CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 75895 175314 30.21 251209 2 85403 250304 25.44 335707 3 54561 317345 14.67 371906 4 41124 276470 12.95 317594 5 58930 293618 16.72 352548 6 37623 216824 14.79 254447 7 41528 205310 16.82 246838 8 50160 222602 18.39 272762 9 53723 221570 19.51 275293 10 49232 211839 18.86 261071 11 55083 208336 20.91 263419 12 61072 207650 22.73 268722 13 54266 210526 20.49 264792 14 49381 203636 19.52 253017 15 50479 202826 19.93 253305 16 48457 200713 19.45 249170 17 48592 202165 19.38 250757 18 47754 204218 18.95 251972 19 48514 204004 19.21 252518 20 51406 215567 19.26 266973 21 53755 217638 19.81 271393 22 53639 214802 19.98 268441 23 52727 219444 19.37 272171 24 53114 218505 19.55 271619 25 52759 214680 19.73 267439 26 52006 210391 19.82 262397 27 50829 208063 19.63 258892 28 51263 210820 19.56 262083 29 51222 209486 19.65 260708 30 51070 210257 19.54 261327 31 51582 212780 19.51 264362 32 51706 211859 19.62 263565 33 51552 212007 19.56 263559 34 51507 210451 19.66 261958 35 51742 209372 19.82 261114 36 51762 211161 19.69 262923 37 51007 208697 19.64 259704 38 51151 208974 19.66 260125 39 49977 207638 19.40 257615 40 49908 205376 19.55 255284 41 50142 203213 19.79 253355 42 50019 204739 19.63 254758 43 49514 202799 19.62 252313 44 50221 204507 19.72 254728 45 48587 203117 19.30 251704 46 48632 201119 19.47 249751 47 48273 198990 19.52 247263 48 48382 197514 19.68 245896 49 47512 195635 19.54 243147 50 47606 193924 19.71 241530 51 46587 193174 19.43 239761 52 45488 189552 19.35 235040 53 45594 187867 19.53 233461 54 45615 186797 19.63 232412 55 44453 185524 19.33 229977 56 43922 182053 19.44 225975 57 44172 182570 19.48 226742 58 43850 181260 19.48 225110 59 43070 179609 19.34 222679 60 42181 176911 19.25 219092 61 41440 173161 19.31 214601 62 40818 170898 19.28 211716 63 40812 168990 19.45 209802 64 39864 167888 19.19 207752 65 39012 165213 19.10 204225 66 39329 164761 19.27 204090 67 38516 162742 19.14 201258 68 37920 160435 19.12 198355 69 37242 156891 19.18 194133 70 36508 154288 19.13 190796 71 35866 152390 19.05 188256 72 35683 150680 19.15 186363 73 34111 147205 18.81 181316 74 34229 144089 19.20 178318 75 33512 141927 19.10 175439 76 33234 139386 19.25 172620 77 32448 135653 19.30 168101 78 31790 133781 19.20 165571 79 31286 132140 19.14 163426 80 30210 128996 18.98 159206 81 29845 127295 18.99 157140 82 29391 124719 19.07 154110 83 28942 122292 19.14 151234 84 28218 120650 18.96 148868 85 27824 118442 19.02 146266 86 27109 115398 19.02 142507 87 26835 113923 19.06 140758 88 26094 111907 18.91 138001 89 25880 110442 18.98 136322 90 25114 108488 18.80 133602 91 24790 105776 18.99 130566 92 23987 102549 18.96 126536 93 23910 101093 19.13 125003 94 22910 98087 18.93 120997 95 22919 96595 19.18 119514 96 22029 95076 18.81 117105 97 22127 92986 19.22 115113 98 21434 90957 19.07 112391 99 21081 89585 19.05 110666 100 20265 87893 18.74 108158 101 19876 86194 18.74 106070 