521 1.31 1259998 55 16674 1259545 1.31 1276219 56 16546 1239368 1.32 1255914 57 17004 1246927 1.35 1263931 58 16605 1232127 1.33 1248732 59 16851 1217748 1.36 1234599 60 16718 1223861 1.35 1240579 61 16956 1232591 1.36 1249547 62 16810 1208607 1.37 1225417 63 16596 1189785 1.38 1206381 64 16865 1187784 1.40 1204649 65 16972 1186034 1.41 1203006 66 16912 1176046 1.42 1192958 67 17193 1184355 1.43 1201548 68 16602 1154380 1.42 1170982 69 17030 1152469 1.46 1169499 70 16645 1152697 1.42 1169342 71 16843 1130427 1.47 1147270 72 16832 1121931 1.48 1138763 73 16801 1116550 1.48 1133351 74 16820 1096649 1.51 1113469 75 16855 1089922 1.52 1106777 76 16440 1085487 1.49 1101927 77 16430 1065261 1.52 1081691 78 16538 1052587 1.55 1069125 79 16254 1049570 1.53 1065824 80 16521 1030116 1.58 1046637 81 16728 1040533 1.58 1057261 82 16079 1010652 1.57 1026731 83 16315 1002137 1.60 1018452 84 16264 989460 1.62 1005724 85 16161 990112 1.61 1006273 86 15584 966778 1.59 982362 87 15975 962142 1.63 978117 88 15801 950378 1.64 966179 89 15724 938257 1.65 953981 90 15849 938549 1.66 954398 91 15492 924276 1.65 939768 92 15341 902410 1.67 917751 93 15298 904015 1.66 919313 94 15488 906527 1.68 922015 95 14907 861690 1.70 876597 96 14637 851253 1.69 865890 97 14891 851088 1.72 865979 98 14558 824933 1.73 839491 99 14633 817569 1.76 832202 100 14370 812688 1.74 827058 101 14495 804225 1.77 818720 102 14562 818895 1.75 833457 103 13978 778569 1.76 792547 104 13665 757579 1.77 771244 105 13701 748847 1.80 762548 106 13332 736416 1.78 749748 107 13054 723875 1.77 736929 108 13293 716705 1.82 729998 109 12962 708672 1.80 721634 110 12889 694544 1.82 707433 111 12911 691728 1.83 704639 112 12637 684058 1.81 696695 113 12377 666923 1.82 679300 114 12353 662919 1.83 675272 115 12202 645789 1.85 657991 116 11997 635026 1.85 647023 117 11919 631582 1.85 643501 118 11780 620135 1.86 631915 119 11562 610074 1.86 621636 120 11801 602656 1.92 614457 121 11584 594235 1.91 605819 122 11249 580974 1.90 592223 123 11414 579771 1.93 591185 124 11121 562353 1.94 573474 125 11097 558409 1.95 569506 126 10827 548653 1.94 559480 127 10579 544812 1.90 555391 128 10477 533641 1.93 544118 129 10486 530482 1.94 540968 130 10305 517763 1.95 528068 131 10031 507601 1.94 517632 132 9942 503669 1.94 513611 133 10227 501272 2.00 511499 134 9715 489176 1.95 498891 135 9755 480479 1.99 490234 136 9551 472819 1.98 482370 137 9477 472114 1.97 481591 138 9348 463034 1.98 472382 139 9091 452438 1.97 461529 140 8722 440834 1.94 449556 141 8722 438273 1.95 446995 142 8527 431307 1.94 439834 143 8226 418713 1.93 426939 144 8176 417656 1.92 425832 145 8098 412108 1.93 420206 146 7854 408394 1.89 416248 147 7727 401968 1.89 409695 148 7890 393512 1.97 401402 149 8175 390914 2.05 399089 150 8156 384995 2.07 393151 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 