CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 181752 396616 31.42 578368 2 180482 599488 23.14 779970 3 155715 747341 17.24 903056 4 136305 607313 18.33 743618 5 127321 728326 14.88 855647 6 103459 547283 15.90 650742 7 106892 487942 17.97 594834 8 121736 527721 18.74 649457 9 132690 544698 19.59 677388 10 133915 520964 20.45 654879 11 150282 546283 21.57 696565 12 173472 547471 24.06 720943 13 160830 550016 22.63 710846 14 154431 548484 21.97 702915 15 155578 545313 22.20 700891 16 156259 549033 22.16 705292 17 158890 559461 22.12 718351 18 155444 564726 21.58 720170 19 152922 546871 21.85 699793 20 159348 563747 22.04 723095 21 163629 574826 22.16 738455 22 162339 568854 22.20 731193 23 163513 571747 22.24 735260 24 164933 579324 22.16 744257 25 165374 573543 22.38 738917 26 164955 565089 22.60 730044 27 163945 572065 22.27 736010 28 162349 562471 22.40 724820 29 161777 563320 22.31 725097 30 161730 569109 22.13 730839 31 162701 569930 22.21 732631 32 162255 569100 22.19 731355 33 162269 569040 22.19 731309 34 163308 566412 22.38 729720 35 164101 567731 22.42 731832 36 163006 578900 21.97 741906 37 162169 563611 22.34 725780 38 163896 569429 22.35 733325 39 162933 569983 22.23 732916 40 161390 557401 22.45 718791 41 164084 561338 22.62 725422 42 162547 562906 22.41 725453 43 162638 557197 22.59 719835 44 164569 560197 22.71 724766 45 161707 557016 22.50 718723 46 160080 552450 22.47 712530 47 160339 550219 22.57 710558 48 160591 554962 22.44 715553 49 159659 546585 22.61 706244 50 159083 548912 22.47 707995 51 157183 547405 22.31 704588 52 154354 538686 22.27 693040 53 154980 533887 22.50 688867 54 154615 534580 22.43 689195 55 152542 529397 22.37 681939 56 153018 526795 22.51 679813 57 152486 529260 22.37 681746 58 149620 522906 22.25 672526 59 149346 519055 22.34 668401 60 147744 518088 22.19 665832 61 145211 505747 22.31 650958 62 144702 503993 22.31 648695 63 143164 500425 22.24 643589 64 142802 497395 22.31 640197 65 141963 492977 22.36 634940 66 140092 493521 22.11 633613 67 140614 482601 22.56 623215 68 137066 482516 22.12 619582 69 136247 478024 22.18 614271 70 133438 469681 22.12 603119 71 132457 461662 22.29 594119 72 130573 459399 22.13 589972 73 128554 448875 22.26 577429 74 127247 444763 22.25 572010 75 125066 441772 22.06 566838 76 123223 434819 22.08 558042 77 122648 428525 22.25 551173 78 119721 423124 22.05 542845 79 119316 416683 22.26 535999 80 117146 414529 22.03 531675 81 116110 410482 22.05 526592 82 114469 402575 22.14 517044 83 112747 398881 22.04 511628 84 110762 396896 21.82 507658 85 108143 385641 21.90 493784 86 107170 380703 21.97 487873 87 105593 375315 21.96 480908 88 104631 371853 21.96 476484 89 102371 366704 21.82 469075 90 101578 361931 21.92 463509 91 99593 352667 22.02 452260 92 98072 347031 22.03 445103 93 96321 342663 21.94 438984 94 92701 331229 21.87 423930 95 91486 326631 21.88 418117 96 89372 323420 21.65 412792 97 87341 314664 21.73 402005 98 85714 310273 21.65 395987 99 85025 304903 21.81 389928 100 82465 299422 21.59 381887 101 81940 295852 21.69 377792 102 80140 291934 21.54 372074 103 78222 283441 21.63 361663 104 77049 278428 21.67 355477 105 75358 273578 21.60 