CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 145549 277817 34.38 423366 2 163109 435936 27.23 599045 3 105051 538535 16.32 643586 4 75152 496340 13.15 571492 5 106605 519805 17.02 626410 6 73004 372331 16.39 445335 7 80041 349673 18.63 429714 8 101685 392134 20.59 493819 9 106118 390826 21.35 496944 10 100880 376324 21.14 477204 11 118759 378410 23.89 497169 12 137937 374080 26.94 512017 13 120016 377695 24.11 497711 14 104352 373064 21.86 477416 15 104741 371505 21.99 476246 16 102968 369270 21.80 472238 17 104168 378196 21.60 482364 18 101422 379059 21.11 480481 19 103169 380084 21.35 483253 20 108095 397868 21.36 505963 21 113397 402559 21.98 515956 22 113486 396182 22.27 509668 23 111999 402897 21.75 514896 24 109923 399640 21.57 509563 25 110376 392362 21.95 502738 26 108858 386071 21.99 494929 27 107124 384884 21.77 492008 28 107141 383125 21.85 490266 29 107482 384824 21.83 492306 30 107817 388453 21.73 496270 31 108379 391898 21.66 500277 32 108515 388557 21.83 497072 33 108304 388287 21.81 496591 34 108822 384513 22.06 493335 35 109151 386492 22.02 495643 36 108572 387692 21.88 496264 37 108666 383346 22.09 492012 38 107838 383510 21.95 491348 39 106861 383958 21.77 490819 40 106483 377753 21.99 484236 41 107067 376846 22.13 483913 42 105867 378215 21.87 484082 43 106437 376452 22.04 482889 44 107224 378320 22.08 485544 45 105124 374109 21.94 479233 46 103693 372064 21.80 475757 47 103650 368459 21.95 472109 48 103556 368597 21.93 472153 49 102211 364246 21.91 466457 50 102620 363771 22.00 466391 51 100735 358656 21.93 459391 52 98579 355328 21.72 453907 53 99442 353022 21.98 452464 54 98242 349696 21.93 447938 55 96705 346535 21.82 443240 56 96217 342960 21.91 439177 57 95595 342552 21.82 438147 58 94771 339970 21.80 434741 59 92972 335829 21.68 428801 60 91739 331675 21.67 423414 61 91094 324106 21.94 415200 62 89069 321938 21.67 411007 63 88945 319281 21.79 408226 64 88433 315871 21.87 404304 65 86279 311276 21.70 397555 66 85368 308837 21.66 394205 67 85280 306079 21.79 391359 68 83153 300363 21.68 383516 69 81666 295695 21.64 377361 70 80384 290314 21.68 370698 71 79670 287029 21.73 366699 72 78371 282585 21.71 360956 73 76367 276326 21.65 352693 74 75487 272164 21.71 347651 75 74805 267869 21.83 342674 76 72386 263624 21.54 336010 77 71482 258021 21.69 329503 78 69803 252522 21.66 322325 79 68557 248752 21.61 317309 80 67213 244982 21.53 312195 81 66985 240103 21.81 307088 82 64578 236092 21.48 300670 83 63855 231297 21.63 295152 84 62481 227376 21.56 289857 85 61172 223496 21.49 284668 86 60033 219489 21.48 279522 87 59033 214946 21.55 273979 88 57640 211379 21.43 269019 89 56593 207330 21.44 263923 90 55335 204047 21.33 259382 91 54129 198661 21.41 252790 92 53092 194454 21.45 247546 93 52114 190172 21.51 242286 94 50529 184104 21.54 234633 95 49263 181091 21.39 230354 96 48214 178109 21.30 226323 97 46891 173513 21.28 220404 98 46738 169550 21.61 216288 99 44734 165891 21.24 210625 100 44050 161996 21.38 206046 101 42848 158957 21.23 201805 102 42067 