EF03-EM03-Zygote_R1_001.fastp-trim.20220827_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 15454967 lines in total Total number of methylation call strings processed: 30909934 Final Cytosine Methylation Report ================================= Total number of C's analysed: 215423755 Total methylated C's in CpG context: 5591924 Total methylated C's in CHG context: 1803011 Total methylated C's in CHH context: 9475151 Total C to T conversions in CpG context: 20802097 Total C to T conversions in CHG context: 38493782 Total C to T conversions in CHH context: 139257790 C methylated in CpG context: 21.2% C methylated in CHG context: 4.5% C methylated in CHH context: 6.4%