348936 106 73724 268351 21.55 342075 107 72074 262109 21.57 334183 108 70663 260441 21.34 331104 109 70066 254067 21.62 324133 110 68051 249357 21.44 317408 111 67452 246668 21.47 314120 112 65612 239547 21.50 305159 113 64226 236250 21.37 300476 114 63427 231884 21.48 295311 115 61792 226344 21.45 288136 116 60340 222852 21.31 283192 117 58832 220249 21.08 279081 118 57103 213382 21.11 270485 119 56291 211620 21.01 267911 120 55249 205697 21.17 260946 121 54110 200460 21.26 254570 122 53046 196819 21.23 249865 123 52079 191652 21.37 243731 124 50838 187461 21.33 238299 125 50353 185746 21.33 236099 126 48327 180489 21.12 228816 127 47527 176487 21.22 224014 128 46351 172067 21.22 218418 129 44908 167904 21.10 212812 130 43893 164588 21.05 208481 131 43039 161683 21.02 204722 132 42265 158453 21.06 200718 133 41350 153945 21.17 195295 134 39966 150596 20.97 190562 135 39535 148884 20.98 188419 136 38970 145206 21.16 184176 137 38250 142531 21.16 180781 138 36779 138893 20.94 175672 139 36394 136837 21.01 173231 140 36011 134193 21.16 170204 141 34003 129906 20.75 163909 142 33262 126404 20.83 159666 143 32151 124887 20.47 157038 144 31598 122163 20.55 153761 145 31146 118974 20.75 150120 146 30565 117968 20.58 148533 147 29681 116486 20.31 146167 148 28891 114018 20.22 142909 149 28145 110244 20.34 138389 150 27233 108391 20.08 135624 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 305015 1837895 14.23 2142910 2 162366 689984 19.05 852350 3 138506 973928 12.45 1112434 4 117578 891947 11.65 1009525 5 62606 1153219 5.15 1215825 6 60134 1339652 4.30 1399786 7 50315 934577 5.11 984892 8 51860 929458 5.28 981318 9 52817 960388 5.21 1013205 10 55314 940446 5.55 995760 11 69249 944734 6.83 1013983 12 52494 987848 5.05 1040342 13 51892 1009558 4.89 1061450 14 48695 987755 4.70 1036450 15 50253 973785 4.91 1024038 16 52015 981221 5.03 1033236 17 48326 1004803 4.59 1053129 18 48528 1026337 4.51 1074865 19 47727 988571 4.61 1036298 20 48635 1005215 4.61 1053850 21 48809 1007821 4.62 1056630 22 48675 1023345 4.54 1072020 23 48157 1015919 4.53 1064076 24 47342 1007474 4.49 1054816 25 47807 1017770 4.49 1065577 26 47138 1004400 4.48 1051538 27 47023 1001310 4.49 1048333 28 47116 1018013 4.42 1065129 29 46773 1012720 4.41 1059493 30 46746 1018269 4.39 1065015 31 46717 1018956 4.38 1065673 32 46534 1009755 4.41 1056289 33 47813 1025563 4.45 1073376 34 47259 1023237 4.41 1070496 35 46733 1018125 4.39 1064858 36 46923 1006348 4.45 1053271 37 47874 1029495 4.44 1077369 38 47580 1010995 4.49 1058575 39 47788 1028286 4.44 1076074 40 46999 1011514 4.44 1058513 41 47755 1019914 4.47 1067669 42 47522 1011727 4.49 1059249 43 47662 1017169 4.48 1064831 44 46631 999742 4.46 1046373 45 47470 1005049 4.51 1052519 46 47464 996837 4.55 1044301 47 46818 985136 4.54 1031954 48 47217 983295 4.58 1030512 49 48006 997376 4.59 1045382 50 46867 978164 4.57 1025031 51 47008 978839 4.58 1025847 52 47105 975406 4.61 1022511 53 46983 974211 4.60 1021194 54 46854 955602 4.67 1002456 55 47268 962998 4.68 1010266 56 46286 949851 4.65 996137 57 46583 949673 4.68 996256 58 46330 939240 4.70 985570 59 46640 930807 4.77 977447 60 46245 930367 4.74 976612 61 