CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 177319 319453 35.69 496772 2 231419 533929 30.24 765348 3 205418 633388 24.49 838806 4 136273 590853 18.74 727126 5 103202 748206 12.12 851408 6 74541 464211 13.84 538752 7 76293 422119 15.31 498412 8 87389 461916 15.91 549305 9 92189 471277 16.36 563466 10 96573 450008 17.67 546581 11 112517 477019 19.09 589536 12 135480 473399 22.25 608879 13 120478 479647 20.08 600125 14 107868 481138 18.31 589006 15 107899 477670 18.43 585569 16 108777 481387 18.43 590164 17 114998 495644 18.83 610642 18 109298 489107 18.26 598405 19 109683 480925 18.57 590608 20 113646 490170 18.82 603816 21 114289 501595 18.56 615884 22 113746 497270 18.62 611016 23 113158 497199 18.54 610357 24 114373 502923 18.53 617296 25 115076 499296 18.73 614372 26 115708 492229 19.03 607937 27 114941 497283 18.77 612224 28 114608 489548 18.97 604156 29 113813 491854 18.79 605667 30 112931 495044 18.57 607975 31 113301 497127 18.56 610428 32 113872 495249 18.69 609121 33 114311 495257 18.75 609568 34 114347 493284 18.82 607631 35 115105 494887 18.87 609992 36 114805 510467 18.36 625272 37 114045 488323 18.93 602368 38 115792 497336 18.89 613128 39 114457 496128 18.75 610585 40 113193 483305 18.98 596498 41 116292 488666 19.22 604958 42 114806 494603 18.84 609409 43 115295 487386 19.13 602681 44 116883 491136 19.22 608019 45 114539 485752 19.08 600291 46 113457 481165 19.08 594622 47 114440 481578 19.20 596018 48 114957 484890 19.16 599847 49 113465 479018 19.15 592483 50 114607 484386 19.13 598993 51 113162 479898 19.08 593060 52 111056 477143 18.88 588199 53 111594 470641 19.17 582235 54 111047 469962 19.11 581009 55 110754 468618 19.12 579372 56 110773 467079 19.17 577852 57 110823 469256 19.10 580079 58 108385 462191 19.00 570576 59 108344 460404 19.05 568748 60 107271 459978 18.91 567249 61 105591 449211 19.03 554802 62 105149 447172 19.04 552321 63 104941 448344 18.97 553285 64 104618 445890 19.00 550508 65 104682 442634 19.13 547316 66 104187 442731 19.05 546918 67 104542 435315 19.36 539857 68 101840 434806 18.98 536646 69 100976 434661 18.85 535637 70 100395 426803 19.04 527198 71 100304 417546 19.37 517850 72 97903 418370 18.96 516273 73 96991 408836 19.17 505827 74 96958 406254 19.27 503212 75 95128 402536 19.11 497664 76 94108 397718 19.13 491826 77 93348 396252 19.07 489600 78 92216 391185 19.08 483401 79 90822 384444 19.11 475266 80 90499 384600 19.05 475099 81 89712 380330 19.09 470042 82 88696 374369 19.15 463065 83 88394 371721 19.21 460115 84 86200 372424 18.80 458624 85 84259 361367 18.91 445626 86 83948 360879 18.87 444827 87 83023 351714 19.10 434737 88 82685 352000 19.02 434685 89 80608 346706 18.86 427314 90 79833 344881 18.80 424714 91 78541 336620 18.92 415161 92 77566 330837 18.99 408403 93 76782 329811 18.88 406593 94 74311 318476 18.92 392787 95 72788 315681 18.74 388469 96 72050 312645 18.73 384695 97 70089 305467 18.66 375556 98 68866 301266 18.61 370132 99 68258 296945 18.69 365203 100 67297 293977 18.63 361274 101 67151 291020 18.75 358171 102 65429 290328 18.39 355757 103 64745 278786 18.85 343531 104 63512 275508 18.73 339020 105 62663 272311 