154901 21.36 196968 103 40684 152072 21.11 192756 104 40122 147803 21.35 187925 105 38955 144747 21.21 183702 106 38251 141411 21.29 179662 107 37095 137414 21.26 174509 108 36030 134684 21.11 170714 109 35092 132087 20.99 167179 110 34181 128844 20.97 163025 111 33740 125707 21.16 159447 112 32670 122511 21.05 155181 113 32097 119856 21.12 151953 114 31033 116858 20.98 147891 115 30575 113774 21.18 144349 116 29728 111278 21.08 141006 117 28990 109089 21.00 138079 118 28067 106107 20.92 134174 119 27151 103111 20.84 130262 120 26892 101214 20.99 128106 121 26205 98299 21.05 124504 122 25283 96285 20.80 121568 123 24502 94085 20.66 118587 124 24460 91857 21.03 116317 125 24012 90161 21.03 114173 126 22976 87810 20.74 110786 127 22401 84787 20.90 107188 128 21394 82533 20.59 103927 129 21155 80210 20.87 101365 130 20354 78809 20.53 99163 131 19883 76544 20.62 96427 132 19188 74367 20.51 93555 133 18532 71899 20.49 90431 134 18329 70420 20.65 88749 135 17913 68905 20.63 86818 136 17538 66747 20.81 84285 137 17044 64772 20.83 81816 138 16608 63466 20.74 80074 139 15992 62370 20.41 78362 140 15394 60230 20.36 75624 141 14582 58459 19.96 73041 142 14145 57206 19.82 71351 143 13782 55958 19.76 69740 144 13518 54050 20.01 67568 145 13269 53032 20.01 66301 146 12918 52146 19.85 65064 147 12802 51242 19.99 64044 148 12302 49941 19.76 62243 149 11623 47546 19.64 59169 150 11149 46355 19.39 57504 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 234936 1358552 14.74 1593488 2 169043 477448 26.15 646491 3 152531 682785 18.26 835316 4 69371 614653 10.14 684024 5 40467 855065 4.52 895532 6 25603 916904 2.72 942507 7 20957 671998 3.02 692955 8 24229 700575 3.34 724804 9 22497 708229 3.08 730726 10 29324 672580 4.18 701904 11 48837 663974 6.85 712811 12 23470 689146 3.29 712616 13 22509 700514 3.11 723023 14 18644 691542 2.63 710186 15 19985 671452 2.89 691437 16 23269 666076 3.38 689345 17 19038 697102 2.66 716140 18 19861 711473 2.72 731334 19 19129 695849 2.68 714978 20 19423 707586 2.67 727009 21 19035 714948 2.59 733983 22 18788 725628 2.52 744416 23 18828 719285 2.55 738113 24 18183 697640 2.54 715823 25 18278 705696 2.52 723974 26 17727 687681 2.51 705408 27 18214 691331 2.57 709545 28 18323 702099 2.54 720422 29 17873 708118 2.46 725991 30 18480 712248 2.53 730728 31 18858 715691 2.57 734549 32 18591 706673 2.56 725264 33 18861 721192 2.55 740053 34 18654 706805 2.57 725459 35 18265 701581 2.54 719846 36 18468 701980 2.56 720448 37 19106 716847 2.60 735953 38 18656 703572 2.58 722228 39 19218 706625 2.65 725843 40 18590 697885 2.59 716475 41 19146 702290 2.65 721436 42 18899 694548 2.65 713447 43 19390 698471 2.70 717861 44 18836 686737 2.67 705573 45 19497 695860 2.73 715357 46 19321 685483 2.74 704804 47 19563 679850 2.80 699413 48 19816 672676 2.86 692492 49 19964 678100 2.86 698064 50 19346 665745 2.82 685091 51 20057 663884 2.93 683941 52 19699 656234 2.91 675933 53 20093 658422 2.96 678515 54 19683 644046 2.97 663729 55 20203 646600 3.03 666803 56 20066 634169 3.07 654235 57 