EF02-EM02-Zygote_R1_001.fastp-trim.20220827_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 24201019 lines in total Total number of methylation call strings processed: 48402038 Final Cytosine Methylation Report ================================= Total number of C's analysed: 406931680 Total methylated C's in CpG context: 9053635 Total methylated C's in CHG context: 1764747 Total methylated C's in CHH context: 8639737 Total C to T conversions in CpG context: 50125932 Total C to T conversions in CHG context: 83675818 Total C to T conversions in CHH context: 253671811 C methylated in CpG context: 15.3% C methylated in CHG context: 2.1% C methylated in CHH context: 3.3%