18.71 334974 106 61227 267845 18.61 329072 107 60023 263652 18.54 323675 108 59105 264465 18.27 323570 109 58796 256352 18.66 315148 110 57295 251852 18.53 309147 111 56392 249031 18.46 305423 112 55584 244120 18.55 299704 113 55318 241692 18.62 297010 114 54836 237643 18.75 292479 115 53374 233668 18.59 287042 116 52091 231342 18.38 283433 117 51099 227759 18.32 278858 118 49256 222883 18.10 272139 119 48657 222017 17.98 270674 120 48406 215201 18.36 263607 121 47251 211394 18.27 258645 122 46707 208806 18.28 255513 123 45475 204529 18.19 250004 124 45192 200488 18.39 245680 125 45930 199494 18.71 245424 126 43317 196251 18.08 239568 127 42339 189928 18.23 232267 128 41545 187821 18.11 229366 129 40743 182045 18.29 222788 130 39751 179979 18.09 219730 131 39236 177445 18.11 216681 132 38470 174022 18.10 212492 133 37691 168405 18.29 206096 134 37095 166643 18.21 203738 135 36358 163703 18.17 200061 136 36510 161595 18.43 198105 137 35588 159393 18.25 194981 138 34466 157182 17.98 191648 139 34617 154095 18.34 188712 140 33358 151500 18.05 184858 141 31883 147224 17.80 179107 142 30813 143531 17.67 174344 143 30221 142203 17.53 172424 144 29459 139511 17.43 168970 145 29347 136805 17.66 166152 146 28871 136382 17.47 165253 147 29627 136672 17.82 166299 148 28002 132394 17.46 160396 149 27166 128959 17.40 156125 150 26166 125667 17.23 151833 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 268258 1256332 17.60 1524590 2 121519 418967 22.48 540486 3 123968 651131 15.99 775099 4 82433 678204 10.84 760637 5 35275 1087224 3.14 1122499 6 21019 1325943 1.56 1346962 7 17789 773644 2.25 791433 8 19839 768526 2.52 788365 9 17033 789362 2.11 806395 10 22837 773462 2.87 796299 11 38817 786279 4.70 825096 12 15872 820439 1.90 836311 13 15280 846306 1.77 861586 14 12079 833193 1.43 845272 15 13613 807318 1.66 820931 16 16157 818103 1.94 834260 17 12290 839992 1.44 852282 18 12914 872145 1.46 885059 19 11226 816211 1.36 827437 20 11313 836901 1.33 848214 21 10517 834406 1.24 844923 22 9929 850067 1.15 859996 23 9679 849960 1.13 859639 24 9750 842829 1.14 852579 25 9562 846694 1.12 856256 26 9168 837917 1.08 847085 27 9414 839165 1.11 848579 28 9193 846625 1.07 855818 29 9116 845695 1.07 854811 30 8894 849944 1.04 858838 31 8900 848045 1.04 856945 32 8877 839751 1.05 848628 33 9090 853485 1.05 862575 34 9008 851811 1.05 860819 35 9165 853071 1.06 862236 36 8996 833913 1.07 842909 37 8872 855199 1.03 864071 38 8787 841501 1.03 850288 39 9216 858420 1.06 867636 40 8977 835090 1.06 844067 41 9023 855887 1.04 864910 42 9050 846534 1.06 855584 43 9154 849514 1.07 858668 44 9219 834414 1.09 843633 45 9389 837567 1.11 846956 46 9071 831499 1.08 840570 47 9370 817091 1.13 826461 48 9564 821482 1.15 831046 49 9758 833715 1.16 843473 50 9788 823304 1.17 833092 51 10143 824186 1.22 834329 52 10050 819552 1.21 829602 53 10181 816053 1.23 826234 54 10144 800839 1.25 810983 55 10585 812587 1.29 823172 56 10473 801602 1.29 812075 57 10726 800410 1.32 811136 58 10850 792164 1.35 803014 59 10844 786172 1.36 797016 60 11100 791429 1.38 802529 61 11190 790926 1.40 802116 62 11181 782596 1.41 793777 63 11389 767199 1.46 