20190 636555 3.07 656745 58 19901 623708 3.09 643609 59 20154 618431 3.16 638585 60 20051 610247 3.18 630298 61 20348 611868 3.22 632216 62 19561 593037 3.19 612598 63 19859 591528 3.25 611387 64 20041 581788 3.33 601829 65 19774 577728 3.31 597502 66 19565 568975 3.32 588540 67 19833 565174 3.39 585007 68 19251 551294 3.37 570545 69 19434 547976 3.43 567410 70 19347 537290 3.48 556637 71 18860 525240 3.47 544100 72 18814 518940 3.50 537754 73 18832 513340 3.54 532172 74 18509 501230 3.56 519739 75 18832 495067 3.66 513899 76 18226 484910 3.62 503136 77 18059 476898 3.65 494957 78 17835 468768 3.67 486603 79 17808 462475 3.71 480283 80 17517 449237 3.75 466754 81 17564 442291 3.82 459855 82 16984 433384 3.77 450368 83 17028 424992 3.85 442020 84 16546 415463 3.83 432009 85 16537 411084 3.87 427621 86 16306 399702 3.92 416008 87 16068 392237 3.94 408305 88 15676 384013 3.92 399689 89 15491 376719 3.95 392210 90 15392 370546 3.99 385938 91 15080 361714 4.00 376794 92 14594 354270 3.96 368864 93 14776 348310 4.07 363086 94 14637 343123 4.09 357760 95 13979 329603 4.07 343582 96 13721 320731 4.10 334452 97 13789 315379 4.19 329168 98 13298 305745 4.17 319043 99 13119 300994 4.18 314113 100 12957 294271 4.22 307228 101 12667 289525 4.19 302192 102 12665 282901 4.28 295566 103 12172 273277 4.26 285449 104 11683 265301 4.22 276984 105 11751 259932 4.33 271683 106 11578 252981 4.38 264559 107 11267 246316 4.37 257583 108 11069 240517 4.40 251586 109 11023 235876 4.46 246899 110 10594 229059 4.42 239653 111 10381 225017 4.41 235398 112 9950 219407 4.34 229357 113 9822 213645 4.40 223467 114 9621 208283 4.42 217904 115 9354 202402 4.42 211756 116 9436 198079 4.55 207515 117 9032 193055 4.47 202087 118 8841 188068 4.49 196909 119 8717 183308 4.54 192025 120 8514 179353 4.53 187867 121 8300 174741 4.53 183041 122 8163 169072 4.61 177235 123 7945 166237 4.56 174182 124 7761 161540 4.58 169301 125 7660 157104 4.65 164764 126 7313 153059 4.56 160372 127 7194 150654 4.56 157848 128 7079 145406 4.64 152485 129 7021 141631 4.72 148652 130 6719 137401 4.66 144120 131 6434 133646 4.59 140080 132 6271 130386 4.59 136657 133 6188 128068 4.61 134256 134 6082 123270 4.70 129352 135 5950 119944 4.73 125894 136 5770 118025 4.66 123795 137 5720 114803 4.75 120523 138 5587 110918 4.80 116505 139 5268 107927 4.65 113195 140 5025 104396 4.59 109421 141 4829 102839 4.49 107668 142 4657 98854 4.50 103511 143 4552 95975 4.53 100527 144 4363 94061 4.43 98424 145 4188 91819 4.36 96007 146 4183 88863 4.50 93046 147 3962 87632 4.33 91594 148 3926 84890 4.42 88816 149 3950 82623 4.56 86573 150 3753 80863 4.44 84616 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 625924 1332190 31.97 1958114 2 563823 1799758 23.85 2363581 3 430303 1668011 20.51 2098314 4 296547 1733633 14.61 2030180 5 227670 2090565 9.82 2318235 6 186746 2272958 7.59 2459704 7 186972 2634013 6.63 2820985 8 191384 2706738 6.60 2898122 9 169841 2509248 6.34 2679089 10 150147 2420723 5.84 2570870 11 183194 2353860 7.22 2537054 12 162227 2387373 6.36 