CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 141340 359961 28.19 501301 2 148576 528635 21.94 677211 3 119559 691745 14.74 811304 4 111724 539296 17.16 651020 5 109738 656641 14.32 766379 6 85858 486668 15.00 572526 7 87810 438249 16.69 526059 8 102395 476632 17.68 579027 9 108235 481195 18.36 589430 10 110735 466188 19.19 576923 11 123808 482007 20.44 605815 12 141344 487193 22.49 628537 13 133817 487450 21.54 621267 14 128117 489998 20.73 618115 15 129513 489036 20.94 618549 16 129616 489499 20.94 619115 17 134525 498432 21.25 632957 18 129583 499557 20.60 629140 19 126496 482234 20.78 608730 20 131362 493203 21.03 624565 21 135109 501711 21.22 636820 22 134392 497556 21.27 631948 23 134432 500580 21.17 635012 24 134327 507537 20.93 641864 25 137538 504284 21.43 641822 26 136798 497094 21.58 633892 27 135925 502176 21.30 638101 28 134541 495749 21.35 630290 29 135084 496321 21.39 631405 30 134669 499513 21.24 634182 31 135091 499797 21.28 634888 32 134200 495111 21.32 629311 33 134684 497811 21.29 632495 34 134865 494701 21.42 629566 35 136603 495445 21.61 632048 36 135268 504178 21.15 639446 37 134236 491740 21.44 625976 38 136003 495417 21.54 631420 39 134090 497939 21.22 632029 40 133615 487224 21.52 620839 41 134845 486216 21.71 621061 42 134513 489265 21.56 623778 43 134138 483083 21.73 617221 44 135887 487372 21.80 623259 45 132453 482844 21.53 615297 46 131930 479262 21.59 611192 47 131559 475823 21.66 607382 48 132542 479756 21.65 612298 49 130644 472763 21.65 603407 50 131348 472834 21.74 604182 51 128638 471267 21.44 599905 52 126488 464997 21.38 591485 53 126257 459852 21.54 586109 54 124701 458289 21.39 582990 55 124203 454167 21.47 578370 56 124423 452803 21.56 577226 57 124328 453076 21.53 577404 58 122090 448171 21.41 570261 59 121188 443446 21.46 564634 60 119299 442848 21.22 562147 61 117845 431385 21.46 549230 62 117377 429102 21.48 546479 63 115416 424651 21.37 540067 64 114890 422486 21.38 537376 65 114844 418107 21.55 532951 66 113319 416171 21.40 529490 67 113035 410547 21.59 523582 68 109320 406009 21.21 515329 69 107767 401162 21.18 508929 70 106369 394671 21.23 501040 71 105596 387824 21.40 493420 72 103030 383064 21.20 486094 73 101457 374975 21.30 476432 74 101605 371607 21.47 473212 75 98508 367117 21.16 465625 76 97664 360571 21.31 458235 77 96908 354686 21.46 451594 78 94339 348817 21.29 443156 79 92714 344050 21.23 436764 80 91970 338663 21.36 430633 81 90411 335753 21.22 426164 82 88907 329635 21.24 418542 83 88121 323771 21.39 411892 84 85514 321828 20.99 407342 85 83808 313795 21.08 397603 86 82430 310365 20.99 392795 87 81431 303819 21.14 385250 88 80709 300796 21.16 381505 89 78458 294866 21.02 373324 90 77685 291453 21.04 369138 91 76159 284357 21.12 360516 92 74282 277418 21.12 351700 93 73430 274151 21.13 347581 94 70935 264913 21.12 335848 95 69406 260686 21.03 330092 96 67215 256631 20.76 323846 97 65997 251036 20.82 317033 98 64693 245264 20.87 309957 99 63795 240599 20.96 304394 100 61938 235684 20.81 297622 101 61122 231088 20.92 292210 102 59923 228222 20.80 288145 103 58090 222598 20.70 280688 