CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 79981 161028 33.19 241009 2 85457 244943 25.86 330400 3 58992 298153 16.52 357145 4 47249 273210 14.74 320459 5 63907 283226 18.41 347133 6 42249 205244 17.07 247493 7 45037 194147 18.83 239184 8 55462 215467 20.47 270929 9 57969 211001 21.55 268970 10 53796 203886 20.88 257682 11 63075 204359 23.59 267434 12 73521 204824 26.41 278345 13 60022 209058 22.31 269080 14 55305 206176 21.15 261481 15 55988 204207 21.52 260195 16 54949 203666 21.25 258615 17 56365 206995 21.40 263360 18 54724 208630 20.78 263354 19 56244 206229 21.43 262473 20 58826 215109 21.47 273935 21 61435 218182 21.97 279617 22 60991 211940 22.35 272931 23 59338 216479 21.51 275817 24 58904 215379 21.48 274283 25 58777 212198 21.69 270975 26 58431 208262 21.91 266693 27 57670 209051 21.62 266721 28 57598 208286 21.66 265884 29 57368 210529 21.41 267897 30 57484 211023 21.41 268507 31 57709 212436 21.36 270145 32 57985 211564 21.51 269549 33 57947 211576 21.50 269523 34 58014 208436 21.77 266450 35 57731 208249 21.71 265980 36 56959 209434 21.38 266393 37 57398 207481 21.67 264879 38 56842 207330 21.52 264172 39 56209 207244 21.34 263453 40 56171 204448 21.55 260619 41 56188 202915 21.69 259103 42 55605 203275 21.48 258880 43 55282 202918 21.41 258200 44 56432 202732 21.77 259164 45 54888 201553 21.40 256441 46 54832 201004 21.43 255836 47 54303 198447 21.48 252750 48 53586 197528 21.34 251114 49 53697 195223 21.57 248920 50 53450 194167 21.59 247617 51 52190 192805 21.30 244995 52 51097 189962 21.20 241059 53 51443 188344 21.45 239787 54 50754 187255 21.32 238009 55 50266 184671 21.40 234937 56 49797 183374 21.36 233171 57 49526 182436 21.35 231962 58 49421 181522 21.40 230943 59 48627 177113 21.54 225740 60 47551 176507 21.22 224058 61 46880 172523 21.37 219403 62 46619 170810 21.44 217429 63 45677 169760 21.20 215437 64 45535 167271 21.40 212806 65 44503 164542 21.29 209045 66 44419 163826 21.33 208245 67 43890 161798 21.34 205688 68 42955 159311 21.24 202266 69 41941 155644 21.23 197585 70 41180 154140 21.08 195320 71 40888 151166 21.29 192054 72 40008 149014 21.17 189022 73 39751 146290 21.37 186041 74 39033 142962 21.45 181995 75 38045 141364 21.21 179409 76 37301 138593 21.21 175894 77 36461 135796 21.17 172257 78 35726 132872 21.19 168598 79 35115 130598 21.19 165713 80 34180 128870 20.96 163050 81 34183 125728 21.38 159911 82 33179 123627 21.16 156806 83 32496 121298 21.13 153794 84 31744 119239 21.02 150983 85 31370 116698 21.19 148068 86 30552 114426 21.07 144978 87 29977 112183 21.09 142160 88 29101 110191 20.89 139292 89 28713 108802 20.88 137515 90 28452 106690 21.05 135142 91 27459 103541 20.96 131000 92 26850 101054 20.99 127904 93 26553 98755 21.19 125308 94 25333 95972 20.88 121305 95 24844 94796 20.77 119640 96 24463 92394 20.93 116857 97 23912 90961 20.82 114873 98 23211 88265 20.82 111476 99 22914 86315 20.98 109229 100 22307 84733 20.84 107040 101 21734 82178 20.92 