2549600 13 165155 2407541 6.42 2572696 14 151757 2424775 5.89 2576532 15 175680 2431748 6.74 2607428 16 171851 2388422 6.71 2560273 17 164920 2374029 6.50 2538949 18 152519 2375574 6.03 2528093 19 172102 2383072 6.74 2555174 20 158437 2421449 6.14 2579886 21 168700 2398148 6.57 2566848 22 154382 2417409 6.00 2571791 23 168341 2426155 6.49 2594496 24 150267 2416228 5.85 2566495 25 164342 2432853 6.33 2597195 26 150638 2454877 5.78 2605515 27 161657 2468626 6.15 2630283 28 146386 2510494 5.51 2656880 29 159294 2508530 5.97 2667824 30 146370 2513757 5.50 2660127 31 157973 2497057 5.95 2655030 32 144047 2481815 5.49 2625862 33 152739 2473614 5.82 2626353 34 140814 2475410 5.38 2616224 35 151166 2461051 5.79 2612217 36 136766 2470150 5.25 2606916 37 145567 2476873 5.55 2622440 38 134720 2469510 5.17 2604230 39 143115 2441365 5.54 2584480 40 130637 2435629 5.09 2566266 41 138868 2449194 5.37 2588062 42 127069 2433085 4.96 2560154 43 136570 2421355 5.34 2557925 44 126755 2424693 4.97 2551448 45 132189 2405777 5.21 2537966 46 124297 2401254 4.92 2525551 47 132014 2385046 5.24 2517060 48 120973 2361912 4.87 2482885 49 126140 2356606 5.08 2482746 50 119241 2348529 4.83 2467770 51 124131 2331811 5.05 2455942 52 115648 2306542 4.77 2422190 53 119549 2291446 4.96 2410995 54 113511 2272380 4.76 2385891 55 116851 2246705 4.94 2363556 56 110325 2234596 4.70 2344921 57 112335 2203209 4.85 2315544 58 108316 2193077 4.71 2301393 59 110476 2169716 4.85 2280192 60 102862 2122767 4.62 2225629 61 104242 2091743 4.75 2195985 62 100905 2084829 4.62 2185734 63 100808 2036364 4.72 2137172 64 96308 2010628 4.57 2106936 65 96644 1984327 4.64 2080971 66 93581 1966271 4.54 2059852 67 93625 1949387 4.58 2043012 68 89259 1909402 4.47 1998661 69 89458 1888657 4.52 1978115 70 86284 1857089 4.44 1943373 71 86420 1823783 4.52 1910203 72 82906 1799478 4.40 1882384 73 82358 1775602 4.43 1857960 74 80854 1757841 4.40 1838695 75 79823 1713101 4.45 1792924 76 76531 1678593 4.36 1755124 77 76746 1654097 4.43 1730843 78 74944 1641304 4.37 1716248 79 74400 1605330 4.43 1679730 80 71745 1566838 4.38 1638583 81 70246 1539602 4.36 1609848 82 68669 1518969 4.33 1587638 83 68071 1477290 4.40 1545361 84 65366 1445620 4.33 1510986 85 64345 1413799 4.35 1478144 86 63092 1390989 4.34 1454081 87 62384 1361704 4.38 1424088 88 60681 1340094 4.33 1400775 89 60388 1311071 4.40 1371459 90 58007 1276694 4.35 1334701 91 58154 1250342 4.44 1308496 92 55717 1226605 4.35 1282322 93 54717 1198213 4.37 1252930 94 53882 1176736 4.38 1230618 95 53410 1152644 4.43 1206054 96 51711 1130159 4.38 1181870 97 50811 1104891 4.40 1155702 98 49338 1073815 4.39 1123153 99 48424 1047511 4.42 1095935 100 47460 1028013 4.41 1075473 101 46529 1005785 4.42 1052314 102 45765 986916 4.43 1032681 103 45225 967290 4.47 1012515 104 43485 940536 4.42 984021 105 42722 919626 4.44 962348 106 41652 892359 4.46 934011 107 41007 872378 4.49 913385 108 39681 850845 4.46 890526 109 39248 825587 4.54 864835 110 38233 810825 4.50 849058 111 37751 796539 4.52 834290 112 36242 