104 57135 217302 20.82 274437 105 56341 214388 20.81 270729 106 55044 209616 20.80 264660 107 52675 204538 20.48 257213 108 51962 202340 20.43 254302 109 51306 197523 20.62 248829 110 50166 193875 20.56 244041 111 48883 190085 20.46 238968 112 47586 185303 20.43 232889 113 47030 181967 20.54 228997 114 46343 178265 20.63 224608 115 45129 173804 20.61 218933 116 43797 172047 20.29 215844 117 42513 168375 20.16 210888 118 41636 162979 20.35 204615 119 41306 161184 20.40 202490 120 40037 157128 20.31 197165 121 39185 153267 20.36 192452 122 38750 150648 20.46 189398 123 37982 146372 20.60 184354 124 37823 143096 20.91 180919 125 37269 140906 20.92 178175 126 35232 137723 20.37 172955 127 33759 133682 20.16 167441 128 33174 131214 20.18 164388 129 32009 127194 20.11 159203 130 31381 124411 20.14 155792 131 30521 122637 19.93 153158 132 30040 119132 20.14 149172 133 29186 115795 20.13 144981 134 28648 114274 20.04 142922 135 28345 111736 20.23 140081 136 27984 109285 20.39 137269 137 27300 107158 20.30 134458 138 26732 105454 20.22 132186 139 26193 103271 20.23 129464 140 25295 100855 20.05 126150 141 23895 96925 19.78 120820 142 23506 94606 19.90 118112 143 22789 92628 19.74 115417 144 22181 91517 19.51 113698 145 22321 88583 20.13 110904 146 21666 88913 19.59 110579 147 21332 88074 19.50 109406 148 20694 84558 19.66 105252 149 19779 82336 19.37 102115 150 19077 79757 19.30 98834 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 210698 1682556 11.13 1893254 2 121046 646111 15.78 767157 3 93777 895515 9.48 989292 4 82138 771489 9.62 853627 5 37659 1034453 3.51 1072112 6 33373 1222723 2.66 1256096 7 26968 851138 3.07 878106 8 27740 842383 3.19 870123 9 27154 868574 3.03 895728 10 29693 844427 3.40 874120 11 40264 849580 4.52 889844 12 27385 886844 3.00 914229 13 26872 901486 2.89 928358 14 24796 884969 2.73 909765 15 25702 874315 2.86 900017 16 26731 873610 2.97 900341 17 24593 898759 2.66 923352 18 24595 910296 2.63 934891 19 23808 876615 2.64 900423 20 23907 881673 2.64 905580 21 23956 892100 2.62 916056 22 24090 900880 2.60 924970 23 23809 901043 2.57 924852 24 23425 891225 2.56 914650 25 23845 903378 2.57 927223 26 23184 885233 2.55 908417 27 23276 885173 2.56 908449 28 23527 896469 2.56 919996 29 23504 892366 2.57 915870 30 23405 893704 2.55 917109 31 23669 893847 2.58 917516 32 23135 886784 2.54 909919 33 24076 903449 2.60 927525 34 23396 894825 2.55 918221 35 23315 892313 2.55 915628 36 23203 887328 2.55 910531 37 23982 904819 2.58 928801 38 23562 888931 2.58 912493 39 24155 897413 2.62 921568 40 23861 888220 2.62 912081 41 23540 892927 2.57 916467 42 23953 885755 2.63 909708 43 23901 890463 2.61 914364 44 23342 874427 2.60 897769 45 24044 881183 2.66 905227 46 23973 870888 2.68 894861 47 23776 859669 2.69 883445 48 23642 859750 2.68 883392 49 23966 868523 2.69 892489 50 23831 853820 2.72 877651 51 24168 851798 2.76 875966 52 23808 849515 2.73 873323 53 23940 846692 2.75 870632 54 23463 830669 2.75 854132 55 23801 836014 2.77 859815 56 23130 822735 2.73 845865 57 23963 824938 2.82 848901 58 23553 811881 2.82 835434 59 23521 802181 2.85 825702 60 