574869 2339839 19.72 2914708 2 468058 3082114 13.18 3550172 3 351077 2902036 10.79 3253113 4 358613 2803604 11.34 3162217 5 212017 3426821 5.83 3638838 6 153336 3871561 3.81 4024897 7 136422 4492216 2.95 4628638 8 143986 4424569 3.15 4568555 9 110468 4188733 2.57 4299201 10 103090 4102126 2.45 4205216 11 113645 4002826 2.76 4116471 12 103585 3981991 2.54 4085576 13 101364 4063198 2.43 4164562 14 93519 4011593 2.28 4105112 15 102049 3961838 2.51 4063887 16 109525 3916295 2.72 4025820 17 94263 3887892 2.37 3982155 18 89298 3956479 2.21 4045777 19 96788 3994435 2.37 4091223 20 90602 4036257 2.20 4126859 21 92411 3921587 2.30 4013998 22 85146 3957479 2.11 4042625 23 90756 3988629 2.22 4079385 24 82688 3969392 2.04 4052080 25 89055 4034118 2.16 4123173 26 83426 4033556 2.03 4116982 27 85786 4033088 2.08 4118874 28 81559 4095831 1.95 4177390 29 85205 4113670 2.03 4198875 30 79341 4090927 1.90 4170268 31 84384 4109370 2.01 4193754 32 80768 4080575 1.94 4161343 33 80914 4090195 1.94 4171109 34 77482 4107568 1.85 4185050 35 80231 4083665 1.93 4163896 36 74439 4084985 1.79 4159424 37 79585 4117738 1.90 4197323 38 75218 4110549 1.80 4185767 39 79000 4091190 1.89 4170190 40 73610 4076994 1.77 4150604 41 77525 4179350 1.82 4256875 42 71275 4087445 1.71 4158720 43 76935 4099939 1.84 4176874 44 71987 4116823 1.72 4188810 45 76031 4121072 1.81 4197103 46 72863 4117439 1.74 4190302 47 76310 4119316 1.82 4195626 48 71408 4066540 1.73 4137948 49 74730 4095569 1.79 4170299 50 72790 4092311 1.75 4165101 51 74780 4073137 1.80 4147917 52 71932 4031328 1.75 4103260 53 73807 4025435 1.80 4099242 54 71179 3983474 1.76 4054653 55 72206 3966618 1.79 4038824 56 71223 3974536 1.76 4045759 57 72236 3935623 1.80 4007859 58 70975 3958827 1.76 4029802 59 74367 3954057 1.85 4028424 60 69314 3869978 1.76 3939292 61 70841 3860366 1.80 3931207 62 69566 3885169 1.76 3954735 63 70394 3776009 1.83 3846403 64 68563 3756510 1.79 3825073 65 70789 3725654 1.86 3796443 66 66670 3707560 1.77 3774230 67 71233 3727034 1.88 3798267 68 67522 3660582 1.81 3728104 69 68687 3670091 1.84 3738778 70 67342 3634389 1.82 3701731 71 70232 3580076 1.92 3650308 72 66725 3545838 1.85 3612563 73 68079 3546378 1.88 3614457 74 66458 3548953 1.84 3615411 75 66342 3467111 1.88 3533453 76 65370 3430300 1.87 3495670 77 65909 3418618 1.89 3484527 78 65405 3426720 1.87 3492125 79 66530 3383757 1.93 3450287 80 64879 3318194 1.92 3383073 81 64449 3297389 1.92 3361838 82 63247 3279719 1.89 3342966 83 64003 3195130 1.96 3259133 84 61026 3151819 1.90 3212845 85 62651 3117336 1.97 3179987 86 61068 3100824 1.93 3161892 87 62202 3053354 2.00 3115556 88 60485 3049235 1.95 3109720 89 61831 3017977 2.01 3079808 90 58509 2943458 1.95 3001967 91 60545 2931056 2.02 2991601 92 59547 2895358 2.02 2954905 93 58862 2854955 2.02 2913817 94 