CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 221008 487844 31.18 708852 2 296848 835454 26.22 1132302 3 261561 937166 21.82 1198727 4 184137 827308 18.21 1011445 5 139249 1046330 11.75 1185579 6 97561 632410 13.37 729971 7 95517 575617 14.23 671134 8 108615 619210 14.92 727825 9 113237 618210 15.48 731447 10 121466 590338 17.06 711804 11 138021 619676 18.22 757697 12 165310 622566 20.98 787876 13 155725 623194 19.99 778919 14 136700 622317 18.01 759017 15 136516 608163 18.33 744679 16 140916 621093 18.49 762009 17 157372 657592 19.31 814964 18 141508 628837 18.37 770345 19 140260 612734 18.63 752994 20 144725 620679 18.91 765404 21 145429 634351 18.65 779780 22 145022 628853 18.74 773875 23 143827 622443 18.77 766270 24 144990 630589 18.69 775579 25 148198 638998 18.83 787196 26 149072 623797 19.29 772869 27 147483 630705 18.95 778188 28 145677 625742 18.88 771419 29 145495 620126 19.00 765621 30 144099 622528 18.80 766627 31 145289 630912 18.72 776201 32 145117 620817 18.95 765934 33 144529 621380 18.87 765909 34 145929 617974 19.10 763903 35 146719 623821 19.04 770540 36 146070 643566 18.50 789636 37 146167 617962 19.13 764129 38 147540 624831 19.10 772371 39 146744 627548 18.95 774292 40 143992 606441 19.19 750433 41 147701 614567 19.38 762268 42 146421 620081 19.10 766502 43 147099 612036 19.38 759135 44 149574 618083 19.48 767657 45 145970 612212 19.25 758182 46 146493 608238 19.41 754731 47 146386 606209 19.45 752595 48 147215 613029 19.36 760244 49 147223 609901 19.45 757124 50 146456 613221 19.28 759677 51 146433 611800 19.31 758233 52 142249 603025 19.09 745274 53 142251 594643 19.30 736894 54 142212 598336 19.20 740548 55 141858 598517 19.16 740375 56 142827 595308 19.35 738135 57 144689 608895 19.20 753584 58 142042 595985 19.25 738027 59 142449 596929 19.27 739378 60 141306 597346 19.13 738652 61 139565 587333 19.20 726898 62 138018 581860 19.17 719878 63 138299 581526 19.21 719825 64 138508 582269 19.22 720777 65 139816 581773 19.38 721589 66 139667 585226 19.27 724893 67 142775 579494 19.77 722269 68 137906 578808 19.24 716714 69 137424 581905 19.10 719329 70 136163 570668 19.26 706831 71 135240 562046 19.40 697286 72 134248 562642 19.26 696890 73 133902 557520 19.37 691422 74 134938 555798 19.54 690736 75 132611 553979 19.31 686590 76 131638 547178 19.39 678816 77 131336 546366 19.38 677702 78 130861 546403 19.32 677264 79 130098 537925 19.48 668023 80 130319 542556 19.37 672875 81 130666 540955 19.46 671621 82 129157 537123 19.38 666280 83 129363 534812 19.48 664175 84 128723 538673 19.29 667396 85 125783 524198 19.35 649981 86 124435 524596 19.17 649031 87 125069 518021 19.45 643090 88 126653 522868 19.50 649521 89 124380 518823 19.34 643203 90 123064 516712 19.24 639776 91 122801 510176 19.40 632977 92 120500 505454 19.25 625954 93 121719 507273 19.35 628992 94 118031 489573 19.43 607604 95 116856 490256 19.25 607112 96 116023 489213 19.17 605236 97 113735 477592 19.23 591327 98 113242 476993 19.19 590235 99 112109 473727 19.14 585836 100 112537 472399 19.24 584936 101 112674 472618 19.25 585292 102 110810 473402 18.97 584212 103 108947 460575 19.13 569522 104 109213 455615 19.34 564828 105 108992 454682 19.34 563674 106 107763 453445 19.20 561208 107 106131 447776 19.16 553907 108 106154 451853 19.02 558007 109 106079 445223 19.24 551302 110 104171 