23396 797880 2.85 821276 61 23886 802773 2.89 826659 62 23423 782966 2.90 806389 63 23275 775696 2.91 798971 64 23006 770194 2.90 793200 65 23385 764057 2.97 787442 66 22856 755998 2.93 778854 67 23119 754132 2.97 777251 68 22761 737306 2.99 760067 69 22620 732159 3.00 754779 70 22346 724493 2.99 746839 71 22357 710049 3.05 732406 72 21787 699330 3.02 721117 73 22125 696445 3.08 718570 74 21575 681646 3.07 703221 75 21411 674931 3.07 696342 76 21179 663794 3.09 684973 77 21225 650856 3.16 672081 78 20584 642680 3.10 663264 79 20675 633982 3.16 654657 80 20339 620817 3.17 641156 81 20228 614780 3.19 635008 82 19782 602601 3.18 622383 83 19597 588271 3.22 607868 84 19262 579170 3.22 598432 85 19364 576098 3.25 595462 86 18848 562589 3.24 581437 87 18748 554628 3.27 573376 88 18111 545330 3.21 563441 89 18323 535436 3.31 553759 90 18016 527338 3.30 545354 91 17779 518561 3.31 536340 92 17322 505764 3.31 523086 93 17054 502391 3.28 519445 94 16972 498088 3.30 515060 95 16650 475321 3.38 491971 96 16123 464906 3.35 481029 97 16045 460100 3.37 476145 98 15666 446592 3.39 462258 99 15421 439530 3.39 454951 100 15076 432851 3.37 447927 101 15112 426776 3.42 441888 102 14915 422982 3.41 437897 103 14394 405803 3.43 420197 104 14087 392446 3.47 406533 105 13637 385638 3.42 399275 106 13291 376658 3.41 389949 107 13344 367898 3.50 381242 108 12901 360442 3.46 373343 109 12631 355547 3.43 368178 110 12499 346359 3.48 358858 111 12313 341466 3.48 353779 112 11904 333396 3.45 345300 113 11710 324381 3.48 336091 114 11628 317825 3.53 329453 115 11368 311015 3.53 322383 116 10919 304143 3.47 315062 117 10903 299426 3.51 310329 118 10482 291736 3.47 302218 119 10484 284234 3.56 294718 120 10408 280297 3.58 290705 121 10150 273549 3.58 283699 122 9779 266680 3.54 276459 123 9686 261962 3.57 271648 124 9577 254569 3.63 264146 125 9331 250579 3.59 259910 126 9125 244491 3.60 253616 127 8932 240273 3.58 249205 128 8897 234685 3.65 243582 129 8628 230253 3.61 238881 130 8306 222920 3.59 231226 131 8270 217672 3.66 225942 132 7982 213519 3.60 221501 133 7936 209764 3.65 217700 134 7644 203815 3.61 211459 135 7586 199167 3.67 206753 136 7689 195661 3.78 203350 137 7274 190420 3.68 197694 138 7105 186064 3.68 193169 139 6876 181042 3.66 187918 140 6616 176743 3.61 183359 141 6540 173110 3.64 179650 142 6380 169422 3.63 175802 143 6012 163307 3.55 169319 144 5982 160726 3.59 166708 145 5822 158439 3.54 164261 146 5612 154786 3.50 160398 147 5589 152254 3.54 157843 148 5695 148211 3.70 153906 149 5833 145973 3.84 151806 150 5719 142482 3.86 148201 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 590119 1754441 25.17 2344560 2 490008 2197561 18.23 2687569 3 398792 2093112 16.00 2491904 4 368578 1991195 15.62 2359773 5 216260 2404715 8.25 2620975 6 179172 2662499 6.31 2841671 7 180200 3009591 5.65 3189791 8 175225 2994374 5.53 3169599 9 161032 2826559 5.39 2987591 10 147754 2775074 5.06 2922828 11 162369 2715776 5.64 2878145 12 146078 2712161 5.11 2858239 13 150863 2757111 5.19 2907974 14 139879 2736995 4.86 2876874 15 151218 2701357 5.30 2852575 16 147773 2665020 5.25 2812793 