EF01-EM01-Zygote_R1_001.fastp-trim.20220827_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 20296990 lines in total Total number of methylation call strings processed: 40593980 Final Cytosine Methylation Report ================================= Total number of C's analysed: 362573362 Total methylated C's in CpG context: 11633109 Total methylated C's in CHG context: 3949893 Total methylated C's in CHH context: 17367035 Total C to T conversions in CpG context: 36573029 Total C to T conversions in CHG context: 69288024 Total C to T conversions in CHH context: 223762272 C methylated in CpG context: 24.1% C methylated in CHG context: 5.4% C methylated in CHH context: 7.2%