103912 102 21196 80296 20.88 101492 103 20580 78928 20.68 99508 104 19748 77251 20.36 96999 105 19924 75605 20.86 95529 106 19277 73169 20.85 92446 107 18802 70981 20.94 89783 108 18224 69597 20.75 87821 109 17801 68222 20.69 86023 110 17586 66763 20.85 84349 111 17188 64678 21.00 81866 112 16569 63331 20.74 79900 113 16283 61696 20.88 77979 114 15737 60599 20.62 76336 115 15316 58835 20.66 74151 116 14837 57170 20.60 72007 117 14653 56100 20.71 70753 118 14051 54801 20.41 68852 119 13695 53721 20.31 67416 120 13514 52471 20.48 65985 121 13246 50838 20.67 64084 122 12582 50079 20.08 62661 123 12534 48443 20.56 60977 124 12300 47413 20.60 59713 125 12233 46205 20.93 58438 126 11520 44668 20.50 56188 127 11238 43750 20.44 54988 128 10801 42635 20.21 53436 129 10556 41360 20.33 51916 130 10351 40517 20.35 50868 131 9976 39380 20.21 49356 132 9678 37948 20.32 47626 133 9390 37060 20.22 46450 134 9207 36476 20.15 45683 135 8818 35297 19.99 44115 136 8726 34350 20.26 43076 137 8460 33578 20.12 42038 138 8403 32723 20.43 41126 139 8120 32254 20.11 40374 140 7894 31285 20.15 39179 141 7515 30197 19.93 37712 142 7091 29592 19.33 36683 143 6991 28802 19.53 35793 144 6995 28375 19.78 35370 145 6664 27249 19.65 33913 146 6691 27240 19.72 33931 147 6338 26614 19.23 32952 148 6318 26062 19.51 32380 149 5948 24990 19.23 30938 150 5771 24103 19.32 29874 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 132163 740383 15.15 872546 2 90485 276270 24.67 366755 3 84146 390261 17.74 474407 4 42381 336130 11.20 378511 5 24535 459975 5.06 484510 6 19160 500534 3.69 519694 7 16117 381530 4.05 397647 8 17284 395558 4.19 412842 9 16891 389299 4.16 406190 10 21828 373068 5.53 394896 11 33372 367170 8.33 400542 12 15548 382659 3.90 398207 13 13759 386810 3.43 400569 14 13748 381718 3.48 395466 15 14089 376964 3.60 391053 16 15314 373044 3.94 388358 17 13274 386657 3.32 399931 18 14406 391538 3.55 405944 19 14284 387256 3.56 401540 20 14376 390594 3.55 404970 21 13640 393038 3.35 406678 22 13882 399486 3.36 413368 23 13737 394976 3.36 408713 24 13265 385892 3.32 399157 25 13244 390857 3.28 404101 26 12818 382031 3.25 394849 27 12981 384665 3.26 397646 28 12990 390499 3.22 403489 29 12410 393850 3.05 406260 30 12594 392749 3.11 405343 31 12631 393882 3.11 406513 32 12322 389639 3.07 401961 33 12492 395651 3.06 408143 34 12126 388601 3.03 400727 35 11984 384694 3.02 396678 36 11941 385382 3.01 397323 37 11690 392843 2.89 404533 38 11718 385557 2.95 397275 39 11838 386662 2.97 398500 40 11806 382218 3.00 394024 41 11674 382920 2.96 394594 42 11494 381728 2.92 393222 43 11891 383760 3.01 395651 44 11705 376371 3.02 388076 45 11948 380647 3.04 392595 46 12059 375548 3.11 387607 47 12048 371573 3.14 383621 48 11886 368225 3.13 380111 49 12295 371176 3.21 383471 50 12157 365091 3.22 377248 51 11887 361118 3.19 373005 52 11965 357647 3.24 369612 53 12022 356842 3.26 368864 54 11743 350586 3.24 362329 55 11983 351182 3.30 363165 56 12169 343839 