778588 64 11222 763264 1.45 774486 65 11452 758224 1.49 769676 66 11582 755538 1.51 767120 67 11953 756665 1.56 768618 68 11622 740618 1.54 752240 69 11850 739538 1.58 751388 70 12009 741566 1.59 753575 71 12068 725611 1.64 737679 72 12089 721303 1.65 733392 73 12196 713215 1.68 725411 74 12314 704309 1.72 716623 75 12362 699778 1.74 712140 76 12232 691458 1.74 703690 77 12258 681472 1.77 693730 78 12334 671515 1.80 683849 79 12374 669234 1.82 681608 80 12392 656532 1.85 668924 81 12691 666352 1.87 679043 82 12500 643273 1.91 655773 83 12475 637708 1.92 650183 84 12506 624585 1.96 637091 85 12396 625522 1.94 637918 86 12307 610924 1.97 623231 87 12614 605962 2.04 618576 88 12310 597619 2.02 609929 89 12184 586606 2.03 598790 90 12048 588282 2.01 600330 91 12506 580295 2.11 592801 92 12154 565466 2.10 577620 93 12257 566935 2.12 579192 94 12288 566122 2.12 578410 95 11856 537519 2.16 549375 96 11887 530005 2.19 541892 97 12067 529348 2.23 541415 98 11728 512901 2.24 524629 99 11655 508279 2.24 519934 100 11753 503476 2.28 515229 101 11455 498753 2.25 510208 102 11602 509595 2.23 521197 103 11416 480389 2.32 491805 104 11300 471369 2.34 482669 105 10996 460572 2.33 471568 106 10739 452664 2.32 463403 107 10654 443989 2.34 454643 108 10823 438464 2.41 449287 109 10619 429985 2.41 440604 110 10416 423537 2.40 433953 111 10568 420972 2.45 431540 112 10388 414275 2.45 424663 113 10181 405289 2.45 415470 114 9944 400355 2.42 410299 115 10100 389120 2.53 399220 116 9701 381345 2.48 391046 117 9664 378310 2.49 387974 118 9511 370390 2.50 379901 119 9531 364945 2.55 374476 120 9421 359122 2.56 368543 121 9217 353175 2.54 362392 122 9163 345163 2.59 354326 123 9200 345277 2.60 354477 124 9083 332731 2.66 341814 125 8813 330598 2.60 339411 126 8682 322683 2.62 331365 127 8663 320826 2.63 329489 128 8595 310919 2.69 319514 129 8321 308079 2.63 316400 130 8472 298834 2.76 307306 131 8242 293092 2.74 301334 132 8176 292078 2.72 300254 133 8089 288728 2.73 296817 134 8049 280842 2.79 288891 135 7943 276278 2.79 284221 136 7762 269612 2.80 277374 137 7477 268443 2.71 275920 138 7364 260300 2.75 267664 139 7273 255948 2.76 263221 140 7065 250127 2.75 257192 141 6659 246036 2.64 252695 142 6596 241810 2.66 248406 143 6373 234436 2.65 240809 144 6120 233972 2.55 240092 145 6039 227969 2.58 234008 146 5968 227336 2.56 233304 147 5767 221381 2.54 227148 148 6169 216908 2.77 223077 149 6378 213724 2.90 220102 150 6186 210088 2.86 216274 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 472925 1015080 31.78 1488005 2 466916 1315860 26.19 1782776 3 389667 1209506 24.37 1599173 4 310013 1392236 18.21 1702249 5 156617 1828877 7.89 1985494 6 129261 2179174 5.60 2308435 7 113086 2672770 4.06 2785856 8 122138 2637717 4.43 2759855 9 89126 2502988 3.44 2592114 10 80946 2428001 3.23 2508947 11 92206 2381118 3.73 2473324 12 81170 2392637 3.28 2473807 13 77718 2460373 3.06 2538091 14 71170 2450437 2.82 2521607 15 81131 2426917 3.23 2508048 16 83769 2369516 3.41 2453285 17 74671 2366218 3.06 2440889 18 70526 2386278 2.87 2456804 19 78360 2407503 3.15 2485863 20 70835 2421863 2.84 2492698 21 72473 2369764 2.97 2442237 22 64206 