46399 933734 4.73 980133 62 45727 914985 4.76 960712 63 45895 903845 4.83 949740 64 45780 899285 4.84 945065 65 44889 894163 4.78 939052 66 44970 884035 4.84 929005 67 45412 887943 4.87 933355 68 44282 865199 4.87 909481 69 43917 863005 4.84 906922 70 44142 858025 4.89 902167 71 42750 839682 4.84 882432 72 42801 831858 4.89 874659 73 42370 825988 4.88 868358 74 41978 811379 4.92 853357 75 42160 802762 4.99 844922 76 41573 792564 4.98 834137 77 40753 780356 4.96 821109 78 40543 768734 5.01 809277 79 40094 763290 4.99 803384 80 39320 748944 4.99 788264 81 39798 747968 5.05 787766 82 38889 726755 5.08 765644 83 38315 717240 5.07 755555 84 37943 705589 5.10 743532 85 37906 702948 5.12 740854 86 36926 686295 5.11 723221 87 36430 678682 5.09 715112 88 36042 668839 5.11 704881 89 35833 658838 5.16 694671 90 35724 651828 5.20 687552 91 35265 643359 5.20 678624 92 34086 627893 5.15 661979 93 33850 621404 5.17 655254 94 33488 614158 5.17 647646 95 32869 591985 5.26 624854 96 32366 580558 5.28 612924 97 32091 574933 5.29 607024 98 31115 559344 5.27 590459 99 31153 553079 5.33 584232 100 30528 544388 5.31 574916 101 29841 534827 5.28 564668 102 29904 532656 5.32 562560 103 29013 512337 5.36 541350 104 28041 498681 5.32 526722 105 27597 489660 5.34 517257 106 27143 481679 5.33 508822 107 26931 471953 5.40 498884 108 26022 463315 5.32 489337 109 25860 454415 5.38 480275 110 25266 446013 5.36 471279 111 25020 439006 5.39 464026 112 24761 431784 5.42 456545 113 24162 419711 5.44 443873 114 23792 412228 5.46 436020 115 23263 403423 5.45 426686 116 22899 394091 5.49 416990 117 22345 388296 5.44 410641 118 21841 380461 5.43 402302 119 21455 370467 5.47 391922 120 21337 364922 5.52 386259 121 20714 358758 5.46 379472 122 20393 347566 5.54 367959 123 20369 343996 5.59 364365 124 19918 334833 5.61 354751 125 19225 330119 5.50 349344 126 18996 322406 5.56 341402 127 18565 316954 5.53 335519 128 18170 308173 5.57 326343 129 17741 302888 5.53 320629 130 17426 294548 5.59 311974 131 16880 287680 5.54 304560 132 16746 283640 5.57 300386 133 16697 278455 5.66 295152 134 16082 270541 5.61 286623 135 15866 264992 5.65 280858 136 15218 259665 5.54 274883 137 15245 254634 5.65 269879 138 14723 247617 5.61 262340 139 14525 242686 5.65 257211 140 13914 235989 5.57 249903 141 13787 231780 5.61 245567 142 13361 225920 5.58 239281 143 13014 219732 5.59 232746 144 12695 218765 5.48 231460 145 12615 212004 5.62 224619 146 12309 208926 5.56 221235 147 12045 204816 5.55 216861 148 12122 200132 5.71 212254 149 12365 196831 5.91 209196 150 12017 192835 5.87 204852 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 803979 1930274 29.40 2734253 2 680809 2475718 21.57 3156527 3 570814 2342545 19.59 2913359 4 488539 2312368 17.44 2800907 5 285575 2708008 9.54 2993583 6 255210 2937952 7.99 3193162 7 257232 3276761 7.28 3533993 8 259058 3263602 7.35 3522660 9 236770 3136266 7.02 3373036 10 222602 3067589 6.77 3290191 11 232991 3016410 7.17 3249401 12 219204 3011624 6.78 3230828 13 217055 3063639 6.62 3280694 14 210738 3044841 6.47 3255579 15 218192 3016105 6.75 3234297 16 218908 2990508 6.82 3209416 17 203596 2964758 6.43 3168354 18 196994 2976052 6.21 3173046 19 