3.42 356008 57 12119 345109 3.39 357228 58 12020 337592 3.44 349612 59 12064 333610 3.49 345674 60 12238 329335 3.58 341573 61 11642 329041 3.42 340683 62 11809 320546 3.55 332355 63 11772 318627 3.56 330399 64 11636 314972 3.56 326608 65 11748 311330 3.64 323078 66 11701 306828 3.67 318529 67 11856 304800 3.74 316656 68 11388 297394 3.69 308782 69 11431 294004 3.74 305435 70 11150 288912 3.72 300062 71 11234 283913 3.81 295147 72 11012 276924 3.82 287936 73 11024 277185 3.83 288209 74 10804 268851 3.86 279655 75 10626 264865 3.86 275491 76 10663 259234 3.95 269897 77 10377 254706 3.91 265083 78 10441 250661 4.00 261102 79 9958 246582 3.88 256540 80 10131 239313 4.06 249444 81 9753 236123 3.97 245876 82 9839 229484 4.11 239323 83 9602 225998 4.08 235600 84 9509 220595 4.13 230104 85 9404 217949 4.14 227353 86 9150 211814 4.14 220964 87 9263 209469 4.23 218732 88 8918 203762 4.19 212680 89 8676 200413 4.15 209089 90 8609 196337 4.20 204946 91 8487 192376 4.23 200863 92 8421 186808 4.31 195229 93 8275 183513 4.31 191788 94 8252 181105 4.36 189357 95 7987 173315 4.41 181302 96 7789 169504 4.39 177293 97 7771 166370 4.46 174141 98 7466 160849 4.44 168315 99 7299 158813 4.39 166112 100 7202 154692 4.45 161894 101 7038 151992 4.43 159030 102 6795 148575 4.37 155370 103 6861 143197 4.57 150058 104 6703 139306 4.59 146009 105 6504 136418 4.55 142922 106 6261 132650 4.51 138911 107 6144 129437 4.53 135581 108 6075 126694 4.58 132769 109 5873 123921 4.52 129794 110 5668 119931 4.51 125599 111 5804 118522 4.67 124326 112 5593 114993 4.64 120586 113 5456 112046 4.64 117502 114 5269 108749 4.62 114018 115 5132 106174 4.61 111306 116 5022 103458 4.63 108480 117 4982 101160 4.69 106142 118 4872 98554 4.71 103426 119 4649 95558 4.64 100207 120 4639 93731 4.72 98370 121 4624 91128 4.83 95752 122 4403 88119 4.76 92522 123 4323 86549 4.76 90872 124 4041 84025 4.59 88066 125 4008 82004 4.66 86012 126 3895 80104 4.64 83999 127 3981 78574 4.82 82555 128 3825 76511 4.76 80336 129 3725 74313 4.77 78038 130 3622 72166 4.78 75788 131 3474 69964 4.73 73438 132 3423 67999 4.79 71422 133 3411 66759 4.86 70170 134 3285 64608 4.84 67893 135 3230 63273 4.86 66503 136 2920 61821 4.51 64741 137 2979 60112 4.72 63091 138 2928 57958 4.81 60886 139 2874 56730 4.82 59604 140 2747 55011 4.76 57758 141 2529 53605 4.51 56134 142 2546 51954 4.67 54500 143 2442 50155 4.64 52597 144 2351 48843 4.59 51194 145 2304 48135 4.57 50439 146 2213 46701 4.52 48914 147 2141 46185 4.43 48326 148 2125 44439 4.56 46564 149 2106 43735 4.59 45841 150 2174 42787 4.84 44961 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 377060 829473 31.25 1206533 2 329596 1081244 23.36 1410840 3 263336 1021508 20.50 1284844 4 201372 1046745 16.13 1248117 5 155104 1259593 10.96 1414697 6 138295 1389590 9.05 1527885 7 130724 1587679 7.61 1718403 8 135138 1622983 7.69 1758121 9 117428 1500875 7.26 1618303 10 106397 1454995 6.81 1561392 11 127429 1417531 8.25 1544960 12 113834 