772379 4.48 808621 113 35739 753158 4.53 788897 114 34661 735464 4.50 770125 115 34517 715357 4.60 749874 116 33094 696005 4.54 729099 117 32716 678678 4.60 711394 118 32044 663633 4.61 695677 119 31024 647643 4.57 678667 120 30498 631024 4.61 661522 121 29908 615768 4.63 645676 122 28891 601030 4.59 629921 123 28622 582336 4.68 610958 124 27228 567637 4.58 594865 125 26619 554078 4.58 580697 126 26231 538505 4.64 564736 127 25577 525472 4.64 551049 128 24786 512411 4.61 537197 129 23993 498023 4.60 522016 130 23535 485522 4.62 509057 131 23175 475393 4.65 498568 132 22698 461527 4.69 484225 133 22152 448609 4.71 470761 134 21555 437115 4.70 458670 135 20777 426394 4.65 447171 136 20165 413729 4.65 433894 137 19862 403279 4.69 423141 138 19225 393294 4.66 412519 139 18568 381165 4.65 399733 140 17933 370561 4.62 388494 141 17363 359940 4.60 377303 142 16790 350690 4.57 367480 143 16490 341694 4.60 358184 144 15886 333845 4.54 349731 145 15527 325565 4.55 341092 146 14741 318415 4.42 333156 147 14424 311883 4.42 326307 148 14073 304439 4.42 318512 149 14204 296551 4.57 310755 150 13566 286511 4.52 300077 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14028 34025 29.19 48053 2 15390 49744 23.63 65134 3 10181 62353 14.04 72534 4 7619 54388 12.29 62007 5 10282 55200 15.70 65482 6 6726 37080 15.35 43806 7 6743 34263 16.44 41006 8 8420 35062 19.36 43482 9 8178 34264 19.27 42442 10 7955 32569 19.63 40524 11 10505 31558 24.97 42063 12 15103 30955 32.79 46058 13 12359 30242 29.01 42601 14 7201 28678 20.07 35879 15 7055 28144 20.04 35199 16 7199 27881 20.52 35080 17 7093 28751 19.79 35844 18 6368 26698 19.26 33066 19 6169 26081 19.13 32250 20 6237 26581 19.00 32818 21 6614 26207 20.15 32821 22 6176 24855 19.90 31031 23 5900 24362 19.50 30262 24 5875 23730 19.84 29605 25 5923 22888 20.56 28811 26 5609 21990 20.32 27599 27 5375 21179 20.24 26554 28 5199 20559 20.18 25758 29 5091 19937 20.34 25028 30 4925 19486 20.18 24411 31 4881 18760 20.65 23641 32 4720 18162 20.63 22882 33 4451 17299 20.46 21750 34 4313 17286 19.97 21599 35 4327 16733 20.55 21060 36 4144 16473 20.10 20617 37 4029 15963 20.15 19992 38 3908 15216 20.44 19124 39 3721 14938 19.94 18659 40 3658 14250 20.43 17908 41 3664 13715 21.08 17379 42 3470 13496 20.45 16966 43 3427 13029 20.83 16456 44 3433 12524 21.51 15957 45 3244 12294 20.88 15538 46 2989 11853 20.14 14842 47 2904 11473 20.20 14377 48 2793 11003 20.24 13796 49 2773 10369 21.10 13142 50 2854 10460 21.44 13314 51 2601 10185 20.34 12786 52 2468 9539 20.55 12007 53 2441 9304 20.78 11745 54 2318 9030 20.43 11348 55 2353 8568 21.55 10921 56 2155 8439 20.34 10594 57 2199 8309 20.93 10508 58 2163 8140 20.99 10303 59 1980 7907 20.03 9887 60 1928 7635 20.16 9563 61 1922 7299 20.84 9221 62 1785 7024 20.26 8809 63 1736 6816 20.30 8552 64 1778 6784 20.77 8562 65 1586 6316 20.07 7902 66 1718 6273 21.50 7991 67 1659 6150 21.24 7809 68 1554 5956 20.69 7510 69 1427 5718 19.97 7145 70 1401 5321 20.84 6722 71 1390 5319 20.72 6709 72 1437 5365 21.13 6802 73 1293 5128 20.14 6421 74 