57723 2833104 2.00 2890827 95 58252 2807274 2.03 2865526 96 56825 2800916 1.99 2857741 97 56946 2759668 2.02 2816614 98 56138 2676505 2.05 2732643 99 55310 2638600 2.05 2693910 100 55465 2605130 2.08 2660595 101 54986 2582797 2.08 2637783 102 52921 2564065 2.02 2616986 103 54064 2556741 2.07 2610805 104 53158 2505532 2.08 2558690 105 52776 2495500 2.07 2548276 106 51491 2431070 2.07 2482561 107 51640 2382291 2.12 2433931 108 50022 2373833 2.06 2423855 109 51082 2313895 2.16 2364977 110 49430 2291463 2.11 2340893 111 50081 2289595 2.14 2339676 112 48640 2236746 2.13 2285386 113 48608 2199456 2.16 2248064 114 47442 2175085 2.13 2222527 115 47822 2137642 2.19 2185464 116 46774 2103117 2.18 2149891 117 45940 2069552 2.17 2115492 118 45511 2037174 2.19 2082685 119 45859 2011352 2.23 2057211 120 44927 1976265 2.22 2021192 121 44041 1951309 2.21 1995350 122 43963 1923689 2.23 1967652 123 42756 1886799 2.22 1929555 124 42425 1858654 2.23 1901079 125 42094 1832676 2.25 1874770 126 40637 1805357 2.20 1845994 127 40858 1786126 2.24 1826984 128 39819 1749271 2.23 1789090 129 39419 1724861 2.23 1764280 130 39093 1696896 2.25 1735989 131 38936 1680636 2.26 1719572 132 37853 1645797 2.25 1683650 133 37660 1619722 2.27 1657382 134 37494 1594928 2.30 1632422 135 36538 1568235 2.28 1604773 136 35484 1551077 2.24 1586561 137 35940 1533439 2.29 1569379 138 35191 1514209 2.27 1549400 139 34949 1487308 2.30 1522257 140 33906 1451495 2.28 1485401 141 32811 1426888 2.25 1459699 142 33134 1406868 2.30 1440002 143 32140 1387497 2.26 1419637 144 31546 1368735 2.25 1400281 145 31530 1353160 2.28 1384690 146 30879 1334408 2.26 1365287 147 29734 1319128 2.20 1348862 148 30746 1303387 2.30 1334133 149 31296 1288713 2.37 1320009 150 29976 1264191 2.32 1294167 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 46162 194823 19.16 240985 2 45438 281501 13.90 326939 3 35773 369611 8.82 405384 4 45187 261322 14.74 306509 5 35764 299738 10.66 335502 6 27412 217783 11.18 245195 7 25417 196222 11.47 221639 8 29420 203836 12.61 233256 9 29323 199499 12.81 228822 10 31311 190305 14.13 221616 11 37484 191127 16.40 228611 12 51999 192267 21.29 244266 13 52094 189115 21.60 241209 14 33630 184499 15.42 218129 15 33164 178371 15.68 211535 16 33130 177820 15.71 210950 17 35127 182162 16.17 217289 18 32311 177340 15.41 209651 19 31060 169817 15.46 200877 20 31936 168918 15.90 200854 21 31704 169807 15.73 201511 22 31229 166094 15.83 197323 23 30297 161456 15.80 191753 24 29866 161684 15.59 191550 25 30746 159292 16.18 190038 26 29803 153676 16.24 183479 27 29176 153513 15.97 182689 28 28850 148299 16.29 177149 29 28224 143893 16.40 172117 30 27616 142922 16.19 170538 31 26944 142078 15.94 169022 32 26632 137413 16.23 164045 33 26192 136297 16.12 162489 34 26264 133366 16.45 159630 35 25370 132270 16.09 157640 36 24748 134250 