207491 2987367 6.49 3194858 20 202990 3013830 6.31 3216820 21 202415 2964171 6.39 3166586 22 197597 2981472 6.22 3179069 23 203141 3000990 6.34 3204131 24 193511 2983341 6.09 3176852 25 200203 3009767 6.24 3209970 26 193488 3028930 6.00 3222418 27 194795 3028404 6.04 3223199 28 190142 3079646 5.82 3269788 29 194313 3099387 5.90 3293700 30 187006 3098301 5.69 3285307 31 194810 3105311 5.90 3300121 32 188419 3087094 5.75 3275513 33 191155 3089545 5.83 3280700 34 186900 3094233 5.70 3281133 35 189730 3086523 5.79 3276253 36 184047 3088562 5.62 3272609 37 189319 3104576 5.75 3293895 38 185003 3111947 5.61 3296950 39 187720 3097988 5.71 3285708 40 181892 3095423 5.55 3277315 41 187757 3151766 5.62 3339523 42 181178 3107347 5.51 3288525 43 186432 3104952 5.66 3291384 44 182191 3113298 5.53 3295489 45 185571 3114285 5.62 3299856 46 182100 3109216 5.53 3291316 47 185570 3108084 5.63 3293654 48 179611 3081235 5.51 3260846 49 183028 3084316 5.60 3267344 50 180889 3083219 5.54 3264108 51 181501 3066793 5.59 3248294 52 178032 3044523 5.52 3222555 53 180759 3038460 5.61 3219219 54 175463 3007709 5.51 3183172 55 176813 2988264 5.59 3165077 56 175585 2987316 5.55 3162901 57 174747 2952068 5.59 3126815 58 174916 2962336 5.58 3137252 59 176223 2949379 5.64 3125602 60 169429 2892679 5.53 3062108 61 170234 2874956 5.59 3045190 62 168794 2877082 5.54 3045876 63 166464 2811458 5.59 2977922 64 165392 2785404 5.60 2950796 65 166152 2763821 5.67 2929973 66 162134 2745212 5.58 2907346 67 163617 2740203 5.63 2903820 68 161785 2694373 5.66 2856158 69 160297 2684795 5.63 2845092 70 158883 2650403 5.66 2809286 71 158400 2607825 5.73 2766225 72 155027 2579914 5.67 2734941 73 154925 2564541 5.70 2719466 74 153117 2554323 5.66 2707440 75 150785 2495365 5.70 2646150 76 148514 2458468 5.70 2606982 77 149719 2441553 5.78 2591272 78 147062 2425746 5.72 2572808 79 145833 2385851 5.76 2531684 80 142530 2343898 5.73 2486428 81 140262 2310438 5.72 2450700 82 139974 2286842 5.77 2426816 83 138248 2234299 5.83 2372547 84 134843 2199604 5.78 2334447 85 133828 2166229 5.82 2300057 86 131995 2147918 5.79 2279913 87 131087 2108415 5.85 2239502 88 129001 2086600 5.82 2215601 89 128561 2055434 5.89 2183995 90 124715 2002107 5.86 2126822 91 124338 1977227 5.92 2101565 92 121946 1945426 5.90 2067372 93 120395 1913398 5.92 2033793 94 118752 1887669 5.92 2006421 95 117830 1861658 5.95 1979488 96 115590 1839210 5.91 1954800 97 114195 1804182 5.95 1918377 98 112062 1756259 6.00 1868321 99 109722 1721731 5.99 1831453 100 108240 1694368 6.00 1802608 101 107695 1667624 6.07 1775319 102 105063 1647829 5.99 1752892 103 104111 1627479 6.01 1731590 104 102702 1590484 6.07 1693186 105 101150 1567973 6.06 1669123 106 98718 1526543 6.07 1625261 107 97875 1495838 6.14 1593713 108 95077 1471840 6.07 1566917 109 94167 1437207 6.15 1531374 110 92637 1413184 6.15 1505821 111 91133 1396286 6.13 1487419 112 89557 1359778 6.18 1449335 113 88024 1331136 6.20 1419160 114 86055 1307996 6.17 1394051 115 85011 1278515 6.23 1363526 116 82939 1251701 6.21 1334640 117 81624 1226262 6.24 1307886 118 80013 1201189 6.25 1281202 119 79311 1180278 6.30 1259589 120 77744 1150246 6.33 1227990 121 75271 