102 19614 84223 18.89 103837 103 19081 83206 18.65 102287 104 18779 80545 18.91 99324 105 18193 78422 18.83 96615 106 17775 77500 18.66 95275 107 17228 74152 18.85 91380 108 17031 72778 18.96 89809 109 16358 71832 18.55 88190 110 16497 70401 18.98 86898 111 15795 68517 18.73 84312 112 15608 66595 18.99 82203 113 15195 65123 18.92 80318 114 14648 64326 18.55 78974 115 14178 62561 18.48 76739 116 13792 61290 18.37 75082 117 13595 60692 18.30 74287 118 13517 58925 18.66 72442 119 13002 57360 18.48 70362 120 12798 56165 18.56 68963 121 12280 55243 18.19 67523 122 12141 54323 18.27 66464 123 12053 52533 18.66 64586 124 11629 51572 18.40 63201 125 11773 50317 18.96 62090 126 11174 49223 18.50 60397 127 10956 48252 18.50 59208 128 10307 46336 18.20 56643 129 10359 45464 18.56 55823 130 9877 44812 18.06 54689 131 9780 43549 18.34 53329 132 9415 42214 18.24 51629 133 9064 40700 18.21 49764 134 8966 40125 18.26 49091 135 8739 38934 18.33 47673 136 8710 37764 18.74 46474 137 8521 37338 18.58 45859 138 8131 36438 18.24 44569 139 8038 35770 18.35 43808 140 7633 34856 17.96 42489 141 7499 33797 18.16 41296 142 7022 32600 17.72 39622 143 7069 32082 18.06 39151 144 6908 31421 18.02 38329 145 6696 31128 17.70 37824 146 6612 29755 18.18 36367 147 6501 29874 17.87 36375 148 6177 29224 17.45 35401 149 6039 27864 17.81 33903 150 5693 27502 17.15 33195 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 126630 778579 13.99 905209 2 91498 279758 24.65 371256 3 70784 398301 15.09 469085 4 37735 349586 9.74 387321 5 20645 478683 4.13 499328 6 13743 501118 2.67 514861 7 11498 388018 2.88 399516 8 12336 402991 2.97 415327 9 12016 396025 2.94 408041 10 13312 374131 3.44 387443 11 19577 368560 5.04 388137 12 11260 377233 2.90 388493 13 10862 379929 2.78 390791 14 9752 372441 2.55 382193 15 10097 366503 2.68 376600 16 10633 361259 2.86 371892 17 9334 373603 2.44 382937 18 9451 377097 2.44 386548 19 9548 377813 2.46 387361 20 9818 383327 2.50 393145 21 9898 387986 2.49 397884 22 9937 393412 2.46 403349 23 9688 390464 2.42 400152 24 9405 380140 2.41 389545 25 9692 384189 2.46 393881 26 9487 373557 2.48 383044 27 9617 376027 2.49 385644 28 9656 380005 2.48 389661 29 9714 385908 2.46 395622 30 9821 388248 2.47 398069 31 10167 387639 2.56 397806 32 10042 384216 2.55 394258 33 10133 390492 2.53 400625 34 10074 382418 2.57 392492 35 9864 381282 2.52 391146 36 10024 379749 2.57 389773 37 10095 388334 2.53 398429 38 9987 379696 2.56 389683 39 10106 379864 2.59 389970 40 9825 376482 2.54 386307 41 10024 375488 2.60 385512 42 9894 372857 2.58 382751 43 10231 377344 2.64 387575 44 10000 370041 2.63 380041 45 10331 374207 2.69 384538 46 10244 367474 2.71 377718 47 10432 364550 2.78 374982 48 10319 360968 2.78 371287 49 10543 362334 2.83 372877 50 10323 355890 2.82 366213 51 10450 354651 2.86 365101 52 10174 350041 2.82 360215 53 10490 349052 2.92 359542 54 10453 343602 2.95 354055 55 10489 344609 2.95 355098 56 10358 337237 2.98 347595 57 10547 336548 