15.56 158998 37 24666 127600 16.20 152266 38 24258 124763 16.28 149021 39 23640 124839 15.92 148479 40 23387 118036 16.54 141423 41 23520 117796 16.64 141316 42 22672 118064 16.11 140736 43 22753 113931 16.65 136684 44 22794 113372 16.74 136166 45 21852 111471 16.39 133323 46 21541 108872 16.52 130413 47 20922 106747 16.39 127669 48 20726 105718 16.39 126444 49 20742 103394 16.71 124136 50 20380 102036 16.65 122416 51 19604 101282 16.22 120886 52 19109 97728 16.36 116837 53 18632 95394 16.34 114026 54 18456 94140 16.39 112596 55 18416 92618 16.59 111034 56 17999 90544 16.58 108543 57 18154 92423 16.42 110577 58 17219 89215 16.18 106434 59 17170 87890 16.34 105060 60 16901 86564 16.33 103465 61 16349 83221 16.42 99570 62 16142 81838 16.47 97980 63 15816 79954 16.51 95770 64 15652 79192 16.50 94844 65 15477 78127 16.53 93604 66 15322 77723 16.47 93045 67 15252 76245 16.67 91497 68 14809 74538 16.57 89347 69 14365 74357 16.19 88722 70 14354 71089 16.80 85443 71 13990 69732 16.71 83722 72 13677 69573 16.43 83250 73 13385 67617 16.52 81002 74 13195 66240 16.61 79435 75 13414 66319 16.82 79733 76 12728 64725 16.43 77453 77 12560 63596 16.49 76156 78 12379 62201 16.60 74580 79 11979 60817 16.46 72796 80 12140 60514 16.71 72654 81 11706 59733 16.39 71439 82 11649 58686 16.56 70335 83 11676 57359 16.91 69035 84 11402 57345 16.59 68747 85 11280 55594 16.87 66874 86 11020 54028 16.94 65048 87 10728 53772 16.63 64500 88 10462 53196 16.43 63658 89 10427 52839 16.48 63266 90 10201 52897 16.17 63098 91 10300 50464 16.95 60764 92 9695 49498 16.38 59193 93 9773 49470 16.50 59243 94 9252 47218 16.38 56470 95 9186 46301 16.56 55487 96 9076 46732 16.26 55808 97 8811 44690 16.47 53501 98 8483 44432 16.03 52915 99 8696 43537 16.65 52233 100 8459 43167 16.39 51626 101 8323 42575 16.35 50898 102 8268 42650 16.24 50918 103 7934 41014 16.21 48948 104 7899 40224 16.41 48123 105 7919 39893 16.56 47812 106 7741 38967 16.57 46708 107 7312 37652 16.26 44964 108 7368 38643 16.01 46011 109 7382 37367 16.50 44749 110 7163 36351 16.46 43514 111 6955 36313 16.07 43268 112 6720 34736 16.21 41456 113 6672 34673 16.14 41345 114 6710 34378 16.33 41088 115 6544 33700 16.26 40244 116 6533 33585 16.28 40118 117 6336 33404 15.94 39740 118 6178 32190 16.10 38368 119 6043 32418 15.71 38461 120 5918 31877 15.66 37795 121 5914 30498 16.24 36412 122 5883 30171 16.32 36054 123 5698 29697 16.10 35395 124 5761 29200 16.48 34961 125 5847 29065 16.75 34912 126 5489 28679 16.06 34168 127 5260 28021 15.80 33281 128 5143 27362 15.82 32505 129 5094 26766 15.99 31860 130 4817 26331 15.46 31148 131 4995 25680 16.28 30675 132 4806 25664 15.77 30470 133 4671 25074 15.70 29745 134 4803 24636 16.32 29439 135 4596 24459 15.82 29055 136 4716 23916 16.47 28632 137 4494 23412 16.10 27906 138 4491 23366 16.12 27857 139 4432 23304 15.98 27736 