1126090 6.27 1201361 122 74200 1102947 6.30 1177147 123 72395 1077615 6.30 1150010 124 71747 1056716 6.36 1128463 125 70238 1037219 6.34 1107457 126 68157 1014266 6.30 1082423 127 67964 994167 6.40 1062131 128 65664 970215 6.34 1035879 129 64222 950078 6.33 1014300 130 63593 931628 6.39 995221 131 62980 914558 6.44 977538 132 61047 892502 6.40 953549 133 60063 873443 6.43 933506 134 58813 854937 6.44 913750 135 57038 836944 6.38 893982 136 56013 819459 6.40 875472 137 54811 803389 6.39 858200 138 53835 786060 6.41 839895 139 53271 768046 6.49 821317 140 51305 747602 6.42 798907 141 49869 730251 6.39 780120 142 49222 717810 6.42 767032 143 47951 700542 6.41 748493 144 47097 686902 6.42 733999 145 46660 674866 6.47 721526 146 45352 662458 6.41 707810 147 44358 650941 6.38 695299 148 44976 640926 6.56 685902 149 45549 629836 6.74 675385 150 43981 613713 6.69 657694 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 29099 78101 27.14 107200 2 28362 116185 19.62 144547 3 24082 139037 14.76 163119 4 21798 108409 16.74 130207 5 20740 130918 13.68 151658 6 16014 90949 14.97 106963 7 16253 81168 16.68 97421 8 18731 83838 18.26 102569 9 18680 83223 18.33 101903 10 19111 78122 19.65 97233 11 22012 79611 21.66 101623 12 27370 78931 25.75 106301 13 22981 76648 23.07 99629 14 19527 74600 20.75 94127 15 18812 72368 20.63 91180 16 19095 72090 20.94 91185 17 19662 73681 21.06 93343 18 18149 69745 20.65 87894 19 17034 67275 20.20 84309 20 17012 66634 20.34 83646 21 17515 66427 20.87 83942 22 17250 64389 21.13 81639 23 16534 62647 20.88 79181 24 16404 62866 20.69 79270 25 16405 60977 21.20 77382 26 15386 58607 20.79 73993 27 15244 58755 20.60 73999 28 14572 56084 20.62 70656 29 14432 54394 20.97 68826 30 14054 53799 20.71 67853 31 14001 53022 20.89 67023 32 13433 50891 20.88 64324 33 13198 50197 20.82 63395 34 12831 48375 20.96 61206 35 12801 48074 21.03 60875 36 12476 48355 20.51 60831 37 11986 46094 20.64 58080 38 11962 44959 21.02 56921 39 11396 44159 20.51 55555 40 11224 41784 21.17 53008 41 11126 41399 21.18 52525 42 10937 40881 21.11 51818 43 10792 39401 21.50 50193 44 10511 38967 21.24 49478 45 10278 37606 21.46 47884 46 9853 36619 21.20 46472 47 9688 35727 21.33 45415 48 9400 35258 21.05 44658 49 9236 33973 21.38 43209 50 8938 33193 21.21 42131 51 8612 33044 20.67 41656 52 8269 31711 20.68 39980 53 8205 30996 20.93 39201 54 7887 29968 20.83 37855 55 7930 29352 21.27 37282 56 7669 28508 21.20 36177 57 7701 28790 21.10 36491 58 7375 27571 21.10 34946 59 7127 26849 20.98 33976 60 6982 26676 20.74 33658 61 6785 25041 21.32 31826 62 6678 24381 21.50 31059 63 6361 23878 21.04 30239 64 6320 23422 21.25 29742 65 6318 23060 21.51 29378 66 6155 22762 21.29 28917 67 6004 22203 21.29 28207 68 5702 21564 20.91 27266 69 5606 21031 21.05 26637 70 5430 20334 21.08 25764 71 5428 19631 21.66 25059 72 5216 19464 21.13 24680 73 5112 18769 21.41 23881 74 4879 18344 21.01 23223 75 4932 17986 21.52 22918 76 4743 17087 21.73 21830 77 4703 17354 21.32 22057 78 4437 16766 20.93 21203 79 4515 16160 21.84 20675 80 4453 16223 21.54 20676 81 4318 15602 21.68 19920 82 4203 15251 21.60 19454 83 4171 14922 21.85 19093 84 3954 14894 20.98 18848 85 3884 14219 