2384420 2.62 2448626 23 70002 2408490 2.82 2478492 24 61523 2392303 2.51 2453826 25 66738 2428528 2.67 2495266 26 60332 2434345 2.42 2494677 27 63936 2447185 2.55 2511121 28 58818 2484155 2.31 2542973 29 63042 2497565 2.46 2560607 30 56961 2479412 2.25 2536373 31 62079 2489454 2.43 2551533 32 57085 2454522 2.27 2511607 33 58444 2464672 2.32 2523116 34 54858 2483783 2.16 2538641 35 57213 2467906 2.27 2525119 36 52200 2463807 2.07 2516007 37 56722 2474928 2.24 2531650 38 52526 2462841 2.09 2515367 39 55216 2451150 2.20 2506366 40 50207 2445931 2.01 2496138 41 53997 2509652 2.11 2563649 42 48864 2450995 1.95 2499859 43 54445 2460429 2.16 2514874 44 49625 2468225 1.97 2517850 45 53555 2472167 2.12 2525722 46 49192 2467526 1.95 2516718 47 53119 2471697 2.10 2524816 48 48772 2439612 1.96 2488384 49 52179 2455276 2.08 2507455 50 49628 2454537 1.98 2504165 51 52899 2445965 2.12 2498864 52 49517 2425873 2.00 2475390 53 51772 2416342 2.10 2468114 54 48192 2395828 1.97 2444020 55 50643 2378670 2.08 2429313 56 49517 2383945 2.03 2433462 57 51547 2362367 2.14 2413914 58 50079 2385310 2.06 2435389 59 52731 2380895 2.17 2433626 60 47550 2327005 2.00 2374555 61 50235 2312316 2.13 2362551 62 48892 2327931 2.06 2376823 63 50720 2258640 2.20 2309360 64 48649 2249555 2.12 2298204 65 51135 2235436 2.24 2286571 66 47019 2230671 2.06 2277690 67 50536 2234345 2.21 2284881 68 47460 2189072 2.12 2236532 69 49915 2201528 2.22 2251443 70 48616 2170338 2.19 2218954 71 50765 2142019 2.32 2192784 72 48077 2121550 2.22 2169627 73 49265 2116579 2.27 2165844 74 48142 2123082 2.22 2171224 75 48315 2069514 2.28 2117829 76 47584 2047091 2.27 2094675 77 48732 2041321 2.33 2090053 78 47780 2044818 2.28 2092598 79 48657 2014128 2.36 2062785 80 46746 1970640 2.32 2017386 81 47164 1959167 2.35 2006331 82 46095 1944644 2.32 1990739 83 48045 1895242 2.47 1943287 84 45034 1862386 2.36 1907420 85 46359 1839673 2.46 1886032 86 44930 1827752 2.40 1872682 87 45866 1798398 2.49 1844264 88 44418 1791110 2.42 1835528 89 46017 1769451 2.53 1815468 90 43749 1723073 2.48 1766822 91 45500 1709676 2.59 1755176 92 44541 1689376 2.57 1733917 93 44210 1662530 2.59 1706740 94 43366 1647891 2.56 1691257 95 44034 1631940 2.63 1675974 96 42809 1631083 2.56 1673892 97 43778 1601584 2.66 1645362 98 42766 1552424 2.68 1595190 99 41690 1523122 2.66 1564812 100 41782 1499229 2.71 1541011 101 41689 1486603 2.73 1528292 102 40207 1473061 2.66 1513268 103 41271 1464336 2.74 1505607 104 39849 1434276 2.70 1474125 105 40601 1422117 2.78 1462718 106 38905 1381242 2.74 1420147 107 38849 1354036 2.79 1392885 108 37691 1344616 2.73 1382307 109 38373 1306000 2.85 1344373 110 37204 1293782 2.80 1330986 111 37641 1291508 2.83 1329149 112 36863 1256283 2.85 1293146 113 36760 1232909 2.90 1269669 114 35729 1219188 2.85 1254917 115 36135 1196923 2.93 1233058 116 35164 1177652 2.90 1212816 117 35010 1154669 2.94 1189679 118 34515 1131864 2.96 1166379 119 34547 1115204 3.00 1149751 120 33494 1095595 2.97 1129089 121 33342 1077081 3.00 1110423 122 33213 1059412 3.04 1092625 123 32455 1036756 3.04 1069211 124 31610 1019253 3.01 1050863 125 31787 1003334 3.07 1035121 126 30375 