CF05-CM05-Zygote_R1_001.fastp-trim.20220827_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 26415892 lines in total Total number of methylation call strings processed: 52831784 Final Cytosine Methylation Report ================================= Total number of C's analysed: 479884653 Total methylated C's in CpG context: 13962325 Total methylated C's in CHG context: 3411355 Total methylated C's in CHH context: 15271311 Total C to T conversions in CpG context: 53211932 Total C to T conversions in CHG context: 96678055 Total C to T conversions in CHH context: 297349675 C methylated in CpG context: 20.8% C methylated in CHG context: 3.4% C methylated in CHH context: 4.9%