1436529 7.34 1550363 13 112067 1447872 7.18 1559939 14 106660 1458752 6.81 1565412 15 121137 1461926 7.65 1583063 16 117928 1437087 7.58 1555015 17 112317 1429280 7.29 1541597 18 105926 1431394 6.89 1537320 19 116441 1429053 7.53 1545494 20 109790 1449198 7.04 1558988 21 114185 1432449 7.38 1546634 22 107552 1442886 6.94 1550438 23 113611 1444845 7.29 1558456 24 103274 1438573 6.70 1541847 25 110783 1446179 7.12 1556962 26 103895 1452049 6.68 1555944 27 109273 1456137 6.98 1565410 28 100788 1473979 6.40 1574767 29 106379 1469689 6.75 1576068 30 99231 1469829 6.32 1569060 31 104053 1459518 6.65 1563571 32 96010 1449309 6.21 1545319 33 98539 1444490 6.39 1543029 34 92197 1442701 6.01 1534898 35 96536 1435144 6.30 1531680 36 87712 1435200 5.76 1522912 37 90918 1435543 5.96 1526461 38 85140 1431619 5.61 1516759 39 88364 1415823 5.87 1504187 40 81611 1412435 5.46 1494046 41 85141 1417937 5.66 1503078 42 78908 1411899 5.29 1490807 43 83057 1403184 5.59 1486241 44 77953 1401733 5.27 1479686 45 80111 1389723 5.45 1469834 46 75817 1382490 5.20 1458307 47 78555 1373943 5.41 1452498 48 74419 1364295 5.17 1438714 49 75924 1357893 5.30 1433817 50 71878 1351094 5.05 1422972 51 75014 1338188 5.31 1413202 52 69810 1326625 5.00 1396435 53 71945 1313994 5.19 1385939 54 68653 1305323 5.00 1373976 55 70313 1287077 5.18 1357390 56 67360 1278411 5.01 1345771 57 66332 1258947 5.01 1325279 58 64490 1252452 4.90 1316942 59 65969 1237661 5.06 1303630 60 61225 1211739 4.81 1272964 61 62048 1193972 4.94 1256020 62 59894 1185489 4.81 1245383 63 59822 1159092 4.91 1218914 64 57310 1145220 4.77 1202530 65 57091 1128319 4.82 1185410 66 54919 1112926 4.70 1167845 67 55091 1102539 4.76 1157630 68 53174 1080872 4.69 1134046 69 52720 1069785 4.70 1122505 70 50881 1051561 4.62 1102442 71 51168 1032401 4.72 1083569 72 49142 1015147 4.62 1064289 73 48485 1001857 4.62 1050342 74 47433 989936 4.57 1037369 75 47278 965463 4.67 1012741 76 45014 947663 4.53 992677 77 44798 932883 4.58 977681 78 43771 923256 4.53 967027 79 43489 901020 4.60 944509 80 42214 878357 4.59 920571 81 41179 862972 4.55 904151 82 40330 848097 4.54 888427 83 40343 827654 4.65 867997 84 38270 811493 4.50 849763 85 37904 792531 4.56 830435 86 36574 778163 4.49 814737 87 36339 761872 4.55 798211 88 35660 748067 4.55 783727 89 35093 731882 4.58 766975 90 34190 711308 4.59 745498 91 33837 696623 4.63 730460 92 32323 680838 4.53 713161 93 32402 666262 4.64 698664 94 31097 651958 4.55 683055 95 31121 640830 4.63 671951 96 30588 627912 4.65 658500 97 29353 612938 4.57 642291 98 28911 595553 4.63 624464 99 28562 580134 4.69 608696 100 27710 567801 4.65 595511 101 26878 556324 4.61 583202 102 26443 546211 4.62 572654 103 26062 531968 4.67 558030 104 25220 517479 4.65 542699 105 24425 507059 4.60 531484 106 23959 491373 4.65 515332 107 23528 478793 4.68 502321 108 22835 468101 4.65 490936 109 22594 454710 4.73 477304 110 21831 444819 4.68 466650 111 21473 437662 4.68 459135 112 21021 423249 