438907 19.18 543078 111 103035 437837 19.05 540872 112 101238 428980 19.09 530218 113 102958 428485 19.37 531443 114 103564 425781 19.56 529345 115 101056 418058 19.47 519114 116 99707 420184 19.18 519891 117 96949 417316 18.85 514265 118 95058 409862 18.83 504920 119 95443 410390 18.87 505833 120 94790 404674 18.98 499464 121 93506 399118 18.98 492624 122 94630 398093 19.21 492723 123 92387 390248 19.14 482635 124 94508 389768 19.52 484276 125 97743 393642 19.89 491385 126 91724 384356 19.27 476080 127 89341 378308 19.10 467649 128 88013 374597 19.03 462610 129 87035 367793 19.14 454828 130 87115 366205 19.22 453320 131 86818 363558 19.28 450376 132 84699 359617 19.06 444316 133 83623 354379 19.09 438002 134 83161 351966 19.11 435127 135 81845 348336 19.03 430181 136 84465 347617 19.55 432082 137 83721 344622 19.55 428343 138 81427 340974 19.28 422401 139 83064 339709 19.65 422773 140 81384 338837 19.37 420221 141 77849 329662 19.10 407511 142 75813 324643 18.93 400456 143 74736 322996 18.79 397732 144 74424 318513 18.94 392937 145 73978 316763 18.93 390741 146 74597 320321 18.89 394918 147 75767 324798 18.92 400565 148 73426 315781 18.87 389207 149 71305 308609 18.77 379914 150 68878 302727 18.54 371605 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 431534 1805893 19.29 2237427 2 142872 587523 19.56 730395 3 160066 888393 15.27 1048459 4 124373 960017 11.47 1084390 5 73540 1463535 4.78 1537075 6 56682 1813473 3.03 1870155 7 43637 1027478 4.07 1071115 8 43532 996368 4.19 1039900 9 43371 1012439 4.11 1055810 10 49146 978159 4.78 1027305 11 65209 995963 6.14 1061172 12 44249 1045899 4.06 1090148 13 47132 1060906 4.25 1108038 14 41978 1051908 3.84 1093886 15 44555 1021722 4.18 1066277 16 48373 1029534 4.49 1077907 17 43797 1054629 3.99 1098426 18 46115 1120888 3.95 1167003 19 42125 1018290 3.97 1060415 20 42402 1039020 3.92 1081422 21 41990 1034586 3.90 1076576 22 41017 1043623 3.78 1084640 23 41870 1043609 3.86 1085479 24 39882 1040402 3.69 1080284 25 41602 1055132 3.79 1096734 26 40892 1051334 3.74 1092226 27 40590 1047639 3.73 1088229 28 40063 1045693 3.69 1085756 29 40246 1045243 3.71 1085489 30 39872 1045132 3.67 1085004 31 40760 1038202 3.78 1078962 32 39487 1028212 3.70 1067699 33 40581 1051080 3.72 1091661 34 40500 1053560 3.70 1094060 35 40324 1054309 3.68 1094633 36 39749 1029074 3.72 1068823 37 41193 1057491 3.75 1098684 38 39128 1035068 3.64 1074196 39 41258 1055447 3.76 1096705 40 39666 1026917 3.72 1066583 41 40513 1058250 3.69 1098763 42 39628 1051444 3.63 1091072 43 41366 1052973 3.78 1094339 44 38973 1025761 3.66 1064734 45 40590 1031624 3.79 1072214 46 39320 1018917 3.72 1058237 47 39977 1010755 3.80 1050732 48 39626 1018074 3.75 1057700 49 40687 1033493 3.79 1074180 50 40081 1026083 3.76 1066164 51 40493 1030023 3.78 1070516 52 39977 1017008 3.78 1056985 53 40797 1014883 3.86 1055680 54 39361 997131 3.80 1036492 55 40490 1012982 3.84 1053472 56 40019 1011292 3.81 1051311 57 40681 1007835 3.88 1048516 58 40576 994650 3.92 1035226 59 40540 990465 3.93 1031005 60 40324 997175 3.89 1037499 61 41048 1005561 3.92 1046609 62 40596 992936 3.93 1033532 63 40491 979220 3.97 1019711 64 40883 979571 4.01 1020454 65 41153 981828 4.02 1022981 66 40301 979320 3.95 1019621 67 41711 990034 4.04 1031745 68 40564 968936 4.02 1009500 69 41054 966311 4.08 1007365 70 40901 970796 