EF05-EM05-Zygote_R1_001.fastp-trim.20220827_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 5950148 lines in total Total number of methylation call strings processed: 11900296 Final Cytosine Methylation Report ================================= Total number of C's analysed: 69329707 Total methylated C's in CpG context: 1159377 Total methylated C's in CHG context: 309785 Total methylated C's in CHH context: 1981841 Total C to T conversions in CpG context: 7746647 Total C to T conversions in CHG context: 12426863 Total C to T conversions in CHH context: 45705194 C methylated in CpG context: 13.0% C methylated in CHG context: 2.4% C methylated in CHH context: 4.2%