4.73 444270 113 20313 412990 4.69 433303 114 20087 403324 4.74 423411 115 19638 392749 4.76 412387 116 19079 382904 4.75 401983 117 18581 372655 4.75 391236 118 17879 362927 4.70 380806 119 17786 354913 4.77 372699 120 17298 346179 4.76 363477 121 16954 337585 4.78 354539 122 16587 329485 4.79 346072 123 16019 319051 4.78 335070 124 15783 311284 4.83 327067 125 15084 301449 4.77 316533 126 14561 294762 4.71 309323 127 14502 286795 4.81 301297 128 14053 279654 4.78 293707 129 13659 272334 4.78 285993 130 13503 265262 4.84 278765 131 13156 258787 4.84 271943 132 12595 250807 4.78 263402 133 12314 245930 4.77 258244 134 12226 238354 4.88 250580 135 11553 233070 4.72 244623 136 11169 226451 4.70 237620 137 11058 220883 4.77 231941 138 10688 214875 4.74 225563 139 10601 209017 4.83 219618 140 10073 201744 4.76 211817 141 9735 196908 4.71 206643 142 9506 191405 4.73 200911 143 9256 186899 4.72 196155 144 8832 181821 4.63 190653 145 8813 178131 4.71 186944 146 8328 174204 4.56 182532 147 8152 170623 4.56 178775 148 8068 166280 4.63 174348 149 8173 161609 4.81 169782 150 7853 156834 4.77 164687 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 6942 18183 27.63 25125 2 7598 26806 22.08 34404 3 5387 33667 13.79 39054 4 4341 28717 13.13 33058 5 5089 30410 14.34 35499 6 3575 20060 15.13 23635 7 3543 18833 15.83 22376 8 4251 19123 18.19 23374 9 4112 18551 18.14 22663 10 4106 17722 18.81 21828 11 4945 17107 22.42 22052 12 6686 16884 28.37 23570 13 4999 16483 23.27 21482 14 3837 15694 19.65 19531 15 3766 15306 19.75 19072 16 3711 14901 19.94 18612 17 3817 15449 19.81 19266 18 3482 14379 19.49 17861 19 3391 13675 19.87 17066 20 3249 13840 19.01 17089 21 3353 13788 19.56 17141 22 3274 13066 20.04 16340 23 3201 13013 19.74 16214 24 3057 12396 19.78 15453 25 3080 12067 20.33 15147 26 2876 11730 19.69 14606 27 2807 11227 20.00 14034 28 2674 10965 19.61 13639 29 2611 10893 19.34 13504 30 2594 10353 20.04 12947 31 2715 10307 20.85 13022 32 2398 9833 19.61 12231 33 2376 9587 19.86 11963 34 2326 9016 20.51 11342 35 2252 8952 20.10 11204 36 2174 8721 19.95 10895 37 2190 8635 20.23 10825 38 2018 8330 19.50 10348 39 2131 7991 21.05 10122 40 1913 7766 19.76 9679 41 1923 7328 20.79 9251 42 1935 7221 21.13 9156 43 1766 7212 19.67 8978 44 1863 6950 21.14 8813 45 1660 6701 19.85 8361 46 1698 6448 20.84 8146 47 1549 6471 19.31 8020 48 1476 5875 20.08 7351 49 1454 5889 19.80 7343 50 1455 5821 20.00 7276 51 1428 5709 20.01 7137 52 1316 5454 19.44 6770 53 1364 5335 20.36 6699 54 1269 5149 19.77 6418 55 1282 4953 20.56 6235 56 1189 4649 20.37 5838 57 1140 4741 19.38 5881 58 1205 4663 20.54 5868 59 1071 4464 19.35 5535 60 1117 4379 20.32 5496 61 1006 4134 19.57 5140 62 967 4101 19.08 5068 63 956 3844 19.92 4800 64 938 3806 19.77 4744 65 935 3685 20.24 4620 66 902 3757 19.36 4659 67 938 3641 20.48 4579 68 858 3563 19.41 4421 69 805 3381 19.23 4186 70 772 3241 19.24 4013 71 755 3202 19.08 3957 72 792 3165 20.02 3957 73 769 2993 20.44 3762 74 659 