982127 3.00 1012502 127 30450 969461 3.05 999911 128 29499 948013 3.02 977512 129 29182 931993 3.04 961175 130 28625 916141 3.03 944766 131 29479 902907 3.16 932386 132 27782 882873 3.05 910655 133 28345 867267 3.16 895612 134 27051 850909 3.08 877960 135 26821 832350 3.12 859171 136 26375 819257 3.12 845632 137 26342 807665 3.16 834007 138 25296 794265 3.09 819561 139 25276 779494 3.14 804770 140 24437 759245 3.12 783682 141 24087 745664 3.13 769751 142 23951 732614 3.17 756565 143 22908 719057 3.09 741965 144 22404 702853 3.09 725257 145 22307 694886 3.11 717193 146 21359 684021 3.03 705380 147 20642 677616 2.96 698258 148 21435 666373 3.12 687808 149 22345 656554 3.29 678899 150 21145 643046 3.18 664191 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 43570 86245 33.56 129815 2 54199 132037 29.10 186236 3 45748 151324 23.21 197072 4 30569 141440 17.77 172009 5 21835 166138 11.62 187973 6 15609 103060 13.15 118669 7 15108 94039 13.84 109147 8 18279 100689 15.36 118968 9 17926 99582 15.26 117508 10 18962 94645 16.69 113607 11 23859 95892 19.92 119751 12 33721 94106 26.38 127827 13 27949 93927 22.93 121876 14 18067 92268 16.37 110335 15 17984 90619 16.56 108603 16 18442 89805 17.04 108247 17 19290 94817 16.91 114107 18 17554 87665 16.68 105219 19 17484 86352 16.84 103836 20 17640 86267 16.98 103907 21 17221 86794 16.56 104015 22 16603 83758 16.54 100361 23 15840 81437 16.28 97277 24 15667 81735 16.08 97402 25 16224 79585 16.93 95809 26 15591 76949 16.85 92540 27 15135 75613 16.68 90748 28 14558 73115 16.60 87673 29 14568 71895 16.85 86463 30 13766 70871 16.26 84637 31 13692 70228 16.32 83920 32 13382 68519 16.34 81901 33 13271 67511 16.43 80782 34 13005 65933 16.47 78938 35 12844 64781 16.55 77625 36 12231 65527 15.73 77758 37 12174 61661 16.49 73835 38 11921 60994 16.35 72915 39 11775 59541 16.51 71316 40 11513 57190 16.76 68703 41 11420 57556 16.56 68976 42 11022 56048 16.43 67070 43 10872 54918 16.53 65790 44 10985 53990 16.91 64975 45 10497 52250 16.73 62747 46 10121 51093 16.53 61214 47 9951 50083 16.58 60034 48 9990 49341 16.84 59331 49 9764 48070 16.88 57834 50 9526 47194 16.79 56720 51 9357 46242 16.83 55599 52 8719 45112 16.20 53831 53 8566 44524 16.13 53090 54 8650 42874 16.79 51524 55 8478 42566 16.61 51044 56 8157 41669 16.37 49826 57 8301 41323 16.73 49624 58 7841 40033 16.38 47874 59 7750 38989 16.58 46739 60 7436 38611 16.15 46047 61 7285 37035 16.44 44320 62 7131 36520 16.34 43651 63 6882 35145 16.38 42027 64 6809 34833 16.35 41642 65 6767 33770 16.69 40537 66 6714 33711 16.61 40425 67 6910 32995 17.32 39905 68 6233 31952 16.32 38185 69 6072 32019 15.94 38091 70 6023 30833 16.34 36856 71 5925 30009 16.49 35934 72 5847 29755 16.42 35602 73 5688 28486 16.64 34174 74 5571 27809 16.69 33380 75 5574 27471 16.87 33045 76 5387 26931 16.67 32318 77 5209 26000 16.69 31209 78 5085 25597 16.57 30682 79 5003 24820 16.78 29823 80 4886 24720 16.50 29606 81 4807 24493 16.41 29300 82 4734 23806 16.59 28540 83 4660 23162 16.75 27822 84 4586 22539 16.91 27125 85 4464 22446 16.59 26910 86 4230 21789 16.26 26019 87 4148 21353 16.27 25501 88 4237 21362 16.55 25599 89 4010 20564 16.32 24574 