21.46 18103 86 3831 13714 21.84 17545 87 3567 13386 21.04 16953 88 3673 13368 21.55 17041 89 3593 12850 21.85 16443 90 3392 12878 20.85 16270 91 3343 12289 21.39 15632 92 3282 12057 21.40 15339 93 3313 12064 21.55 15377 94 3123 11229 21.76 14352 95 2932 10800 21.35 13732 96 2980 10957 21.38 13937 97 2811 10287 21.46 13098 98 2878 10148 22.09 13026 99 2688 9748 21.61 12436 100 2588 9537 21.34 12125 101 2692 9593 21.91 12285 102 2435 9370 20.63 11805 103 2382 8986 20.95 11368 104 2457 8871 21.69 11328 105 2404 8721 21.61 11125 106 2335 8385 21.78 10720 107 2256 7961 22.08 10217 108 2166 8033 21.24 10199 109 2186 7800 21.89 9986 110 2075 7632 21.38 9707 111 1971 7505 20.80 9476 112 1902 7148 21.02 9050 113 1929 7178 21.18 9107 114 1880 7022 21.12 8902 115 1922 6740 22.19 8662 116 1784 6628 21.21 8412 117 1634 6568 19.92 8202 118 1598 6296 20.24 7894 119 1632 6204 20.83 7836 120 1581 5945 21.01 7526 121 1543 6011 20.43 7554 122 1554 5709 21.40 7263 123 1473 5467 21.22 6940 124 1553 5417 22.28 6970 125 1431 5382 21.00 6813 126 1350 5227 20.53 6577 127 1377 4966 21.71 6343 128 1262 4830 20.72 6092 129 1305 4628 22.00 5933 130 1234 4557 21.31 5791 131 1205 4516 21.06 5721 132 1200 4458 21.21 5658 133 1150 4247 21.31 5397 134 1131 4149 21.42 5280 135 1118 4185 21.08 5303 136 1141 4085 21.83 5226 137 1045 3876 21.24 4921 138 1091 3758 22.50 4849 139 1087 3838 22.07 4925 140 1027 3729 21.59 4756 141 968 3472 21.80 4440 142 994 3445 22.39 4439 143 869 3440 20.17 4309 144 854 3357 20.28 4211 145 880 3251 21.30 4131 146 911 3242 21.94 4153 147 921 3375 21.44 4296 148 819 3131 20.73 3950 149 797 2925 21.41 3722 150 697 2931 19.21 3628 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 56457 377814 13.00 434271 2 26250 134744 16.30 160994 3 24328 162485 13.02 186813 4 21493 151182 12.45 172675 5 12244 196164 5.88 208408 6 10607 228745 4.43 239352 7 8626 152030 5.37 160656 8 8891 143969 5.82 152860 9 8516 145228 5.54 153744 10 10027 137544 6.79 147571 11 14747 133229 9.97 147976 12 8269 135466 5.75 143735 13 8016 136470 5.55 144486 14 6957 130905 5.05 137862 15 7501 126188 5.61 133689 16 8303 124344 6.26 132647 17 6545 125442 4.96 131987 18 6917 129938 5.05 136855 19 6265 116844 5.09 123109 20 6273 117816 5.06 124089 21 6007 113659 5.02 119666 22 5838 113595 4.89 119433 23 5676 110371 4.89 116047 24 5267 106270 4.72 111537 25 5425 106633 4.84 112058 26 5138 103446 4.73 108584 27 5151 101198 4.84 106349 28 4974 101689 4.66 106663 29 4839 97435 4.73 102274 30 4597 96202 4.56 100799 31 4318 92600 4.46 96918 32 4456 90021 4.72 94477 33 4315 90174 4.57 94489 34 4403 87667 4.78 92070 35 4097 85243 4.59 89340 36 3950 83037 4.54 86987 37 4012 83658 4.58 87670 38 3776 79373 4.54 83149 39 3840 80814 4.54 84654 40 3617 75291 4.58 78908 41 3681 75166 4.67 78847 42 3429 73116 4.48 76545 43 3332 71632 4.44 74964 44 3214 67818 4.52 71032 45 3224 67390 4.57 70614 46 3108 66132 4.49 69240 47 3109 62826 4.72 65935 48 3069 62609 4.67 65678 49 2901 61676 4.49 64577 50 2869 59460 4.60 62329 51 2856 58487 4.66 61343 52 2825 56933 4.73 59758 53 2706 55660 4.64 58366 54 2597 53414 4.64 56011 55 2661 53094 4.77 55755 56 2545 51189 4.74 53734 57 2456 50432 