140 4352 23262 15.76 27614 141 4117 22440 15.50 26557 142 4112 21513 16.05 25625 143 3922 21585 15.38 25507 144 3866 20986 15.56 24852 145 3871 20567 15.84 24438 146 3924 20964 15.77 24888 147 3942 21278 15.63 25220 148 3752 20208 15.66 23960 149 3633 19815 15.49 23448 150 3406 19341 14.97 22747 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 63053 756311 7.70 819364 2 33442 333773 9.11 367215 3 29682 384106 7.17 413788 4 29338 351860 7.70 381198 5 22259 409605 5.15 431864 6 8775 497172 1.73 505947 7 7105 344099 2.02 351204 8 7558 322627 2.29 330185 9 6571 324823 1.98 331394 10 10074 306715 3.18 316789 11 19055 301869 5.94 320924 12 7753 309753 2.44 317506 13 9022 312435 2.81 321457 14 5037 315093 1.57 320130 15 5863 290853 1.98 296716 16 7471 283956 2.56 291427 17 4938 291355 1.67 296293 18 5514 309992 1.75 315506 19 4567 270784 1.66 275351 20 4645 272601 1.68 277246 21 4453 265864 1.65 270317 22 4054 268225 1.49 272279 23 4031 266321 1.49 270352 24 3896 256218 1.50 260114 25 3807 257519 1.46 261326 26 3651 250287 1.44 253938 27 3644 247525 1.45 251169 28 3516 243583 1.42 247099 29 3523 241613 1.44 245136 30 3317 235671 1.39 238988 31 3110 227531 1.35 230641 32 3088 220378 1.38 223466 33 3131 224812 1.37 227943 34 3010 219707 1.35 222717 35 3082 217067 1.40 220149 36 2782 209970 1.31 212752 37 2943 214547 1.35 217490 38 2719 202736 1.32 205455 39 2850 206014 1.36 208864 40 2635 195603 1.33 198238 41 2650 196398 1.33 199048 42 2572 192067 1.32 194639 43 2629 190151 1.36 192780 44 2514 181992 1.36 184506 45 2486 182356 1.34 184842 46 2362 177045 1.32 179407 47 2180 173156 1.24 175336 48 2291 170663 1.32 172954 49 2339 169018 1.36 171357 50 2247 166369 1.33 168616 51 2227 165131 1.33 167358 52 2178 160333 1.34 162511 53 2165 158106 1.35 160271 54 2092 152771 1.35 154863 55 2167 152783 1.40 154950 56 2000 148901 1.33 150901 57 2015 147561 1.35 149576 58 1984 143650 1.36 145634 59 1880 140659 1.32 142539 60 1883 140393 1.32 142276 61 2006 139213 1.42 141219 62 1853 136808 1.34 138661 63 1860 132197 1.39 134057 64 1837 129100 1.40 130937 65 1782 128749 1.37 130531 66 1786 126191 1.40 127977 67 1770 126144 1.38 127914 68 1677 121754 1.36 123431 69 1775 119301 1.47 121076 70 1653 118419 1.38 120072 71 1712 116591 1.45 118303 72 1656 115390 1.41 117046 73 1563 112923 1.37 114486 74 1563 110066 1.40 111629 75 1589 108706 1.44 110295 76 1472 106708 1.36 108180 77 1553 104645 1.46 106198 78 1443 102112 1.39 103555 79 1407 101352 1.37 102759 80 1402 98752 1.40 100154 81 1460 99165 1.45 100625 82 1375 95395 1.42 96770 83 1318 94677 1.37 95995 84 1367 92521 1.46 93888 85 1331 91979 1.43 93310 86 1321 89504 1.45 90825 87 1325 88084 1.48 89409 88 1293 87466 1.46 88759 89 1242 86474 1.42 87716 90 1262 85620 1.45 86882 91 1235 83721 1.45 84956 92 1233 80986 1.50 82219 93 1232 82349 1.47 83581 