3.04 347095 58 10272 331934 3.00 342206 59 10378 327237 3.07 337615 60 10200 322710 3.06 332910 61 10185 321911 3.07 332096 62 10043 314643 3.09 324686 63 10031 313336 3.10 323367 64 9853 307958 3.10 317811 65 9717 304336 3.09 314053 66 9796 299317 3.17 309113 67 9800 297726 3.19 307526 68 9419 290953 3.14 300372 69 9467 288740 3.17 298207 70 9449 282885 3.23 292334 71 9121 277504 3.18 286625 72 9289 272505 3.30 281794 73 9059 270454 3.24 279513 74 8897 262753 3.28 271650 75 9038 259775 3.36 268813 76 8587 254601 3.26 263188 77 8593 250781 3.31 259374 78 8411 245613 3.31 254024 79 8462 242465 3.37 250927 80 8243 235685 3.38 243928 81 8221 231999 3.42 240220 82 7935 228117 3.36 236052 83 7924 222408 3.44 230332 84 7785 217305 3.46 225090 85 7685 214814 3.45 222499 86 7466 209806 3.44 217272 87 7185 206709 3.36 213894 88 7436 201897 3.55 209333 89 7244 197569 3.54 204813 90 7085 194947 3.51 202032 91 6998 191078 3.53 198076 92 6807 186130 3.53 192937 93 6731 182375 3.56 189106 94 6530 179579 3.51 186109 95 6243 173279 3.48 179522 96 6273 169697 3.56 175970 97 6297 166883 3.64 173180 98 6155 161658 3.67 167813 99 5910 158447 3.60 164357 100 5876 155650 3.64 161526 101 5775 153200 3.63 158975 102 5669 150774 3.62 156443 103 5513 144933 3.66 150446 104 5544 141654 3.77 147198 105 5278 138528 3.67 143806 106 5321 136065 3.76 141386 107 5053 132256 3.68 137309 108 5182 128822 3.87 134004 109 4766 126988 3.62 131754 110 4810 123369 3.75 128179 111 4673 120539 3.73 125212 112 4622 118025 3.77 122647 113 4424 115259 3.70 119683 114 4448 112688 3.80 117136 115 4283 109495 3.76 113778 116 4176 106874 3.76 111050 117 4120 105473 3.76 109593 118 4182 102147 3.93 106329 119 3993 100171 3.83 104164 120 3919 97703 3.86 101622 121 3733 95525 3.76 99258 122 3601 93328 3.72 96929 123 3558 91927 3.73 95485 124 3568 88840 3.86 92408 125 3439 86428 3.83 89867 126 3409 84167 3.89 87576 127 3244 82752 3.77 85996 128 3294 80899 3.91 84193 129 3092 78715 3.78 81807 130 3139 76254 3.95 79393 131 2980 74884 3.83 77864 132 2973 72883 3.92 75856 133 2878 71024 3.89 73902 134 2880 68927 4.01 71807 135 2895 67709 4.10 70604 136 2745 65979 3.99 68724 137 2608 64918 3.86 67526 138 2557 62288 3.94 64845 139 2479 60746 3.92 63225 140 2427 59158 3.94 61585 141 2412 57624 4.02 60036 142 2222 56060 3.81 58282 143 2340 54530 4.11 56870 144 2150 53729 3.85 55879 145 2187 52326 4.01 54513 146 2010 50871 3.80 52881 147 2002 49726 3.87 51728 148 2054 48331 4.08 50385 149 1995 48240 3.97 50235 150 1902 46516 3.93 48418 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 383617 916247 29.51 1299864 2 345815 1170516 22.81 1516331 3 272090 1151088 19.12 1423178 4 194331 1194369 13.99 1388700 5 150903 1406644 9.69 1557547 6 123323 1505901 7.57 1629224 7 133546 1688591 7.33 1822137 8 123906 1725685 6.70 1849591 9 127238 1607435 7.33 1734673 10 110891 1563770 6.62 1674661 11 134167 1530978 8.06 1665145 12 116501 1557886 6.96 1674387 13 124282 1564438 7.36 1688720 