2956 18.23 3615 75 675 2823 19.30 3498 76 669 2726 19.71 3395 77 651 2719 19.32 3370 78 593 2496 19.20 3089 79 645 2428 20.99 3073 80 627 2392 20.77 3019 81 587 2360 19.92 2947 82 600 2261 20.97 2861 83 556 2193 20.23 2749 84 518 2212 18.97 2730 85 557 2178 20.37 2735 86 511 2072 19.78 2583 87 501 1972 20.26 2473 88 475 2014 19.08 2489 89 503 1955 20.46 2458 90 498 1905 20.72 2403 91 414 1768 18.97 2182 92 412 1839 18.30 2251 93 398 1710 18.88 2108 94 408 1574 20.59 1982 95 376 1659 18.48 2035 96 360 1655 17.87 2015 97 353 1508 18.97 1861 98 345 1461 19.10 1806 99 348 1348 20.52 1696 100 358 1395 20.42 1753 101 353 1456 19.51 1809 102 321 1387 18.79 1708 103 306 1226 19.97 1532 104 291 1255 18.82 1546 105 306 1246 19.72 1552 106 313 1258 19.92 1571 107 292 1120 20.68 1412 108 273 1151 19.17 1424 109 287 1149 19.99 1436 110 260 1056 19.76 1316 111 249 1062 18.99 1311 112 224 1024 17.95 1248 113 217 1010 17.69 1227 114 226 956 19.12 1182 115 238 963 19.82 1201 116 208 908 18.64 1116 117 196 939 17.27 1135 118 239 870 21.55 1109 119 196 848 18.77 1044 120 189 811 18.90 1000 121 196 830 19.10 1026 122 188 796 19.11 984 123 170 761 18.26 931 124 178 741 19.37 919 125 196 746 20.81 942 126 158 750 17.40 908 127 142 693 17.01 835 128 138 616 18.30 754 129 131 640 16.99 771 130 138 633 17.90 771 131 142 639 18.18 781 132 127 580 17.96 707 133 125 610 17.01 735 134 136 577 19.07 713 135 128 555 18.74 683 136 132 545 19.50 677 137 128 538 19.22 666 138 128 508 20.13 636 139 123 514 19.31 637 140 137 489 21.88 626 141 107 485 18.07 592 142 103 434 19.18 537 143 106 451 19.03 557 144 94 387 19.54 481 145 96 426 18.39 522 146 98 390 20.08 488 147 105 463 18.49 568 148 114 370 23.55 484 149 84 417 16.77 501 150 91 359 20.22 450 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 12385 92138 11.85 104523 2 7578 30398 19.95 37976 3 7262 37890 16.08 45152 4 4245 32910 11.43 37155 5 2336 46624 4.77 48960 6 1838 50998 3.48 52836 7 1474 34252 4.13 35726 8 1632 33967 4.58 35599 9 1296 32127 3.88 33423 10 1943 30312 6.02 32255 11 3897 29104 11.81 33001 12 1305 28831 4.33 30136 13 1218 28492 4.10 29710 14 955 27648 3.34 28603 15 1061 26673 3.83 27734 16 1380 24878 5.26 26258 17 923 25762 3.46 26685 18 960 26457 3.50 27417 19 818 23856 3.32 24674 20 862 23650 3.52 24512 21 782 22808 3.31 23590 22 766 22977 3.23 23743 23 722 21997 3.18 22719 24 660 21352 3.00 22012 25 630 20901 2.93 21531 26 577 20324 2.76 20901 27 649 19995 3.14 20644 28 630 19479 3.13 20109 29 611 19104 3.10 19715 30 533 18739 2.77 19272 31 542 17642 2.98 18184 32 534 17047 3.04 17581 33 448 16961 2.57 17409 34 491 16471 2.89 16962 35 458 15974 2.79 16432 36 469 15377 2.96 15846 37 476 15138 3.05 15614 38 407 14708 2.69 15115 39 429 14505 2.87 14934 40 364 13700 2.59 14064 41 384 13297 2.81 13681 42 382 13159 2.82 13541 43 355 12666 2.73 13021 44 330 12052 2.67 12382 45 330 12111 2.65 12441 46 355 11884 2.90 12239 47 330 11076 2.89 11406 48 309 11012 2.73 11321 