4.04 1011697 71 40869 958462 4.09 999331 72 40651 957614 4.07 998265 73 40928 951972 4.12 992900 74 40341 943862 4.10 984203 75 40709 945572 4.13 986281 76 40467 943227 4.11 983694 77 40845 930165 4.21 971010 78 40139 919958 4.18 960097 79 40962 921939 4.25 962901 80 39786 911806 4.18 951592 81 40623 919694 4.23 960317 82 40514 903383 4.29 943897 83 40779 898173 4.34 938952 84 39879 894100 4.27 933979 85 41241 897422 4.39 938663 86 40013 886091 4.32 926104 87 40151 877452 4.38 917603 88 40985 875146 4.47 916131 89 40542 865791 4.47 906333 90 40563 873246 4.44 913809 91 40744 859861 4.52 900605 92 40262 848960 4.53 889222 93 40409 866592 4.46 907001 94 40865 897954 4.35 938819 95 39880 823712 4.62 863592 96 39405 812030 4.63 851435 97 38958 819541 4.54 858499 98 38480 800525 4.59 839005 99 39085 797301 4.67 836386 100 39096 794536 4.69 833632 101 38969 799782 4.65 838751 102 39254 838971 4.47 878225 103 38406 780324 4.69 818730 104 37540 763427 4.69 800967 105 37637 756423 4.74 794060 106 37418 748229 4.76 785647 107 37376 740406 4.81 777782 108 37104 731905 4.82 769009 109 37453 727226 4.90 764679 110 36578 718978 4.84 755556 111 36550 720252 4.83 756802 112 36881 715834 4.90 752715 113 36684 703340 4.96 740024 114 36268 699944 4.93 736212 115 36334 685918 5.03 722252 116 36169 678924 5.06 715093 117 35496 680112 4.96 715608 118 35204 672496 4.97 707700 119 35515 667321 5.05 702836 120 35251 659053 5.08 694304 121 35434 656169 5.12 691603 122 34841 646141 5.12 680982 123 34814 648481 5.10 683295 124 34441 632202 5.17 666643 125 35028 632704 5.25 667732 126 34212 622617 5.21 656829 127 34961 621838 5.32 656799 128 33999 613216 5.25 647215 129 34027 611234 5.27 645261 130 33927 597051 5.38 630978 131 33524 590979 5.37 624503 132 33355 592573 5.33 625928 133 33498 591853 5.36 625351 134 33285 583670 5.40 616955 135 33017 574105 5.44 607122 136 32592 567450 5.43 600042 137 32607 570391 5.41 602998 138 32370 564726 5.42 597096 139 32008 553794 5.46 585802 140 31728 542633 5.52 574361 141 31401 543073 5.47 574474 142 31349 538945 5.50 570294 143 30349 525344 5.46 555693 144 30833 523927 5.56 554760 145 30998 519767 5.63 550765 146 30866 522035 5.58 552901 147 30374 512946 5.59 543320 148 30728 503754 5.75 534482 149 30770 503815 5.76 534585 150 30389 499338 5.74 529727 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 630143 1370583 31.50 2000726 2 678730 1826424 27.09 2505154 3 614365 1690401 26.66 2304766 4 491385 2032652 19.47 2524037 5 284316 2569071 9.96 2853387 6 237748 3109487 7.10 3347235 7 243040 3854289 5.93 4097329 8 246128 3818279 6.06 4064407 9 217456 3579937 5.73 3797393 10 206776 3519983 5.55 3726759 11 222446 3470581 6.02 3693027 12 207176 3483456 5.61 3690632 13 209384 3624390 5.46 3833774 14 200961 3604093 5.28 3805054 15 212561 3557834 5.64 3770395 16 211024 3431868 5.79 3642892 17 201787 3436146 5.55 3637933 18 195279 3503368 5.28 3698647 19 210119 3561357 5.57 3771476 20 199668 3576421 5.29 3776089 21 200622 3425873 5.53 3626495 22 192166 3450811 5.27 3642977 23 198915 3474130 5.42 3673045 24 186432 3463651 5.11 3650083 25 194917 3530194 5.23 3725111 26 188266 3532933 5.06 3721199 27 190284 3538171 5.10 3728455 28 184353 3595988 4.88 3780341 29 189279 3603965 4.99 3793244 30 182327 3601538 4.82 3783865 31 190615 3641514 4.97 3832129 32 184569 3551410 4.94 