14 114665 1569545 6.81 1684210 15 131074 1569344 7.71 1700418 16 120030 1553287 7.17 1673317 17 125956 1533697 7.59 1659653 18 111951 1531321 6.81 1643272 19 130071 1523210 7.87 1653281 20 119784 1548990 7.18 1668774 21 129160 1541253 7.73 1670413 22 117872 1550840 7.06 1668712 23 129799 1545427 7.75 1675226 24 114551 1538696 6.93 1653247 25 125751 1545057 7.53 1670808 26 115773 1556963 6.92 1672736 27 124111 1565513 7.35 1689624 28 111573 1588661 6.56 1700234 29 122052 1581655 7.16 1703707 30 110751 1587450 6.52 1698201 31 120751 1570276 7.14 1691027 32 109485 1564681 6.54 1674166 33 116257 1557578 6.95 1673835 34 106604 1558362 6.40 1664966 35 114570 1546113 6.90 1660683 36 101787 1549276 6.16 1651063 37 109665 1547034 6.62 1656699 38 100085 1543155 6.09 1643240 39 106136 1521737 6.52 1627873 40 95675 1522142 5.91 1617817 41 102477 1518007 6.32 1620484 42 92659 1518366 5.75 1611025 43 99270 1509825 6.17 1609095 44 90916 1503379 5.70 1594295 45 95320 1488437 6.02 1583757 46 87308 1483690 5.56 1570998 47 94037 1471881 6.01 1565918 48 83876 1462087 5.43 1545963 49 88255 1452247 5.73 1540502 50 82455 1446178 5.39 1528633 51 85592 1431915 5.64 1517507 52 78555 1420530 5.24 1499085 53 81648 1408616 5.48 1490264 54 76716 1392366 5.22 1469082 55 78330 1376898 5.38 1455228 56 73140 1364635 5.09 1437775 57 74056 1345715 5.22 1419771 58 69678 1331147 4.97 1400825 59 71780 1312397 5.19 1384177 60 65696 1288760 4.85 1354456 61 66314 1271644 4.96 1337958 62 63560 1261115 4.80 1324675 63 63713 1239068 4.89 1302781 64 59463 1222087 4.64 1281550 65 60445 1203536 4.78 1263981 66 56562 1188830 4.54 1245392 67 57348 1176523 4.65 1233871 68 53502 1154051 4.43 1207553 69 53512 1141501 4.48 1195013 70 50898 1123099 4.34 1173997 71 50791 1102862 4.40 1153653 72 48506 1085375 4.28 1133881 73 48123 1070294 4.30 1118417 74 46275 1056372 4.20 1102647 75 45624 1030980 4.24 1076604 76 43075 1014548 4.07 1057623 77 43102 998247 4.14 1041349 78 41549 985275 4.05 1026824 79 41574 965077 4.13 1006651 80 39171 945299 3.98 984470 81 38843 926013 4.03 964856 82 37715 912784 3.97 950499 83 37281 890104 4.02 927385 84 35121 874766 3.86 909887 85 34923 857529 3.91 892452 86 33867 842173 3.87 876040 87 33640 823734 3.92 857374 88 31995 810208 3.80 842203 89 31560 795061 3.82 826621 90 30998 774341 3.85 805339 91 30304 757349 3.85 787653 92 29557 743485 3.82 773042 93 28766 726967 3.81 755733 94 28107 712795 3.79 740902 95 27905 699166 3.84 727071 96 26850 685281 3.77 712131 97 26544 672389 3.80 698933 98 25565 653453 3.76 679018 99 25398 639655 3.82 665053 100 24457 626539 3.76 650996 101 23954 612842 3.76 636796 102 23597 602114 3.77 625711 103 23218 590428 3.78 613646 104 22339 575129 3.74 597468 105 21897 563474 3.74 585371 106 21382 547810 3.76 569192 107 21193 534616 3.81 555809 108 20515 525312 3.76 545827 109 20153 511324 3.79 531477 110 19901 500897 3.82 520798 111 19365 493273 3.78 512638 112 18863 477907 3.80 496770 113 18330 467480 3.77 485810 