1252 4729 20.93 5981 75 1264 4796 20.86 6060 76 1171 4582 20.35 5753 77 1143 4362 20.76 5505 78 1080 4130 20.73 5210 79 1013 4187 19.48 5200 80 1016 3864 20.82 4880 81 979 3832 20.35 4811 82 986 3760 20.78 4746 83 978 3641 21.17 4619 84 880 3555 19.84 4435 85 936 3393 21.62 4329 86 875 3268 21.12 4143 87 831 3120 21.03 3951 88 810 3234 20.03 4044 89 807 3009 21.15 3816 90 791 2994 20.90 3785 91 757 2786 21.37 3543 92 704 2668 20.88 3372 93 733 2753 21.03 3486 94 628 2554 19.74 3182 95 599 2458 19.59 3057 96 573 2448 18.97 3021 97 565 2262 19.99 2827 98 565 2229 20.22 2794 99 557 2178 20.37 2735 100 518 2159 19.35 2677 101 528 1995 20.93 2523 102 553 1959 22.01 2512 103 474 1861 20.30 2335 104 463 1851 20.01 2314 105 475 1765 21.21 2240 106 417 1723 19.49 2140 107 408 1596 20.36 2004 108 414 1575 20.81 1989 109 412 1523 21.29 1935 110 370 1507 19.71 1877 111 387 1479 20.74 1866 112 357 1390 20.44 1747 113 294 1391 17.45 1685 114 352 1354 20.63 1706 115 335 1356 19.81 1691 116 316 1234 20.39 1550 117 311 1298 19.33 1609 118 292 1226 19.24 1518 119 301 1134 20.98 1435 120 301 1137 20.93 1438 121 256 1049 19.62 1305 122 238 1012 19.04 1250 123 238 1097 17.83 1335 124 283 1048 21.26 1331 125 301 1006 23.03 1307 126 236 932 20.21 1168 127 228 931 19.67 1159 128 246 872 22.00 1118 129 235 842 21.82 1077 130 205 808 20.24 1013 131 197 788 20.00 985 132 159 793 16.70 952 133 178 719 19.84 897 134 176 753 18.95 929 135 180 715 20.11 895 136 199 662 23.11 861 137 163 664 19.71 827 138 162 651 19.93 813 139 192 628 23.41 820 140 141 592 19.24 733 141 152 545 21.81 697 142 132 644 17.01 776 143 138 539 20.38 677 144 148 536 21.64 684 145 136 524 20.61 660 146 159 578 21.57 737 147 152 584 20.65 736 148 131 502 20.70 633 149 111 477 18.88 588 150 102 409 19.96 511 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 23557 167269 12.34 190826 2 16181 56360 22.31 72541 3 15653 69989 18.28 85642 4 8353 61109 12.03 69462 5 5983 84849 6.59 90832 6 3094 91402 3.27 94496 7 2453 61084 3.86 63537 8 2925 60408 4.62 63333 9 2277 59959 3.66 62236 10 4135 55531 6.93 59666 11 9071 52264 14.79 61335 12 2677 52762 4.83 55439 13 2745 52583 4.96 55328 14 1606 53941 2.89 55547 15 2024 47959 4.05 49983 16 2958 46072 6.03 49030 17 1574 48830 3.12 50404 18 1802 51136 3.40 52938 19 1547 44279 3.38 45826 20 1581 44311 3.45 45892 21 1285 42834 2.91 44119 22 1300 43314 2.91 44614 23 1198 41775 2.79 42973 24 1137 39237 2.82 40374 25 1091 38752 2.74 39843 26 1041 37287 2.72 38328 27 1113 36292 2.98 37405 28 1078 36145 2.90 37223 29 952 34818 2.66 35770 30 870 34044 2.49 34914 31 875 32740 2.60 33615 32 881 31742 2.70 32623 33 866 31565 2.67 32431 34 803 30058 2.60 30861 35 787 29302 2.62 30089 36 728 28196 2.52 28924 37 722 28407 2.48 29129 38 718 26489 2.64 27207 39 683 26496 2.51 27179 40 621 25144 2.41 25765 41 633 24218 2.55 24851 42 630 23537 2.61 24167 43 602 23444 2.50 24046 44 590 21840 2.63 22430 45 574 21877 2.56 22451 46 592 20813 2.77 21405 47 518 20053 2.52 20571 48 522 19303 2.63 19825 49 571 19349 2.87 