49 300 10653 2.74 10953 50 294 10540 2.71 10834 51 274 10160 2.63 10434 52 298 9582 3.02 9880 53 289 9310 3.01 9599 54 280 9054 3.00 9334 55 270 8907 2.94 9177 56 276 8492 3.15 8768 57 267 8438 3.07 8705 58 259 8131 3.09 8390 59 228 8162 2.72 8390 60 233 7677 2.95 7910 61 232 7554 2.98 7786 62 221 7066 3.03 7287 63 204 7061 2.81 7265 64 196 6850 2.78 7046 65 220 6625 3.21 6845 66 199 6526 2.96 6725 67 199 6501 2.97 6700 68 190 6124 3.01 6314 69 178 6237 2.77 6415 70 207 5741 3.48 5948 71 186 5776 3.12 5962 72 162 5455 2.88 5617 73 160 5435 2.86 5595 74 156 5147 2.94 5303 75 171 4942 3.34 5113 76 176 4761 3.56 4937 77 147 4730 3.01 4877 78 139 4498 3.00 4637 79 125 4430 2.74 4555 80 137 4397 3.02 4534 81 117 4209 2.70 4326 82 132 4057 3.15 4189 83 102 3828 2.60 3930 84 111 3718 2.90 3829 85 145 3724 3.75 3869 86 110 3657 2.92 3767 87 133 3581 3.58 3714 88 97 3475 2.72 3572 89 100 3425 2.84 3525 90 121 3427 3.41 3548 91 99 3225 2.98 3324 92 111 3003 3.56 3114 93 96 3080 3.02 3176 94 88 3070 2.79 3158 95 86 2664 3.13 2750 96 81 2674 2.94 2755 97 88 2659 3.20 2747 98 77 2417 3.09 2494 99 79 2376 3.22 2455 100 78 2400 3.15 2478 101 81 2327 3.36 2408 102 65 2366 2.67 2431 103 62 2151 2.80 2213 104 61 2097 2.83 2158 105 83 2108 3.79 2191 106 54 2032 2.59 2086 107 68 1962 3.35 2030 108 64 1832 3.38 1896 109 63 1808 3.37 1871 110 65 1827 3.44 1892 111 70 1745 3.86 1815 112 61 1699 3.47 1760 113 50 1680 2.89 1730 114 46 1661 2.69 1707 115 54 1519 3.43 1573 116 46 1540 2.90 1586 117 43 1491 2.80 1534 118 50 1439 3.36 1489 119 43 1386 3.01 1429 120 54 1368 3.80 1422 121 35 1336 2.55 1371 122 43 1287 3.23 1330 123 50 1205 3.98 1255 124 38 1170 3.15 1208 125 35 1224 2.78 1259 126 40 1118 3.45 1158 127 38 1103 3.33 1141 128 32 1089 2.85 1121 129 38 982 3.73 1020 130 34 1027 3.20 1061 131 41 958 4.10 999 132 39 954 3.93 993 133 30 933 3.12 963 134 34 908 3.61 942 135 32 910 3.40 942 136 26 816 3.09 842 137 28 882 3.08 910 138 24 798 2.92 822 139 26 776 3.24 802 140 17 761 2.19 778 141 20 750 2.60 770 142 21 686 2.97 707 143 9 695 1.28 704 144 18 690 2.54 708 145 28 680 3.95 708 146 26 633 3.95 659 147 21 645 3.15 666 148 17 622 2.66 639 149 23 653 3.40 676 150 20 600 3.23 620 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 30648 88104 25.81 118752 2 27226 118674 18.66 145900 3 21411 104392 17.02 125803 4 16837 97891 14.68 114728 5 12532 118308 9.58 130840 6 11589 128834 8.25 140423 7 9321 146653 5.98 155974 8 11116 141268 7.29 152384 9 7378 130219 5.36 137597 10 6614 123723 5.07 130337 11 8243 114577 6.71 122820 12 7365 112864 6.13 120229 13 6574 111915 5.55 118489 14 5882 109703 5.09 115585 15 7017 108537 6.07 115554 16 8053 101017 7.38 109070 17 5847 100354 5.51 106201 18 5602 96610 5.48 102212 19 5697 95439 5.63 101136 20 5542 93433 5.60 98975 21 5428 88290 5.79 93718 22 4880 88103 5.25 92983 23 5323 86323 5.81 91646 24 4439 83371 5.06 87810 25 4985 82465 5.70 87450 26 4335 80418 5.11 84753 27 4668 79165 5.57 83833 