114 18145 455727 3.83 473872 115 17842 447212 3.84 465054 116 16959 436612 3.74 453571 117 16891 425701 3.82 442592 118 16300 415073 3.78 431373 119 15944 405459 3.78 421403 120 15603 396606 3.79 412209 121 15456 386069 3.85 401525 122 14892 378062 3.79 392954 123 14732 368845 3.84 383577 124 14404 359666 3.85 374070 125 13930 351204 3.82 365134 126 13540 341426 3.81 354966 127 13292 333922 3.83 347214 128 13112 326587 3.86 339699 129 12496 318786 3.77 331282 130 12543 309744 3.89 322287 131 11952 303345 3.79 315297 132 11992 295492 3.90 307484 133 11480 289001 3.82 300481 134 11450 282142 3.90 293592 135 11066 274478 3.88 285544 136 10763 268292 3.86 279055 137 10539 260885 3.88 271424 138 10146 255091 3.83 265237 139 10003 247623 3.88 257626 140 9630 241222 3.84 250852 141 9501 235198 3.88 244699 142 9256 229374 3.88 238630 143 8992 222711 3.88 231703 144 8722 218328 3.84 227050 145 8498 213725 3.82 222223 146 8215 209527 3.77 217742 147 8020 205221 3.76 213241 148 8118 199690 3.91 207808 149 8166 194427 4.03 202593 150 7720 189121 3.92 196841 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 7434 21860 25.38 29294 2 8297 31451 20.87 39748 3 5542 40887 11.94 46429 4 4500 34075 11.67 38575 5 5608 36864 13.20 42472 6 3804 24897 13.25 28701 7 3783 22678 14.30 26461 8 4313 22469 16.10 26782 9 4310 21533 16.68 25843 10 4257 20935 16.90 25192 11 4766 20143 19.13 24909 12 5937 19756 23.11 25693 13 5032 19212 20.76 24244 14 3883 17796 17.91 21679 15 3758 17130 17.99 20888 16 3823 17621 17.83 21444 17 3873 17360 18.24 21233 18 3492 15979 17.93 19471 19 3343 15568 17.68 18911 20 3431 15854 17.79 19285 21 3443 15684 18.00 19127 22 3397 15336 18.13 18733 23 3325 14902 18.24 18227 24 3252 14318 18.51 17570 25 3165 14181 18.25 17346 26 3074 13879 18.13 16953 27 2877 12928 18.20 15805 28 2877 13267 17.82 16144 29 2676 12451 17.69 15127 30 2642 12076 17.95 14718 31 2527 11959 17.44 14486 32 2569 11395 18.40 13964 33 2376 10968 17.81 13344 34 2428 10709 18.48 13137 35 2441 10084 19.49 12525 36 2346 10139 18.79 12485 37 2207 10136 17.88 12343 38 2160 9550 18.45 11710 39 2126 9263 18.67 11389 40 2069 8935 18.80 11004 41 1972 8437 18.95 10409 42 1832 8143 18.37 9975 43 1896 8294 18.61 10190 44 1821 7873 18.78 9694 45 1744 7892 18.10 9636 46 1634 7425 18.04 9059 47 1616 7307 18.11 8923 48 1580 6951 18.52 8531 49 1589 6905 18.71 8494 50 1516 6652 18.56 8168 51 1424 6723 17.48 8147 52 1324 6140 17.74 7464 53 1415 6002 19.08 7417 54 1223 5912 17.14 7135 55 1279 5662 18.43 6941 56 1195 5342 18.28 6537 57 1222 5437 18.35 6659 58 1197 5386 18.18 6583 59 1160 5132 18.44 6292 60 1116 5123 17.89 6239 61 1091 4731 18.74 5822 62 1031 4579 18.38 5610 63 953 4572 17.25 5525 64 966 4307 18.32 5273 65 930 4152 18.30 5082 66 900 4208 17.62 5108 67 846 4145 16.95 4991 68 892 4022 18.15 4914 69 901 3853 18.95 4754 70 823 3710 18.16 4533 71 789 3930 16.72 4719 72 754 3752 16.73 4506 73 770 3525 17.93 4295 74 723 3184 18.51 3907 75 735 3267 18.37 