90 3939 20073 16.40 24012 91 3940 19320 16.94 23260 92 3771 18715 16.77 22486 93 3831 19020 16.77 22851 94 3640 17691 17.06 21331 95 3528 17453 16.82 20981 96 3527 17593 16.70 21120 97 3212 16593 16.22 19805 98 3297 16372 16.76 19669 99 3145 16145 16.30 19290 100 3050 15740 16.23 18790 101 3120 15909 16.40 19029 102 3066 15374 16.63 18440 103 2841 14702 16.19 17543 104 2845 14234 16.66 17079 105 2911 14040 17.17 16951 106 2787 13749 16.85 16536 107 2624 13455 16.32 16079 108 2591 13525 16.08 16116 109 2567 13098 16.39 15665 110 2434 12611 16.18 15045 111 2427 12551 16.20 14978 112 2334 11903 16.39 14237 113 2357 11955 16.47 14312 114 2245 11692 16.11 13937 115 2394 11295 17.49 13689 116 2179 11044 16.48 13223 117 2181 11041 16.50 13222 118 2150 10705 16.73 12855 119 1891 10487 15.28 12378 120 1965 10191 16.16 12156 121 2001 9812 16.94 11813 122 1802 9855 15.46 11657 123 1855 9448 16.41 11303 124 1901 9364 16.88 11265 125 1913 9238 17.16 11151 126 1784 9208 16.23 10992 127 1669 8510 16.40 10179 128 1634 8487 16.14 10121 129 1676 8278 16.84 9954 130 1671 8098 17.11 9769 131 1517 7857 16.18 9374 132 1510 7774 16.26 9284 133 1381 7434 15.67 8815 134 1390 7368 15.87 8758 135 1415 7267 16.30 8682 136 1415 7122 16.57 8537 137 1359 7088 16.09 8447 138 1316 6902 16.01 8218 139 1418 6781 17.29 8199 140 1264 6582 16.11 7846 141 1262 6427 16.41 7689 142 1182 6152 16.12 7334 143 1114 6092 15.46 7206 144 1168 6023 16.24 7191 145 1067 5924 15.26 6991 146 1180 6065 16.29 7245 147 1115 6032 15.60 7147 148 1033 5602 15.57 6635 149 951 5437 14.89 6388 150 1000 5319 15.83 6319 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 68577 314120 17.92 382697 2 32785 109087 23.11 141872 3 36466 148505 19.71 184971 4 21946 157836 12.21 179782 5 13645 237333 5.44 250978 6 6580 282078 2.28 288658 7 5391 166262 3.14 171653 8 6347 161972 3.77 168319 9 5220 165764 3.05 170984 10 8457 155477 5.16 163934 11 18591 152097 10.89 170688 12 4981 159010 3.04 163991 13 5346 161197 3.21 166543 14 3191 161801 1.93 164992 15 4093 147983 2.69 152076 16 6322 145376 4.17 151698 17 3058 149618 2.00 152676 18 3818 159341 2.34 163159 19 2927 137563 2.08 140490 20 2964 141749 2.05 144713 21 2556 136358 1.84 138914 22 2120 138363 1.51 140483 23 1955 135723 1.42 137678 24 1863 130422 1.41 132285 25 1800 129745 1.37 131545 26 1700 125680 1.33 127380 27 1721 123911 1.37 125632 28 1685 122625 1.36 124310 29 1398 120299 1.15 121697 30 1286 120988 1.05 122274 31 1305 115130 1.12 116435 32 1239 110971 1.10 112210 33 1233 112231 1.09 113464 34 1137 110127 1.02 111264 35 1074 107719 0.99 108793 36 1004 103876 0.96 104880 37 1058 104771 1.00 105829 38 997 100041 0.99 101038 39 978 101809 0.95 102787 40 932 95613 0.97 96545 41 933 96463 0.96 97396 42 882 93440 0.94 94322 43 873 92110 0.94 92983 44 833 87280 0.95 88113 45 794 87720 0.90 88514 46 805 84562 0.94 85367 47 778 81868 0.94 82646 48 778 80867 0.95 81645 49 848 80291 1.05 81139 50 742 78781 0.93 79523 51 762 77673 0.97 78435 52 736 74663 0.98 75399 53 701 72873 0.95 73574 54 666 70193 0.94 70859 55 706 70192 1.00 70898 56 693 69060 0.99 69753 57 673 67780 0.98 68453 58 652 65193 0.99 65845 59 