94 1227 81885 1.48 83112 95 1098 76714 1.41 77812 96 1179 76021 1.53 77200 97 1129 75337 1.48 76466 98 1051 72208 1.43 73259 99 1071 72464 1.46 73535 100 1060 70921 1.47 71981 101 1056 70152 1.48 71208 102 1046 71903 1.43 72949 103 1020 68232 1.47 69252 104 1051 66003 1.57 67054 105 976 64790 1.48 65766 106 1019 63302 1.58 64321 107 926 62915 1.45 63841 108 967 61434 1.55 62401 109 929 60780 1.51 61709 110 975 59078 1.62 60053 111 865 58272 1.46 59137 112 854 58247 1.44 59101 113 870 56535 1.52 57405 114 829 56522 1.45 57351 115 818 54881 1.47 55699 116 889 53581 1.63 54470 117 821 53176 1.52 53997 118 764 52328 1.44 53092 119 810 51929 1.54 52739 120 768 50600 1.50 51368 121 731 49923 1.44 50654 122 740 48243 1.51 48983 123 716 48211 1.46 48927 124 737 47218 1.54 47955 125 780 47181 1.63 47961 126 706 46197 1.51 46903 127 714 45356 1.55 46070 128 639 44885 1.40 45524 129 663 44617 1.46 45280 130 657 43084 1.50 43741 131 685 42172 1.60 42857 132 623 41421 1.48 42044 133 628 41257 1.50 41885 134 629 40290 1.54 40919 135 599 39743 1.48 40342 136 663 39146 1.67 39809 137 584 39006 1.48 39590 138 549 37792 1.43 38341 139 619 37283 1.63 37902 140 573 36308 1.55 36881 141 594 36068 1.62 36662 142 589 35516 1.63 36105 143 551 34744 1.56 35295 144 556 34158 1.60 34714 145 580 34030 1.68 34610 146 538 33715 1.57 34253 147 557 33181 1.65 33738 148 584 31846 1.80 32430 149 546 32060 1.67 32606 150 537 31674 1.67 32211 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 150119 747667 16.72 897786 2 128937 945080 12.01 1074017 3 97677 863794 10.16 961471 4 103999 834916 11.08 938915 5 75004 941309 7.38 1016313 6 51011 1034286 4.70 1085297 7 39421 1192230 3.20 1231651 8 47462 1155291 3.95 1202753 9 28746 1084075 2.58 1112821 10 28099 1054605 2.60 1082704 11 31044 1004428 3.00 1035472 12 29964 988377 2.94 1018341 13 25900 1005495 2.51 1031395 14 23501 983858 2.33 1007359 15 27290 963788 2.75 991078 16 33766 927503 3.51 961269 17 22739 918601 2.42 941340 18 22217 919795 2.36 942012 19 23146 921267 2.45 944413 20 22192 911102 2.38 933294 21 21722 867817 2.44 889539 22 18804 867625 2.12 886429 23 19567 861848 2.22 881415 24 17740 852077 2.04 869817 25 18407 851795 2.12 870202 26 17296 836925 2.02 854221 27 16817 825981 2.00 842798 28 16153 823986 1.92 840139 29 15930 810905 1.93 826835 30 14998 799120 1.84 814118 31 15279 791109 1.89 806388 32 14967 771506 1.90 786473 33 14379 764351 1.85 778730 34 13897 751321 1.82 765218 35 13718 736357 1.83 750075 36 12967 727287 1.75 740254 37 13645 723797 1.85 737442 38 12693 710257 1.76 722950 39 13082 699690 1.84 712772 40 12075 684902 1.73 696977 41 12601 688389 1.80 700990 42 11423 664931 1.69 676354 43 12233 658754 1.82 670987 44 11325 649955 1.71 661280 45 11707 645907 1.78 657614 46 11023 633399 1.71 644422 47 11284 623332 1.78 634616 48 10725 