4002 76 679 3150 17.73 3829 77 688 2976 18.78 3664 78 608 2834 17.66 3442 79 614 2833 17.81 3447 80 606 2804 17.77 3410 81 582 2615 18.20 3197 82 582 2521 18.76 3103 83 569 2551 18.24 3120 84 519 2499 17.20 3018 85 524 2472 17.49 2996 86 473 2401 16.46 2874 87 469 2228 17.39 2697 88 498 2199 18.46 2697 89 455 2175 17.30 2630 90 485 2084 18.88 2569 91 442 2118 17.27 2560 92 427 2001 17.59 2428 93 419 2050 16.97 2469 94 402 1827 18.03 2229 95 398 1788 18.21 2186 96 346 1810 16.05 2156 97 364 1707 17.58 2071 98 352 1665 17.45 2017 99 371 1608 18.75 1979 100 305 1570 16.27 1875 101 275 1674 14.11 1949 102 296 1497 16.51 1793 103 301 1299 18.81 1600 104 309 1395 18.13 1704 105 315 1390 18.48 1705 106 246 1338 15.53 1584 107 265 1241 17.60 1506 108 264 1244 17.51 1508 109 248 1244 16.62 1492 110 279 1215 18.67 1494 111 252 1131 18.22 1383 112 201 1147 14.91 1348 113 239 1080 18.12 1319 114 236 1191 16.54 1427 115 211 1046 16.79 1257 116 207 1030 16.73 1237 117 223 1006 18.14 1229 118 194 910 17.57 1104 119 203 905 18.32 1108 120 176 917 16.10 1093 121 172 905 15.97 1077 122 176 861 16.97 1037 123 154 808 16.01 962 124 174 787 18.11 961 125 163 794 17.03 957 126 154 757 16.90 911 127 169 764 18.11 933 128 145 691 17.34 836 129 137 720 15.99 857 130 130 699 15.68 829 131 142 712 16.63 854 132 115 605 15.97 720 133 108 610 15.04 718 134 136 623 17.92 759 135 121 647 15.76 768 136 109 545 16.67 654 137 111 586 15.93 697 138 124 536 18.79 660 139 113 586 16.17 699 140 106 540 16.41 646 141 96 511 15.82 607 142 90 469 16.10 559 143 109 465 18.99 574 144 76 473 13.84 549 145 93 441 17.42 534 146 94 448 17.34 542 147 94 462 16.91 556 148 83 445 15.72 528 149 74 402 15.55 476 150 75 397 15.89 472 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 13622 114497 10.63 128119 2 8101 34155 19.17 42256 3 6819 43135 13.65 49954 4 4522 38803 10.44 43325 5 2204 55343 3.83 57547 6 1602 58327 2.67 59929 7 1221 39424 3.00 40645 8 1359 38173 3.44 39532 9 1176 36654 3.11 37830 10 1528 33708 4.34 35236 11 3006 33030 8.34 36036 12 1115 32597 3.31 33712 13 1059 31839 3.22 32898 14 820 30676 2.60 31496 15 937 29008 3.13 29945 16 1135 27891 3.91 29026 17 792 27978 2.75 28770 18 806 28428 2.76 29234 19 753 26433 2.77 27186 20 739 25902 2.77 26641 21 666 25524 2.54 26190 22 688 25530 2.62 26218 23 638 24670 2.52 25308 24 602 23860 2.46 24462 25 596 23335 2.49 23931 26 545 22294 2.39 22839 27 522 22192 2.30 22714 28 559 21875 2.49 22434 29 559 21242 2.56 21801 30 535 20616 2.53 21151 31 490 19447 2.46 19937 32 484 19093 2.47 19577 33 494 18912 2.55 19406 34 424 18046 2.30 18470 35 466 17601 2.58 18067 36 430 16919 2.48 17349 37 440 16946 2.53 17386 38 437 16152 2.63 16589 39 431 16075 2.61 16506 40 359 15224 2.30 15583 41 361 14943 2.36 15304 42 352 14395 2.39 14747 43 369 14136 2.54 14505 44 362 13468 2.62 13830 45 355 13353 2.59 13708 46 330 12628 2.55 12958 47 338 12103 2.72 12441 48 331 11980 2.69 12311 49 349 11715 2.89 12064 50 308 11489 