19920 50 513 18404 2.71 18917 51 505 18106 2.71 18611 52 481 17126 2.73 17607 53 460 16996 2.64 17456 54 457 15782 2.81 16239 55 404 15484 2.54 15888 56 402 15104 2.59 15506 57 412 14924 2.69 15336 58 414 14644 2.75 15058 59 414 14246 2.82 14660 60 355 13470 2.57 13825 61 375 13269 2.75 13644 62 407 12472 3.16 12879 63 363 12107 2.91 12470 64 282 11590 2.38 11872 65 315 11452 2.68 11767 66 320 11058 2.81 11378 67 300 11073 2.64 11373 68 295 10454 2.74 10749 69 332 10120 3.18 10452 70 277 9713 2.77 9990 71 274 9382 2.84 9656 72 268 9109 2.86 9377 73 247 8940 2.69 9187 74 253 8682 2.83 8935 75 232 8187 2.76 8419 76 223 8136 2.67 8359 77 250 7588 3.19 7838 78 228 7534 2.94 7762 79 222 7362 2.93 7584 80 219 7129 2.98 7348 81 218 6971 3.03 7189 82 199 6715 2.88 6914 83 185 6242 2.88 6427 84 188 6087 3.00 6275 85 195 6074 3.11 6269 86 214 5838 3.54 6052 87 179 5494 3.16 5673 88 179 5410 3.20 5589 89 162 5434 2.89 5596 90 194 5415 3.46 5609 91 156 4987 3.03 5143 92 168 4737 3.43 4905 93 140 4681 2.90 4821 94 150 4826 3.01 4976 95 129 4289 2.92 4418 96 116 4065 2.77 4181 97 129 4062 3.08 4191 98 123 3720 3.20 3843 99 129 3702 3.37 3831 100 117 3745 3.03 3862 101 103 3567 2.81 3670 102 98 3710 2.57 3808 103 106 3288 3.12 3394 104 89 3222 2.69 3311 105 113 3157 3.46 3270 106 90 2977 2.93 3067 107 89 2863 3.01 2952 108 91 2689 3.27 2780 109 101 2579 3.77 2680 110 81 2638 2.98 2719 111 78 2605 2.91 2683 112 81 2434 3.22 2515 113 71 2316 2.97 2387 114 68 2286 2.89 2354 115 58 2161 2.61 2219 116 67 2241 2.90 2308 117 67 2104 3.09 2171 118 72 1997 3.48 2069 119 65 1828 3.43 1893 120 63 1912 3.19 1975 121 52 1914 2.64 1966 122 59 1724 3.31 1783 123 55 1700 3.13 1755 124 53 1626 3.16 1679 125 56 1644 3.29 1700 126 53 1510 3.39 1563 127 52 1561 3.22 1613 128 44 1502 2.85 1546 129 22 1428 1.52 1450 130 38 1338 2.76 1376 131 60 1278 4.48 1338 132 41 1250 3.18 1291 133 38 1225 3.01 1263 134 34 1149 2.87 1183 135 50 1235 3.89 1285 136 24 1124 2.09 1148 137 42 1127 3.59 1169 138 38 1044 3.51 1082 139 35 975 3.47 1010 140 32 953 3.25 985 141 38 991 3.69 1029 142 29 911 3.09 940 143 26 968 2.62 994 144 30 831 3.48 861 145 26 866 2.91 892 146 31 850 3.52 881 147 31 822 3.63 853 148 23 796 2.81 819 149 24 766 3.04 790 150 24 788 2.96 812 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 60104 161272 27.15 221376 2 54276 215236 20.14 269512 3 39934 187376 17.57 227310 4 30537 176156 14.77 206693 5 28406 210144 11.91 238550 6 22227 225175 8.98 247402 7 17285 260011 6.23 277296 8 21782 251454 7.97 273236 9 12653 232315 5.17 244968 10 11180 217872 4.88 229052 11 15060 198990 7.04 214050 12 13442 194633 6.46 208075 13 11464 194265 5.57 205729 14 9938 191767 4.93 201705 15 12929 189876 6.38 202805 16 15505 175497 8.12 191002 17 10474 175500 5.63 185974 18 9812 169498 5.47 179310 19 10915 167672 6.11 178587 20 9714 164337 5.58 174051 21 9716 156128 5.86 165844 22 8530 155755 5.19 164285 23 9245 152775 5.71 162020 24 7972 149198 5.07 157170 25 8577 146751 5.52 155328 26 7394 144056 4.88 151450 27 8077 139984 5.46 