3735979 33 185908 3582137 4.93 3768045 34 182829 3607204 4.82 3790033 35 185405 3583602 4.92 3769007 36 177849 3585617 4.73 3763466 37 184907 3603025 4.88 3787932 38 181868 3585451 4.83 3767319 39 182665 3558292 4.88 3740957 40 178776 3550051 4.79 3728827 41 185115 3693365 4.77 3878480 42 176258 3565409 4.71 3741667 43 183191 3586087 4.86 3769278 44 178403 3598318 4.72 3776721 45 181632 3623827 4.77 3805459 46 179589 3608476 4.74 3788065 47 183691 3626115 4.82 3809806 48 177355 3575487 4.73 3752842 49 181688 3613035 4.79 3794723 50 179300 3616332 4.72 3795632 51 181655 3614625 4.79 3796280 52 177874 3583550 4.73 3761424 53 180933 3591486 4.80 3772419 54 177039 3548635 4.75 3725674 55 180714 3530275 4.87 3710989 56 178967 3555159 4.79 3734126 57 177524 3544911 4.77 3722435 58 179018 3620712 4.71 3799730 59 181484 3626483 4.77 3807967 60 173585 3517646 4.70 3691231 61 176393 3511522 4.78 3687915 62 177151 3569084 4.73 3746235 63 176815 3436813 4.89 3613628 64 174130 3434035 4.83 3608165 65 176040 3428684 4.88 3604724 66 171861 3449121 4.75 3620982 67 178515 3499596 4.85 3678111 68 172104 3418649 4.79 3590753 69 175219 3477833 4.80 3653052 70 174390 3416696 4.86 3591086 71 175640 3378145 4.94 3553785 72 171156 3375683 4.83 3546839 73 174327 3399072 4.88 3573399 74 173756 3448258 4.80 3622014 75 171040 3345985 4.86 3517025 76 171114 3320360 4.90 3491474 77 172057 3341167 4.90 3513224 78 171821 3404040 4.81 3575861 79 174035 3367316 4.91 3541351 80 169518 3284092 4.91 3453610 81 169914 3292237 4.91 3462151 82 171232 3307248 4.92 3478480 83 170829 3201878 5.07 3372707 84 166323 3174776 4.98 3341099 85 168413 3153003 5.07 3321416 86 167403 3155659 5.04 3323062 87 167967 3130376 5.09 3298343 88 166911 3166942 5.01 3333853 89 169905 3146567 5.12 3316472 90 164462 3053227 5.11 3217689 91 167199 3055742 5.19 3222941 92 164269 3039883 5.13 3204152 93 162179 3011969 5.11 3174148 94 162515 3009690 5.12 3172205 95 163650 3004314 5.17 3167964 96 164148 3047262 5.11 3211410 97 164597 3018703 5.17 3183300 98 161291 2909840 5.25 3071131 99 159262 2877227 5.24 3036489 100 160085 2856734 5.31 3016819 101 160716 2853901 5.33 3014617 102 159009 2853938 5.28 3012947 103 161410 2878488 5.31 3039898 104 158434 2812794 5.33 2971228 105 157968 2841792 5.27 2999760 106 155350 2750054 5.35 2905404 107 156258 2728004 5.42 2884262 108 155120 2741955 5.35 2897075 109 154359 2659687 5.49 2814046 110 153161 2657322 5.45 2810483 111 154724 2690322 5.44 2845046 112 151309 2625024 5.45 2776333 113 151636 2589618 5.53 2741254 114 150566 2579855 5.51 2730421 115 150291 2543653 5.58 2693944 116 149193 2515799 5.60 2664992 117 148409 2494350 5.62 2642759 118 148553 2469281 5.67 2617834 119 147517 2451285 5.68 2598802 120 145147 2430297 5.64 2575444 121 145116 2406070 5.69 2551186 122 145767 2391179 5.75 2536946 123 143757 2350377 5.76 2494134 124 142754 2332360 5.77 2475114 125 143761 2309829 5.86 2453590 126 139771 2279878 5.78 2419649 127 141656 2266638 5.88 2408294 128 138731 2232117 5.85 2370848 129 138284 2212110 5.88 2350394 130 137353 2191438 5.90 2328791 131 138196 2183958 5.95 2322154 132 135603 2145205 5.95 2280808 133 135973 2125861 6.01 2261834 134 135053 2100927 6.04 2235980 135 132978 2078586 6.01 2211564 136 132840 2059613 6.06 2192453 137 133161 2051211 6.10 2184372 138 130904 2035007 6.04 2165911 139 131073 