2.61 11797 51 303 11109 2.66 11412 52 315 10480 2.92 10795 53 296 10147 2.83 10443 54 259 10040 2.51 10299 55 265 9759 2.64 10024 56 290 9487 2.97 9777 57 255 9411 2.64 9666 58 265 9219 2.79 9484 59 261 9185 2.76 9446 60 241 8267 2.83 8508 61 245 8137 2.92 8382 62 217 7843 2.69 8060 63 226 7683 2.86 7909 64 223 7352 2.94 7575 65 200 7251 2.68 7451 66 188 6960 2.63 7148 67 216 6941 3.02 7157 68 190 6602 2.80 6792 69 186 6601 2.74 6787 70 195 6242 3.03 6437 71 188 5983 3.05 6171 72 190 5814 3.16 6004 73 177 5841 2.94 6018 74 170 5670 2.91 5840 75 158 5332 2.88 5490 76 164 5248 3.03 5412 77 145 4958 2.84 5103 78 141 4846 2.83 4987 79 137 4829 2.76 4966 80 141 4594 2.98 4735 81 131 4630 2.75 4761 82 113 4276 2.57 4389 83 122 4175 2.84 4297 84 118 4023 2.85 4141 85 109 4190 2.54 4299 86 114 3868 2.86 3982 87 89 3846 2.26 3935 88 128 3646 3.39 3774 89 104 3749 2.70 3853 90 99 3677 2.62 3776 91 114 3430 3.22 3544 92 97 3282 2.87 3379 93 89 3071 2.82 3160 94 93 3110 2.90 3203 95 99 2931 3.27 3030 96 84 2784 2.93 2868 97 75 2764 2.64 2839 98 79 2570 2.98 2649 99 75 2597 2.81 2672 100 71 2564 2.69 2635 101 65 2486 2.55 2551 102 69 2426 2.77 2495 103 52 2260 2.25 2312 104 52 2211 2.30 2263 105 62 2125 2.83 2187 106 66 2068 3.09 2134 107 69 1980 3.37 2049 108 61 1951 3.03 2012 109 74 1839 3.87 1913 110 60 1834 3.17 1894 111 70 1781 3.78 1851 112 52 1714 2.94 1766 113 50 1703 2.85 1753 114 36 1550 2.27 1586 115 51 1676 2.95 1727 116 46 1550 2.88 1596 117 62 1466 4.06 1528 118 33 1484 2.18 1517 119 45 1479 2.95 1524 120 40 1396 2.79 1436 121 46 1449 3.08 1495 122 39 1339 2.83 1378 123 29 1217 2.33 1246 124 21 1239 1.67 1260 125 38 1193 3.09 1231 126 34 1162 2.84 1196 127 38 1112 3.30 1150 128 27 1089 2.42 1116 129 40 1045 3.69 1085 130 39 1028 3.66 1067 131 35 996 3.39 1031 132 22 1027 2.10 1049 133 38 926 3.94 964 134 23 914 2.45 937 135 23 958 2.34 981 136 29 866 3.24 895 137 25 862 2.82 887 138 23 759 2.94 782 139 27 792 3.30 819 140 23 727 3.07 750 141 15 717 2.05 732 142 17 691 2.40 708 143 27 663 3.91 690 144 28 656 4.09 684 145 33 624 5.02 657 146 20 632 3.07 652 147 13 625 2.04 638 148 22 606 3.50 628 149 16 632 2.47 648 150 21 552 3.66 573 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 33879 105073 24.38 138952 2 30000 143056 17.34 173056 3 24393 128721 15.93 153114 4 18536 122767 13.12 141303 5 13498 149481 8.28 162979 6 10833 159600 6.36 170433 7 10189 176021 5.47 186210 8 10512 171479 5.78 181991 9 8794 159388 5.23 168182 10 7393 152542 4.62 159935 11 9182 144030 5.99 153212 12 7987 142867 5.29 150854 13 7798 138209 5.34 146007 14 6773 136100 4.74 142873 15 8123 132747 5.77 140870 16 8007 126970 5.93 134977 17 7247 124167 5.51 131414 18 6246 120881 4.91 127127 19 7215 118202 5.75 125417 20 6226 116530 5.07 122756 21 6532 110493 5.58 117025 22 5774 109514 5.01 115288 23 6565 106766 5.79 113331 24 5390 103530 4.95 108920 25 6256 102479 5.75 108735 26 5337 100517 5.04 105854 27 5934 98377 5.69 104311 28 5019 97844 