4.64 52888 58 2323 48796 4.54 51119 59 2251 47359 4.54 49610 60 2366 46822 4.81 49188 61 2282 46112 4.72 48394 62 2192 44905 4.65 47097 63 2222 43568 4.85 45790 64 2055 41887 4.68 43942 65 2078 41238 4.80 43316 66 1966 40580 4.62 42546 67 1942 40491 4.58 42433 68 1865 38474 4.62 40339 69 1864 37620 4.72 39484 70 1789 37231 4.58 39020 71 1877 35836 4.98 37713 72 1736 35275 4.69 37011 73 1713 34862 4.68 36575 74 1664 33645 4.71 35309 75 1667 32722 4.85 34389 76 1535 32111 4.56 33646 77 1481 30818 4.59 32299 78 1508 30345 4.73 31853 79 1465 29973 4.66 31438 80 1466 28964 4.82 30430 81 1399 28951 4.61 30350 82 1356 27346 4.72 28702 83 1336 27231 4.68 28567 84 1292 25963 4.74 27255 85 1316 25840 4.85 27156 86 1267 24918 4.84 26185 87 1182 24747 4.56 25929 88 1238 24091 4.89 25329 89 1213 23645 4.88 24858 90 1146 23342 4.68 24488 91 1176 22798 4.91 23974 92 1082 22083 4.67 23165 93 1071 21946 4.65 23017 94 1042 21886 4.54 22928 95 991 20347 4.64 21338 96 1014 19510 4.94 20524 97 1001 19248 4.94 20249 98 934 18290 4.86 19224 99 959 18339 4.97 19298 100 951 18166 4.97 19117 101 921 17598 4.97 18519 102 913 18027 4.82 18940 103 811 16682 4.64 17493 104 838 16083 4.95 16921 105 824 15540 5.04 16364 106 821 15178 5.13 15999 107 737 14885 4.72 15622 108 740 14394 4.89 15134 109 710 14405 4.70 15115 110 718 13959 4.89 14677 111 699 13535 4.91 14234 112 651 13491 4.60 14142 113 689 13118 4.99 13807 114 624 12611 4.71 13235 115 610 12311 4.72 12921 116 623 12151 4.88 12774 117 581 11818 4.69 12399 118 574 11568 4.73 12142 119 539 11283 4.56 11822 120 569 10886 4.97 11455 121 520 10574 4.69 11094 122 544 10384 4.98 10928 123 517 10474 4.70 10991 124 476 9942 4.57 10418 125 509 9849 4.91 10358 126 489 9576 4.86 10065 127 473 9513 4.74 9986 128 469 9061 4.92 9530 129 477 9181 4.94 9658 130 450 8656 4.94 9106 131 439 8489 4.92 8928 132 432 8387 4.90 8819 133 433 8352 4.93 8785 134 396 7786 4.84 8182 135 356 7752 4.39 8108 136 395 7659 4.90 8054 137 423 7278 5.49 7701 138 393 7198 5.18 7591 139 322 6893 4.46 7215 140 348 6808 4.86 7156 141 349 6747 4.92 7096 142 379 6516 5.50 6895 143 297 6179 4.59 6476 144 303 6250 4.62 6553 145 306 6168 4.73 6474 146 302 6089 4.73 6391 147 305 5918 4.90 6223 148 291 5782 4.79 6073 149 297 5634 5.01 5931 150 301 5506 5.18 5807 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 119846 369427 24.49 489273 2 105078 482900 17.87 587978 3 86968 424823 16.99 511791 4 78499 395170 16.57 473669 5 49115 464407 9.56 513522 6 45705 497854 8.41 543559 7 42094 557826 7.02 599920 8 46945 538123 8.02 585068 9 36444 506147 6.72 542591 10 34744 485093 6.68 519837 11 36852 456507 7.47 493359 12 34763 446339 7.23 481102 13 31896 451129 6.60 483025 14 30743 441847 6.51 472590 15 32324 432358 6.96 464682 16 35843 411433 8.01 447276 17 28216 407464 6.48 435680 18 27178 397983 6.39 425161 19 27531 395894 6.50 423425 20 26687 388272 6.43 414959 21 25613 369320 6.49 394933 22 24395 364935 6.27 389330 23 24369 359962 6.34 384331 24 22911 351387 6.12 374298 25 22605 347315 6.11 369920 26 21456 340518 5.93 361974 27 20980 333254 5.92 354234 28 20370 332537 5.77 352907 29 20310 324753 5.89 345063 30 19035 317968 5.65 337003 31 