646 63706 1.00 64352 60 669 64167 1.03 64836 61 614 62349 0.98 62963 62 611 61150 0.99 61761 63 586 58925 0.98 59511 64 563 57399 0.97 57962 65 558 56597 0.98 57155 66 537 55381 0.96 55918 67 570 54929 1.03 55499 68 543 53201 1.01 53744 69 535 52744 1.00 53279 70 517 51753 0.99 52270 71 541 50170 1.07 50711 72 471 50102 0.93 50573 73 490 48122 1.01 48612 74 458 47497 0.96 47955 75 478 46149 1.03 46627 76 528 45543 1.15 46071 77 456 44298 1.02 44754 78 416 42618 0.97 43034 79 425 42648 0.99 43073 80 462 41410 1.10 41872 81 449 41315 1.08 41764 82 409 38930 1.04 39339 83 414 39131 1.05 39545 84 424 37329 1.12 37753 85 390 36983 1.04 37373 86 365 35774 1.01 36139 87 396 35479 1.10 35875 88 387 34836 1.10 35223 89 349 33833 1.02 34182 90 321 33944 0.94 34265 91 359 33113 1.07 33472 92 352 31728 1.10 32080 93 367 31934 1.14 32301 94 346 32251 1.06 32597 95 336 29405 1.13 29741 96 325 29038 1.11 29363 97 313 28862 1.07 29175 98 304 27320 1.10 27624 99 304 27183 1.11 27487 100 310 26583 1.15 26893 101 278 26307 1.05 26585 102 329 27654 1.18 27983 103 278 24935 1.10 25213 104 265 24574 1.07 24839 105 261 23648 1.09 23909 106 260 23049 1.12 23309 107 243 22282 1.08 22525 108 240 22111 1.07 22351 109 277 21336 1.28 21613 110 242 20996 1.14 21238 111 222 20916 1.05 21138 112 203 20637 0.97 20840 113 215 19538 1.09 19753 114 223 19687 1.12 19910 115 197 18882 1.03 19079 116 212 18280 1.15 18492 117 209 18179 1.14 18388 118 207 17863 1.15 18070 119 220 17602 1.23 17822 120 189 17055 1.10 17244 121 185 16937 1.08 17122 122 203 16135 1.24 16338 123 166 16354 1.00 16520 124 162 15510 1.03 15672 125 172 15556 1.09 15728 126 176 14766 1.18 14942 127 161 14996 1.06 15157 128 156 14634 1.05 14790 129 144 14193 1.00 14337 130 143 13593 1.04 13736 131 147 13288 1.09 13435 132 128 13288 0.95 13416 133 161 13292 1.20 13453 134 134 12416 1.07 12550 135 148 12769 1.15 12917 136 115 12220 0.93 12335 137 119 12053 0.98 12172 138 130 11562 1.11 11692 139 135 11495 1.16 11630 140 130 11067 1.16 11197 141 111 10852 1.01 10963 142 135 10686 1.25 10821 143 117 10163 1.14 10280 144 100 10325 0.96 10425 145 107 10153 1.04 10260 146 101 10360 0.97 10461 147 100 9738 1.02 9838 148 131 9222 1.40 9353 149 120 9249 1.28 9369 150 129 9218 1.38 9347 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 123821 280299 30.64 404120 2 126908 351489 26.53 478397 3 103785 317014 24.66 420799 4 84088 356371 19.09 440459 5 51522 434807 10.59 486329 6 44632 499137 8.21 543769 7 30287 609816 4.73 640103 8 42093 580096 6.77 622189 9 20559 546010 3.63 566569 10 19589 518643 3.64 538232 11 23607 486075 4.63 509682 12 21960 480142 4.37 502102 13 16739 494385 3.27 511124 14 15818 486372 3.15 502190 15 18577 479746 3.73 498323 16 25315 446155 5.37 471470 17 15039 445557 3.27 460596 18 15808 438450 3.48 454258 19 16965 439690 3.72 456655 20 15654 432473 3.49 448127 21 14629 412137 3.43 426766 22 11867 410201 2.81 422068 23 12342 408214 2.93 420556 24 10472 402968 2.53 413440 25 10845 400291 2.64 411136 26 9407 393406 2.34 402813 27 9446 388887 2.37 398333 28 8665 387053 2.19 395718 29 8859 380818 2.27 389677 30 7769 374113 2.03 381882 31 7938 368959 