4.88 102863 29 5694 94203 5.70 99897 30 4843 91733 5.01 96576 31 5509 88961 5.83 94470 32 4763 86983 5.19 91746 33 5189 84417 5.79 89606 34 4489 82658 5.15 87147 35 5189 79329 6.14 84518 36 4250 77930 5.17 82180 37 5074 75852 6.27 80926 38 4140 74077 5.29 78217 39 4751 70899 6.28 75650 40 3987 70089 5.38 74076 41 4473 67498 6.22 71971 42 3836 66892 5.42 70728 43 4360 64790 6.31 69150 44 3769 62859 5.66 66628 45 4025 60029 6.28 64054 46 3577 58817 5.73 62394 47 4035 56702 6.64 60737 48 3407 56116 5.72 59523 49 3626 53647 6.33 57273 50 3320 52893 5.91 56213 51 3618 50595 6.67 54213 52 3136 49551 5.95 52687 53 3339 47820 6.53 51159 54 3046 46969 6.09 50015 55 3221 45359 6.63 48580 56 2965 44180 6.29 47145 57 3039 42544 6.67 45583 58 2773 42126 6.18 44899 59 3115 40823 7.09 43938 60 2528 39188 6.06 41716 61 2646 38279 6.47 40925 62 2448 37302 6.16 39750 63 2531 35508 6.65 38039 64 2317 34578 6.28 36895 65 2373 33411 6.63 35784 66 2150 32839 6.14 34989 67 2282 31829 6.69 34111 68 2054 30879 6.24 32933 69 2104 30366 6.48 32470 70 1992 29451 6.34 31443 71 2068 28120 6.85 30188 72 1834 27560 6.24 29394 73 1880 27113 6.48 28993 74 1743 26811 6.10 28554 75 1747 25151 6.49 26898 76 1616 24671 6.15 26287 77 1572 23820 6.19 25392 78 1490 23538 5.95 25028 79 1528 22471 6.37 23999 80 1399 21779 6.04 23178 81 1387 21176 6.15 22563 82 1304 20855 5.88 22159 83 1283 19689 6.12 20972 84 1161 19316 5.67 20477 85 1189 18532 6.03 19721 86 1140 18224 5.89 19364 87 1158 17480 6.21 18638 88 1034 17123 5.69 18157 89 1028 16802 5.77 17830 90 959 16087 5.63 17046 91 994 15611 5.99 16605 92 920 15226 5.70 16146 93 874 14699 5.61 15573 94 816 14236 5.42 15052 95 867 13950 5.85 14817 96 787 13593 5.47 14380 97 803 13020 5.81 13823 98 738 12548 5.55 13286 99 737 12307 5.65 13044 100 732 11899 5.80 12631 101 718 11336 5.96 12054 102 665 11095 5.65 11760 103 689 10977 5.91 11666 104 622 10465 5.61 11087 105 630 10452 5.68 11082 106 578 9948 5.49 10526 107 623 9765 6.00 10388 108 536 9490 5.35 10026 109 619 8906 6.50 9525 110 571 8705 6.16 9276 111 555 8419 6.18 8974 112 496 8184 5.71 8680 113 501 8006 5.89 8507 114 472 7853 5.67 8325 115 516 7469 6.46 7985 116 480 7355 6.13 7835 117 513 7154 6.69 7667 118 438 6845 6.01 7283 119 457 6764 6.33 7221 120 431 6484 6.23 6915 121 458 6296 6.78 6754 122 409 6166 6.22 6575 123 380 6004 5.95 6384 124 405 5746 6.58 6151 125 384 5693 6.32 6077 126 367 5405 6.36 5772 127 372 5197 6.68 5569 128 365 5080 6.70 5445 129 362 4890 6.89 5252 130 359 4768 7.00 5127 131 354 4647 7.08 5001 132 355 4563 7.22 4918 133 365 4295 7.83 4660 134 318 4325 6.85 4643 135 330 4209 7.27 4539 136 313 4128 7.05 4441 137 327 3796 7.93 4123 138 286 3822 6.96 4108 139 300 3726 7.45 4026 140 274 3494 7.27 3768 141 297 3484 7.86 3781 142 290 3402 7.85 3692 143 314 3227 8.87 3541 144 302 3140 8.77 3442 145 268 3111 7.93 3379 146 298 3164 8.61 3462 147 270 2961 8.36 3231 148 267 2890 8.46 3157 149 276 2852 8.82 3128 150 252 2734 8.44 2986