19198 312124 5.79 331322 32 18536 301925 5.78 320461 33 17967 297180 5.70 315147 34 17575 288553 5.74 306128 35 17046 281412 5.71 298458 36 16408 275717 5.62 292125 37 16697 269996 5.82 286693 38 15974 265205 5.68 281179 39 15666 258881 5.71 274547 40 15138 252363 5.66 267501 41 15389 252043 5.75 267432 42 14302 240659 5.61 254961 43 14721 236564 5.86 251285 44 14028 232619 5.69 246647 45 13700 227532 5.68 241232 46 13330 221500 5.68 234830 47 13539 216793 5.88 230332 48 12637 210481 5.66 223118 49 12530 206422 5.72 218952 50 12402 202542 5.77 214944 51 12445 197944 5.92 210389 52 11783 191205 5.80 202988 53 11644 188479 5.82 200123 54 11041 182324 5.71 193365 55 11100 177744 5.88 188844 56 11188 174976 6.01 186164 57 10534 169905 5.84 180439 58 10566 168879 5.89 179445 59 10556 166176 5.97 176732 60 9926 158737 5.89 168663 61 9745 154707 5.93 164452 62 9529 153980 5.83 163509 63 9398 146137 6.04 155535 64 8978 142931 5.91 151909 65 9161 139702 6.15 148863 66 8573 137623 5.86 146196 67 8774 136816 6.03 145590 68 8430 132167 6.00 140597 69 8208 131074 5.89 139282 70 8134 126024 6.06 134158 71 8271 122974 6.30 131245 72 7600 120712 5.92 128312 73 7514 118143 5.98 125657 74 7540 117414 6.03 124954 75 7222 112837 6.02 120059 76 7247 108619 6.25 115866 77 7118 107993 6.18 115111 78 6905 107159 6.05 114064 79 6732 104426 6.06 111158 80 6549 100649 6.11 107198 81 6361 99039 6.04 105400 82 6331 97551 6.09 103882 83 6306 93488 6.32 99794 84 5811 90936 6.01 96747 85 5899 89043 6.21 94942 86 5671 87399 6.09 93070 87 5709 84976 6.30 90685 88 5473 84019 6.12 89492 89 5550 82378 6.31 87928 90 5153 78611 6.15 83764 91 5283 77686 6.37 82969 92 5078 75286 6.32 80364 93 4829 73422 6.17 78251 94 4864 72329 6.30 77193 95 4682 71327 6.16 76009 96 4547 70991 6.02 75538 97 4599 69198 6.23 73797 98 4501 65979 6.39 70480 99 4298 64500 6.25 68798 100 4171 63070 6.20 67241 101 4302 61584 6.53 65886 102 3922 60561 6.08 64483 103 3987 60311 6.20 64298 104 3849 58217 6.20 62066 105 3823 57465 6.24 61288 106 3598 54729 6.17 58327 107 3617 53766 6.30 57383 108 3386 53094 6.00 56480 109 3461 51039 6.35 54500 110 3320 50358 6.19 53678 111 3354 49867 6.30 53221 112 3223 47557 6.35 50780 113 3152 46566 6.34 49718 114 2933 45646 6.04 48579 115 2996 44352 6.33 47348 116 2988 42934 6.51 45922 117 2702 42373 5.99 45075 118 2721 40774 6.26 43495 119 2767 40034 6.46 42801 120 2563 39019 6.16 41582 121 2536 37905 6.27 40441 122 2476 36778 6.31 39254 123 2336 36108 6.08 38444 124 2399 35055 6.41 37454 125 2348 34407 6.39 36755 126 2330 33841 6.44 36171 127 2209 32968 6.28 35177 128 2095 32237 6.10 34332 129 2182 31470 6.48 33652 130 2147 30757 6.53 32904 131 2128 30309 6.56 32437 132 1953 29454 6.22 31407 133 1946 28319 6.43 30265 134 1820 27972 6.11 29792 135 1760 26928 6.13 28688 136 1798 26472 6.36 28270 137 1796 26352 6.38 28148 138 1600 25627 5.88 27227 139 1756 25031 6.56 26787 140 1693 24219 6.53 25912 141 1489 23457 5.97 24946 142 1572 23348 6.31 24920 143 1592 22540 6.60 24132 144 1503 22194 6.34 23697 145 1408 21598 6.12 23006 146 1400 21127 6.21 22527 147 1389 20865 6.24 22254 148 1401 20726 6.33 22127 149 1419 20304 6.53 21723 150 1238 19767 5.89 21005