2.11 376897 32 7779 356238 2.14 364017 33 7368 352014 2.05 359382 34 6932 346814 1.96 353746 35 6996 336668 2.04 343664 36 6303 332227 1.86 338530 37 6766 326292 2.03 333058 38 6246 317217 1.93 323463 39 6363 311328 2.00 317691 40 5708 301957 1.86 307665 41 6062 304290 1.95 310352 42 5110 292488 1.72 297598 43 5992 288183 2.04 294175 44 5267 282306 1.83 287573 45 5651 279075 1.98 284726 46 4931 273190 1.77 278121 47 5530 267667 2.02 273197 48 4782 260018 1.81 264800 49 5080 256719 1.94 261799 50 4813 252590 1.87 257403 51 5026 248133 1.99 253159 52 4770 241522 1.94 246292 53 4708 236763 1.95 241471 54 4557 231523 1.93 236080 55 4578 224463 2.00 229041 56 4602 221361 2.04 225963 57 4531 215915 2.06 220446 58 4384 217282 1.98 221666 59 4501 214174 2.06 218675 60 3857 205479 1.84 209336 61 4179 199924 2.05 204103 62 4090 199272 2.01 203362 63 4156 190128 2.14 194284 64 3838 186895 2.01 190733 65 4073 182683 2.18 186756 66 3367 181002 1.83 184369 67 3981 179429 2.17 183410 68 3610 173715 2.04 177325 69 3728 172228 2.12 175956 70 3533 167405 2.07 170938 71 3768 162943 2.26 166711 72 3298 160662 2.01 163960 73 3432 159334 2.11 162766 74 3272 158448 2.02 161720 75 3282 151529 2.12 154811 76 3312 146721 2.21 150033 77 3045 144988 2.06 148033 78 3047 146468 2.04 149515 79 2996 142654 2.06 145650 80 2938 137488 2.09 140426 81 2992 135019 2.17 138011 82 2818 133705 2.06 136523 83 2942 128470 2.24 131412 84 2502 125295 1.96 127797 85 2673 122302 2.14 124975 86 2564 120753 2.08 123317 87 2629 116990 2.20 119619 88 2451 116567 2.06 119018 89 2611 114724 2.23 117335 90 2257 109989 2.01 112246 91 2506 108627 2.25 111133 92 2354 106500 2.16 108854 93 2276 104142 2.14 106418 94 2274 102812 2.16 105086 95 2289 101074 2.21 103363 96 1987 100686 1.94 102673 97 2130 98512 2.12 100642 98 2221 93486 2.32 95707 99 1942 91632 2.08 93574 100 2022 89723 2.20 91745 101 1976 87834 2.20 89810 102 1825 86874 2.06 88699 103 1886 85791 2.15 87677 104 1764 83279 2.07 85043 105 1817 82865 2.15 84682 106 1772 79181 2.19 80953 107 1732 77724 2.18 79456 108 1587 76484 2.03 78071 109 1777 73136 2.37 74913 110 1557 72442 2.10 73999 111 1662 72191 2.25 73853 112 1512 69429 2.13 70941 113 1511 68106 2.17 69617 114 1386 66880 2.03 68266 115 1484 65311 2.22 66795 116 1484 63796 2.27 65280 117 1352 62278 2.12 63630 118 1367 60509 2.21 61876 119 1384 59917 2.26 61301 120 1270 58077 2.14 59347 121 1293 56523 2.24 57816 122 1354 55612 2.38 56966 123 1155 54064 2.09 55219 124 1210 52999 2.23 54209 125 1245 51927 2.34 53172 126 1093 50520 2.12 51613 127 1149 49247 2.28 50396 128 1074 48270 2.18 49344 129 1096 47891 2.24 48987 130 1060 46505 2.23 47565 131 1123 45465 2.41 46588 132 909 44953 1.98 45862 133 1015 43393 2.29 44408 134 948 42607 2.18 43555 135 920 41600 2.16 42520 136 882 40841 2.11 41723 137 907 40101 2.21 41008 138 839 39638 2.07 40477 139 903 38771 2.28 39674 140 898 37304 2.35 38202 141 764 36375 2.06 37139 142 885 36098 2.39 36983 143 765 35118 2.13 35883 144 771 34403 2.19 35174 145 752 33778 2.18 34530 146 812 33142 2.39 33954 147 777 32835 2.31 33612 148 707 32554 2.13 33261 149 781 31464 2.42 32245 150 699 30755 2.22 31454