148061 28 7065 139632 4.82 146697 29 7758 134267 5.46 142025 30 6791 131510 4.91 138301 31 7530 126843 5.60 134373 32 6749 122676 5.21 129425 33 7032 119762 5.55 126794 34 6349 116534 5.17 122883 35 6964 112361 5.84 119325 36 5948 109254 5.16 115202 37 6538 106174 5.80 112712 38 5707 104028 5.20 109735 39 6263 100184 5.88 106447 40 5508 97398 5.35 102906 41 5962 95659 5.87 101621 42 5180 91953 5.33 97133 43 5807 89949 6.06 95756 44 4970 87099 5.40 92069 45 5285 84454 5.89 89739 46 4872 81884 5.62 86756 47 5329 79812 6.26 85141 48 4630 76900 5.68 81530 49 4868 74684 6.12 79552 50 4431 72818 5.74 77249 51 4959 69995 6.62 74954 52 4146 67936 5.75 72082 53 4627 65939 6.56 70566 54 4068 64425 5.94 68493 55 4531 61405 6.87 65936 56 3932 61156 6.04 65088 57 4115 58614 6.56 62729 58 3657 57653 5.96 61310 59 4098 55215 6.91 59313 60 3413 53196 6.03 56609 61 3528 50782 6.50 54310 62 3365 50963 6.19 54328 63 3475 47618 6.80 51093 64 3137 46405 6.33 49542 65 3414 44752 7.09 48166 66 2904 43779 6.22 46683 67 3187 42658 6.95 45845 68 2767 40917 6.33 43684 69 2874 40589 6.61 43463 70 2641 38738 6.38 41379 71 2776 36892 7.00 39668 72 2524 36171 6.52 38695 73 2618 35391 6.89 38009 74 2347 35128 6.26 37475 75 2387 33125 6.72 35512 76 2091 31953 6.14 34044 77 2181 31065 6.56 33246 78 2003 30942 6.08 32945 79 2169 29718 6.80 31887 80 1903 28211 6.32 30114 81 1942 27536 6.59 29478 82 1706 26857 5.97 28563 83 1786 25520 6.54 27306 84 1561 24792 5.92 26353 85 1659 24116 6.44 25775 86 1524 23088 6.19 24612 87 1448 22510 6.04 23958 88 1359 22390 5.72 23749 89 1390 21468 6.08 22858 90 1245 20476 5.73 21721 91 1352 19750 6.41 21102 92 1199 19234 5.87 20433 93 1223 18532 6.19 19755 94 1135 18188 5.87 19323 95 1144 17836 6.03 18980 96 1043 17421 5.65 18464 97 1067 16808 5.97 17875 98 1052 15899 6.21 16951 99 969 15269 5.97 16238 100 937 14919 5.91 15856 101 919 14595 5.92 15514 102 794 14221 5.29 15015 103 886 13887 6.00 14773 104 772 13433 5.43 14205 105 783 13100 5.64 13883 106 694 12132 5.41 12826 107 751 11711 6.03 12462 108 645 11488 5.32 12133 109 659 10975 5.66 11634 110 646 10722 5.68 11368 111 619 10720 5.46 11339 112 548 10122 5.14 10670 113 608 9668 5.92 10276 114 533 9492 5.32 10025 115 563 9140 5.80 9703 116 483 8751 5.23 9234 117 471 8420 5.30 8891 118 494 8228 5.66 8722 119 487 7977 5.75 8464 120 425 7707 5.23 8132 121 426 7565 5.33 7991 122 409 7300 5.31 7709 123 414 7108 5.50 7522 124 371 6763 5.20 7134 125 400 6589 5.72 6989 126 298 6341 4.49 6639 127 322 6071 5.04 6393 128 326 5818 5.31 6144 129 335 5796 5.46 6131 130 279 5690 4.67 5969 131 322 5425 5.60 5747 132 266 5292 4.79 5558 133 296 5053 5.53 5349 134 293 4841 5.71 5134 135 276 4675 5.57 4951 136 242 4682 4.91 4924 137 229 4413 4.93 4642 138 226 4510 4.77 4736 139 250 4220 5.59 4470 140 237 3934 5.68 4171 141 228 3984 5.41 4212 142 197 3942 4.76 4139 143 232 3748 5.83 3980 144 180 3659 4.69 3839 145 185 3550 4.95 3735 146 183 3473 5.01 3656 147 205 3343 5.78 3548 148 188 3337 5.33 3525 149 164 3166 4.92 3330 150 154 3119 4.71 3273