2005439 6.13 2136512 140 129235 1969076 6.16 2098311 141 128011 1948083 6.17 2076094 142 128096 1932984 6.21 2061080 143 126853 1912372 6.22 2039225 144 125179 1897599 6.19 2022778 145 125286 1880537 6.25 2005823 146 123591 1861358 6.23 1984949 147 121872 1846894 6.19 1968766 148 122848 1831184 6.29 1954032 149 124181 1814726 6.40 1938907 150 122087 1792448 6.38 1914535 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 109048 252943 30.12 361991 2 140866 401446 25.98 542312 3 117338 440045 21.05 557383 4 89950 385626 18.91 475576 5 63613 461515 12.11 525128 6 46257 293156 13.63 339413 7 44221 263219 14.38 307440 8 50968 277870 15.50 328838 9 51631 272487 15.93 324118 10 55535 262770 17.45 318305 11 63729 264914 19.39 328643 12 81294 265565 23.44 346859 13 77837 266891 22.58 344728 14 58770 261426 18.35 320196 15 57827 253663 18.56 311490 16 59163 254304 18.87 313467 17 64975 270070 19.39 335045 18 58043 255344 18.52 313387 19 57257 245852 18.89 303109 20 57742 246076 19.01 303818 21 56580 247966 18.58 304546 22 56462 242997 18.85 299459 23 54926 236239 18.86 291165 24 55349 238332 18.85 293681 25 56297 238925 19.07 295222 26 55532 229376 19.49 284908 27 54192 229363 19.11 283555 28 53098 222708 19.25 275806 29 51636 219152 19.07 270788 30 51083 215656 19.15 266739 31 51092 219983 18.85 271075 32 49816 212473 18.99 262289 33 49741 209637 19.18 259378 34 50156 206778 19.52 256934 35 49024 205407 19.27 254431 36 48307 206945 18.93 255252 37 47828 199985 19.30 247813 38 47907 197619 19.51 245526 39 46806 196997 19.20 243803 40 45743 187642 19.60 233385 41 46140 187686 19.73 233826 42 45808 187744 19.61 233552 43 45174 183080 19.79 228254 44 45391 181166 20.04 226557 45 43660 179170 19.59 222830 46 43337 176096 19.75 219433 47 42951 172906 19.90 215857 48 42316 171602 19.78 213918 49 42443 170208 19.96 212651 50 41942 167492 20.03 209434 51 41117 165891 19.86 207008 52 39753 161544 19.75 201297 53 39452 157843 20.00 197295 54 38771 157214 19.78 195985 55 38745 155117 19.99 193862 56 37996 151890 20.01 189886 57 38341 154297 19.90 192638 58 37414 150288 19.93 187702 59 36989 148197 19.97 185186 60 36279 146068 19.90 182347 61 35481 141039 20.10 176520 62 34801 139018 20.02 173819 63 34633 136843 20.20 171476 64 34074 135555 20.09 169629 65 34478 133847 20.48 168325 66 33884 132524 20.36 166408 67 33920 131302 20.53 165222 68 32962 128723 20.39 161685 69 32423 128533 20.14 160956 70 31744 123774 20.41 155518 71 31432 121376 20.57 152808 72 31329 120915 20.58 152244 73 30524 118358 20.50 148882 74 31073 116256 21.09 147329 75 29943 115198 20.63 145141 76 29636 112250 20.89 141886 77 29156 111714 20.70 140870 78 28620 110311 20.60 138931 79 28709 107704 21.05 136413 80 28672 106628 21.19 135300 81 28302 106070 21.06 134372 82 28135 104317 21.24 132452 83 27545 103015 21.10 130560 84 27324 102532 21.04 129856 85 26461 99560 21.00 126021 86 26285 97368 21.26 123653 87 26013 96038 21.31 122051 88 26440 96840 21.45 123280 89 25407 95942 20.94 121349 90 25016 94347 20.96 119363 91 24798 91935 21.24 116733 92 24437 90169 21.32 114606 93 24619 89887 21.50 114506 94 23569 87013 21.31 110582 95 23454 85916 21.44 109370 96 23232 85407 21.38 108639 97 22718 82276 21.64 104994 98 22099 82038 21.22 104137 99 21980 80785 21.39 102765 100 21909 79712 21.56 101621 101 21802 79072 21.61 100874 102 