28 4171 78651 5.04 82822 29 4392 75380 5.51 79772 30 3978 73358 5.14 77336 31 4281 71698 5.63 75979 32 3814 69054 5.23 72868 33 3952 67639 5.52 71591 34 3495 65443 5.07 68938 35 3977 63555 5.89 67532 36 3436 62372 5.22 65808 37 3645 61054 5.63 64699 38 3364 59417 5.36 62781 39 3636 56812 6.02 60448 40 3234 56081 5.45 59315 41 3405 54738 5.86 58143 42 3047 53201 5.42 56248 43 3331 51716 6.05 55047 44 2996 50127 5.64 53123 45 3102 48622 6.00 51724 46 2845 47331 5.67 50176 47 3013 46479 6.09 49492 48 2739 44572 5.79 47311 49 2755 43297 5.98 46052 50 2600 42476 5.77 45076 51 2703 40479 6.26 43182 52 2449 39634 5.82 42083 53 2598 38565 6.31 41163 54 2462 37468 6.17 39930 55 2560 36425 6.57 38985 56 2373 35782 6.22 38155 57 2290 34324 6.25 36614 58 2171 34239 5.96 36410 59 2384 33145 6.71 35529 60 2053 31570 6.11 33623 61 2043 30674 6.24 32717 62 1950 30344 6.04 32294 63 2003 28816 6.50 30819 64 1761 27953 5.93 29714 65 1837 27181 6.33 29018 66 1694 26329 6.05 28023 67 1739 26003 6.27 27742 68 1652 25155 6.16 26807 69 1686 24590 6.42 26276 70 1591 23965 6.23 25556 71 1593 23113 6.45 24706 72 1481 22568 6.16 24049 73 1521 22143 6.43 23664 74 1434 21808 6.17 23242 75 1400 20627 6.36 22027 76 1306 19895 6.16 21201 77 1354 19656 6.44 21010 78 1264 19679 6.04 20943 79 1218 18892 6.06 20110 80 1128 18006 5.90 19134 81 1136 17704 6.03 18840 82 1114 17395 6.02 18509 83 1111 16638 6.26 17749 84 982 15619 5.92 16601 85 980 15535 5.93 16515 86 985 15017 6.16 16002 87 974 14470 6.31 15444 88 944 14496 6.11 15440 89 947 14122 6.28 15069 90 821 13372 5.78 14193 91 868 13097 6.22 13965 92 810 12597 6.04 13407 93 803 12358 6.10 13161 94 792 12114 6.14 12906 95 745 11873 5.90 12618 96 760 11645 6.13 12405 97 707 11357 5.86 12064 98 679 10766 5.93 11445 99 676 10504 6.05 11180 100 648 10217 5.96 10865 101 670 9729 6.44 10399 102 652 9703 6.30 10355 103 638 9303 6.42 9941 104 579 9040 6.02 9619 105 604 9067 6.25 9671 106 542 8674 5.88 9216 107 587 8560 6.42 9147 108 564 8184 6.45 8748 109 503 7780 6.07 8283 110 499 7611 6.15 8110 111 524 7579 6.47 8103 112 488 7170 6.37 7658 113 448 7099 5.94 7547 114 492 6809 6.74 7301 115 430 6429 6.27 6859 116 472 6370 6.90 6842 117 438 6204 6.59 6642 118 456 6093 6.96 6549 119 432 5791 6.94 6223 120 422 5646 6.95 6068 121 393 5447 6.73 5840 122 418 5404 7.18 5822 123 371 5128 6.75 5499 124 388 4904 7.33 5292 125 369 4939 6.95 5308 126 383 4769 7.43 5152 127 366 4768 7.13 5134 128 381 4635 7.60 5016 129 350 4395 7.38 4745 130 349 4316 7.48 4665 131 343 4220 7.52 4563 132 314 4057 7.18 4371 133 337 4057 7.67 4394 134 306 3851 7.36 4157 135 326 3703 8.09 4029 136 304 3667 7.66 3971 137 315 3475 8.31 3790 138 273 3400 7.43 3673 139 305 3318 8.42 3623 140 275 3164 8.00 3439 141 301 3088 8.88 3389 142 253 3060 7.64 3313 143 308 2951 9.45 3259 144 251 2911 7.94 3162 145 290 2812 9.35 3102 146 248 2843 8.02 3091 147 270 2779 8.86 3049 148 257 2656 8.82 2913 149 265 2538 9.45 2803 150 246 2407 9.27 2653