610166 1.73 620891 49 11177 603393 1.82 614570 50 10634 594820 1.76 605454 51 10450 584548 1.76 594998 52 10289 571180 1.77 581469 53 10310 564308 1.79 574618 54 10130 554382 1.79 564512 55 9902 543923 1.79 553825 56 9805 539193 1.79 548998 57 9989 525622 1.86 535611 58 9527 527252 1.77 536779 59 9668 520165 1.82 529833 60 8866 503826 1.73 512692 61 9317 496959 1.84 506276 62 9005 494917 1.79 503922 63 8867 477501 1.82 486368 64 8561 470531 1.79 479092 65 9157 462842 1.94 471999 66 8132 455285 1.75 463417 67 8696 456875 1.87 465571 68 8202 443832 1.81 452034 69 8246 442094 1.83 450340 70 7844 433033 1.78 440877 71 8047 424077 1.86 432124 72 7682 418710 1.80 426392 73 7891 415275 1.86 423166 74 7613 412299 1.81 419912 75 7500 400056 1.84 407556 76 7308 392176 1.83 399484 77 7234 390800 1.82 398034 78 7104 389070 1.79 396174 79 7061 381729 1.82 388790 80 6856 371870 1.81 378726 81 6845 367110 1.83 373955 82 6937 365775 1.86 372712 83 6776 353068 1.88 359844 84 6320 347672 1.79 353992 85 6573 340872 1.89 347445 86 6191 335725 1.81 341916 87 6492 331022 1.92 337514 88 6141 329181 1.83 335322 89 6317 324724 1.91 331041 90 5891 316114 1.83 322005 91 6031 314039 1.88 320070 92 5798 308787 1.84 314585 93 5897 302309 1.91 308206 94 5699 300373 1.86 306072 95 5590 295806 1.85 301396 96 5411 294839 1.80 300250 97 5459 290602 1.84 296061 98 5491 279680 1.93 285171 99 5111 274230 1.83 279341 100 5199 269846 1.89 275045 101 5084 266303 1.87 271387 102 4931 265195 1.83 270126 103 5148 263218 1.92 268366 104 4838 256001 1.85 260839 105 4853 256860 1.85 261713 106 4685 248147 1.85 252832 107 4685 242921 1.89 247606 108 4325 242069 1.76 246394 109 4607 234446 1.93 239053 110 4239 231292 1.80 235531 111 4568 231744 1.93 236312 112 4263 225788 1.85 230051 113 4349 222115 1.92 226464 114 4188 218650 1.88 222838 115 4179 214621 1.91 218800 116 4099 210834 1.91 214933 117 3961 207564 1.87 211525 118 3973 204419 1.91 208392 119 3823 200447 1.87 204270 120 3824 196402 1.91 200226 121 3740 193661 1.89 197401 122 3777 191100 1.94 194877 123 3612 187536 1.89 191148 124 3625 184430 1.93 188055 125 3633 181819 1.96 185452 126 3439 178290 1.89 181729 127 3495 176124 1.95 179619 128 3323 171706 1.90 175029 129 3282 170535 1.89 173817 130 3297 168475 1.92 171772 131 3309 166397 1.95 169706 132 3124 163716 1.87 166840 133 3200 159993 1.96 163193 134 3023 158156 1.88 161179 135 3045 155529 1.92 158574 136 2943 154049 1.87 156992 137 2994 151998 1.93 154992 138 2921 149907 1.91 152828 139 2978 146724 1.99 149702 140 2817 143048 1.93 145865 141 2750 140454 1.92 143204 142 2742 139101 1.93 141843 143 2608 137003 1.87 139611 144 2690 135074 1.95 137764 145 2604 133105 1.92 135709 146 2572 131141 1.92 133713 147 2628 129634 1.99 132262 148 2596 127648 1.99 130244 149 2511 125006 1.97 127517 150 2508 123267 1.99 125775