21043 78805 21.08 99848 103 21065 76696 21.55 97761 104 20636 75211 21.53 95847 105 20781 74395 21.83 95176 106 20433 73710 21.70 94143 107 19383 71819 21.25 91202 108 19854 72050 21.60 91904 109 19625 70591 21.75 90216 110 19172 69110 21.72 88282 111 18729 68561 21.46 87290 112 18283 66248 21.63 84531 113 18544 66536 21.80 85080 114 18565 64896 22.24 83461 115 18325 63946 22.27 82271 116 17728 63948 21.71 81676 117 17387 63175 21.58 80562 118 16817 61787 21.39 78604 119 16795 61158 21.55 77953 120 16791 60470 21.73 77261 121 16658 58812 22.07 75470 122 16411 58636 21.87 75047 123 15696 57055 21.57 72751 124 16172 56616 22.22 72788 125 17046 57337 22.92 74383 126 15676 55121 22.14 70797 127 15337 53951 22.14 69288 128 15101 53359 22.06 68460 129 14745 52051 22.07 66796 130 14783 51405 22.33 66188 131 14576 51036 22.22 65612 132 14181 50020 22.09 64201 133 13917 49438 21.97 63355 134 13871 48408 22.27 62279 135 13713 47761 22.31 61474 136 13453 47125 22.21 60578 137 13564 46405 22.62 59969 138 13288 46202 22.34 59490 139 13479 45757 22.75 59236 140 13050 45326 22.36 58376 141 12684 43877 22.43 56561 142 12295 43138 22.18 55433 143 12130 42363 22.26 54493 144 11999 41804 22.30 53803 145 12020 41013 22.67 53033 146 11924 42032 22.10 53956 147 12097 42116 22.31 54213 148 11433 40574 21.98 52007 149 11237 39846 22.00 51083 150 10861 38561 21.98 49422 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 215288 864206 19.94 1079494 2 78609 303112 20.59 381721 3 89722 406065 18.10 495787 4 68522 451600 13.17 520122 5 46796 651876 6.70 698672 6 31900 776943 3.94 808843 7 26951 457867 5.56 484818 8 26600 436948 5.74 463548 9 26383 439849 5.66 466232 10 30709 415515 6.88 446224 11 43476 416970 9.44 460446 12 27297 436645 5.88 463942 13 29338 439320 6.26 468658 14 25130 439519 5.41 464649 15 26973 413745 6.12 440718 16 29869 407248 6.83 437117 17 25236 419303 5.68 444539 18 27372 446447 5.78 473819 19 24363 391575 5.86 415938 20 24446 397720 5.79 422166 21 23436 390446 5.66 413882 22 23014 391132 5.56 414146 23 22987 387418 5.60 410405 24 22031 377889 5.51 399920 25 22464 380320 5.58 402784 26 21860 375036 5.51 396896 27 21252 366972 5.47 388224 28 21240 363813 5.52 385053 29 20925 361964 5.47 382889 30 20717 354772 5.52 375489 31 20703 346521 5.64 367224 32 20332 337453 5.68 357785 33 20327 343883 5.58 364210 34 19690 340075 5.47 359765 35 20184 334452 5.69 354636 36 19745 324721 5.73 344466 37 20116 330500 5.74 350616 38 19433 318514 5.75 337947 39 19506 319951 5.75 339457 40 18909 306047 5.82 324956 41 19221 312081 5.80 331302 42 18774 306034 5.78 324808 43 18781 303534 5.83 322315 44 18252 290420 5.91 308672 45 18111 291379 5.85 309490 46 17850 282585 5.94 300435 47 18246 277608 6.17 295854 48 17736 276232 6.03 293968 49 18130 276234 6.16 294364 50 17620 272019 6.08 289639 51 17625 269474 6.14 287099 52 17286 261471 6.20 278757 53 17220 258106 6.25 275326 54 16941 252394 6.29 269335 55 16868 251850 6.28 268718 56 16672 248599 6.28 265271 57 16925 246152 6.43 263077 58 16611 238994 6.50 255605 59 16637 235784 6.59 252421 60 16011 235132 6.38 251143 61 16459 233367 6.59 249826 62 15910 228785 6.50 244695 63 16002 223374 6.68 239376 64 15570 220581 6.59 236151 65 15702 220526 6.65 236228 66 15299 216803 6.59 232102 67 15560 215349 6.74 230909 68 14957 209916 6.65 224873 69 14948 206584 6.75 221532 70 14969 205574 6.79 220543 71 15070 200655 6.99 215725 72 14492 198372 6.81 212864 73 14766 196332 6.99 211098 74 14463 192649 6.98 207112 75 14322 191502 6.96 205824 76 14082 188877 6.94 202959 77 14069 184222 7.10 198291 78 13809 181122 7.08 194931 79 13989 179063 7.25 193052 80 13721 176432 7.22 190153 81 13559 175694 7.16 189253 82 13493 170041 7.35 183534 83 13430 168346 7.39 181776 84 13073 166101 7.30 179174 85 13335 165640 7.45 178975 86 13187 162215 7.52 175402 87 12793 159489 7.43 172282 88 13065 158505 7.61 171570 89 12718 155972 7.54 168690 90 12935 154369 7.73 167304 91 12935 151504 7.87 164439 92 12786 148394 7.93 161180 93 12473 149891 7.68 162364 94 12475 153221 7.53 165696 95 11997 140747 7.85 152744 96 11883 137869 7.94 149752 97 11694 138080 7.81 149774 98 11777 133903 8.08 145680 99 11654 132418 8.09 144072 100 11619 131142 8.14 142761 101 11531 131509 8.06 143040 102 11665 136263 7.89 147928 103 10987 126133 8.01 137120 104 11036 123043 8.23 134079 105 10873 120702 8.26 131575 106 11105 118929 8.54 130034 107 10779 118265 8.35 129044 108 10567 115264 8.40 125831 109 10745 113155 8.67 123900 110 10481 111528 8.59 122009 111 10297 110690 8.51 120987 112 10114 109746 8.44 119860 113 10291 106600 8.80 116891 114 10131 105921 8.73 116052 115 9975 103629 8.78 113604 116 10142 101150 9.11 111292 117 9733 101375 8.76 111108 118 9693 100408 8.80 110101 119 9720 97696 9.05 107416 120 9342 96121 8.86 105463 121 9321 95267 8.91 104588 122 9420 93612 9.14 103032 123 9387 92868 9.18 102255 124 9202 90877 9.19 100079 125 9273 90563 9.29 99836 126 8858 88560 9.09 97418 127 8983 87506 9.31 96489 128 8800 86525 9.23 95325 129 8898 85052 9.47 93950 130 8727 82744 9.54 91471 131 8730 81358 9.69 90088 132 8560 81133 9.54 89693 133 8560 79724 9.70 88284 134 8552 78485 9.83 87037 135 8373 77168 9.79 85541 136 8101 76223 9.61 84324 137 8286 75800 9.85 84086 138 8046 73966 9.81 82012 139 8036 72932 9.92 80968 140 7719 71257 9.77 78976 141 7770 70418 9.94 78188 142 7670 69588 9.93 77258 143 7715 68051 10.18 75766 144 7553 67220 10.10 74773 145 7550 66225 10.23 73775 146 7319 66358 9.93 73677 147 7403 64840 10.25 72243 148 7263 62980 10.34 70243 149 7308 63100 10.38 70408 150 7085 62256 10.22 69341 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 335975 755264 30.79 1091239 2 373342 959984 28.00 1333326 3 347484 897234 27.92 1244718 4 285839 1065867 21.15 1351706 5 173394 1241615 12.25 1415009 6 142561 1444461 8.98 1587022 7 136722 1753551 7.23 1890273 8 146802 1706879 7.92 1853681 9 122129 1585747 7.15 1707876 10 117761 1541734 7.10 1659495 11 127651 1493818 7.87 1621469 12 119016 1481524 7.44 1600540 13 116154 1531087 7.05 1647241 14 112139 1513578 6.90 1625717 15 118549 1490268 7.37 1608817 16 122069 1410023 7.97 1532092 17 108749 1403313 7.19 1512062 18 106743 1415023 7.01 1521766 19 113008 1425266 7.35 1538274 20 108027 1416115 7.09 1524142 21 106127 1342018 7.33 1448145 22 100310 1341709 6.96 1442019 23 101716 1339961 7.06 1441677 24 95560 1333642 6.69 1429202 25 97113 1336624 6.77 1433737 26 95274 1323614 6.71 1418888 27 93062 1306662 6.65 1399724 28 89870 1312105 6.41 1401975 29 91199 1297526 6.57 1388725 30 88167 1289339 6.40 1377506 31 90407 1284607 6.57 1375014 32 87992 1244809 6.60 1332801 33 87141 1240781 6.56 1327922 34 85759 1228417 6.53 1314176 35 85768 1209769 6.62 1295537 36 83191 1199761 6.48 1282952 37 84732 1193270 6.63 1278002 38 83379 1169994 6.65 1253373 39 82087 1149479 6.67 1231566 40 80916 1132685 6.67 1213601 41 82033 1154615 6.63 1236648 42 78942 1113204 6.62 1192146 43 80333 1105233 6.78 1185566 44 78468 1092631 6.70 1171099 45 78963 1086492 6.78 1165455 46 78206 1070331 6.81 1148537 47 78138 1060023 6.87 1138161 48 76216 1038112 6.84 1114328 49 76005 1031144 6.86 1107149 50 74778 1019665 6.83 1094443 51 74979 1006911 6.93 1081890 52 73350 989500 6.90 1062850 53 74007 981013 7.01 1055020 54 73365 962580 7.08 1035945 55 73166 946907 7.17 1020073 56 72146 939747 7.13 1011893 57 70866 923538 7.13 994404 58 71016 935200 7.06 1006216 59 70868 925913 7.11 996781 60 68565 894045 7.12 962610 61 68644 880659 7.23 949303 62 68217 883700 7.17 951917 63 67730 849050 7.39 916780 64 66292 838981 7.32 905273 65 66665 829169 7.44 895834 66 65410 824570 7.35 889980 67 66888 830167 7.46 897055 68 64583 804101 7.43 868684 69 64745 804194 7.45 868939 70 64458 788146 7.56 852604 71 63726 774871 7.60 838597 72 62161 766803 7.50 828964 73 62531 764361 7.56 826892 74 62822 765592 7.58 828414 75 60888 740563 7.60 801451 76 60754 723748 7.74 784502 77 60461 724782 7.70 785243 78 60145 730589 7.61 790734 79 60099 716592 7.74 776691 80 58677 696678 7.77 755355 81 58414 692115 7.78 750529 82 58278 689651 7.79 747929 83 57456 665483 7.95 722939 84 55846 654502 7.86 710348 85 56250 645953 8.01 702203 86 56299 640878 8.08 697177 87 56063 632806 8.14 688869 88 54857 631059 8.00 685916 89 55244 623963 8.13 679207 90 53890 603111 8.20 657001 91 54243 599358 8.30 653601 92 53055 592957 8.21 646012 93 51842 583204 8.16 635046 94 51832 578007 8.23 629839 95 51601 572983 8.26 624584 96 52021 574648 8.30 626669 97 51105 566059 8.28 617164 98 50438 542698 8.50 593136 99 49685 535088 8.50 584773 100 49417 527584 8.56 577001 101 49026 524344 8.55 573370 102 48673 518365 8.58 567038 103 48305 517312 8.54 565617 104 47778 504445 8.65 552223 105 47452 507321 8.55 554773 106 46221 487575 8.66 533796 107 46526 479454 8.85 525980 108 45714 480017 8.70 525731 109 45483 463915 8.93 509398 110 44810 461806 8.84 506616 111 45036 462614 8.87 507650 112 44437 449856 8.99 494293 113 44238 441733 9.10 485971 114 43046 437672 8.95 480718 115 43089 429132 9.12 472221 116 42645 423194 9.15 465839 117 42433 416273 9.25 458706 118 41617 408879 9.24 450496 119 41616 403513 9.35 445129 120 40483 396588 9.26 437071 121 40505 392043 9.36 432548 122 40415 386352 9.47 426767 123 39847 379257 9.51 419104 124 39351 375468 9.49 414819 125 39719 368457 9.73 408176 126 38194 361975 9.54 400169 127 38523 357621 9.72 396144 128 37730 349971 9.73 387701 129 37512 347312 9.75 384824 130 36995 341390 9.78 378385 131 37029 339840 9.83 376869 132 36048 331813 9.80 367861 133 36048 328401 9.89 364449 134 35542 322647 9.92 358189 135 35453 318403 10.02 353856 136 34690 314472 9.94 349162 137 34893 309888 10.12 344781 138 34342 307038 10.06 341380 139 33964 301186 10.13 335150 140 33782 292821 10.34 326603 141 33421 287777 10.41 321198 142 33251 284771 10.46 318022 143 32569 280999 10.39 313568 144 31848 277968 10.28 309816 145 32368 274453 10.55 306821 146 32183 269663 10.66 301846 147 31405 265673 10.57 297078 148 31110 262304 10.60 293414 149 30788 258000 10.66 288788 150 30606 253236 10.78 283842