17 144756 2648693 5.18 2793449 18 135241 2670454 4.82 2805695 19 147283 2682053 5.21 2829336 20 138463 2705717 4.87 2844180 21 141885 2649278 5.08 2791163 22 133998 2668124 4.78 2802122 23 143215 2678807 5.07 2822022 24 130925 2663174 4.69 2794099 25 140839 2687012 4.98 2827851 26 131531 2698629 4.65 2830160 27 137274 2700629 4.84 2837903 28 129677 2747960 4.51 2877637 29 137031 2756104 4.74 2893135 30 128012 2755073 4.44 2883085 31 135702 2757894 4.69 2893596 32 127358 2734305 4.45 2861663 33 131244 2743126 4.57 2874370 34 123289 2746333 4.30 2869622 35 129604 2737087 4.52 2866691 36 120513 2747116 4.20 2867629 37 127377 2754199 4.42 2881576 38 120902 2756738 4.20 2877640 39 124861 2740867 4.36 2865728 40 117627 2742796 4.11 2860423 41 123144 2787161 4.23 2910305 42 114096 2750413 3.98 2864509 43 121538 2743371 4.24 2864909 44 116235 2747722 4.06 2863957 45 119288 2750041 4.16 2869329 46 114554 2740563 4.01 2855117 47 118908 2734476 4.17 2853384 48 111278 2707288 3.95 2818566 49 116073 2708776 4.11 2824849 50 111581 2711798 3.95 2823379 51 115161 2692662 4.10 2807823 52 109640 2667551 3.95 2777191 53 112510 2659501 4.06 2772011 54 107043 2632347 3.91 2739390 55 110376 2609042 4.06 2719418 56 107335 2604353 3.96 2711688 57 107657 2577130 4.01 2684787 58 104972 2581870 3.91 2686842 59 107550 2561742 4.03 2669292 60 100510 2503519 3.86 2604029 61 101567 2482003 3.93 2583570 62 100319 2484783 3.88 2585102 63 99837 2420993 3.96 2520830 64 97512 2394952 3.91 2492464 65 98062 2370565 3.97 2468627 66 94371 2350633 3.86 2445004 67 96690 2350161 3.95 2446851 68 92604 2301123 3.87 2393727 69 92990 2295231 3.89 2388221 70 91115 2257344 3.88 2348459 71 91502 2217455 3.96 2308957 72 88145 2188483 3.87 2276628 73 88337 2169642 3.91 2257979 74 86987 2160103 3.87 2247090 75 85602 2104562 3.91 2190164 76 82902 2070209 3.85 2153111 77 83740 2052988 3.92 2136728 78 82618 2045653 3.88 2128271 79 81657 2008163 3.91 2089820 80 79006 1955908 3.88 2034914 81 78243 1931039 3.89 2009282 82 77317 1909545 3.89 1986862 83 76441 1858270 3.95 1934711 84 73954 1820826 3.90 1894780 85 73076 1789507 3.92 1862583 86 71344 1769062 3.88 1840406 87 71350 1736003 3.95 1807353 88 69981 1721542 3.91 1791523 89 70211 1690502 3.99 1760713 90 67232 1641967 3.93 1709199 91 67101 1617529 3.98 1684630 92 65307 1591652 3.94 1656959 93 64477 1560478 3.97 1624955 94 62996 1536585 3.94 1599581 95 63234 1513591 4.01 1576825 96 61781 1498091 3.96 1559872 97 60615 1467536 3.97 1528151 98 59611 1423395 4.02 1483006 99 58791 1393038 4.05 1451829 100 56938 1368595 3.99 1425533 101 56418 1343981 4.03 1400399 102 54370 1324942 3.94 1379312 103 55294 1306250 4.06 1361544 104 53322 1272688 4.02 1326010 105 52653 1256574 4.02 1309227 106 50843 1217284 4.01 1268127 107 50828 1192630 4.09 1243458 108 49101 1172732 4.02 1221833 109 48565 1143478 4.07 1192043 110 47557 1123306 4.06 1170863 111 47206 1109030 4.08 1156236 112 45685 1076695 4.07 1122380 113 45243 1051322 4.13 1096565 114 43554 1033945 4.04 1077499 115 43492 1008907 4.13 1052399 116 42563 986448 4.14 1029011 117 41326 964135 4.11 1005461 118 40672 941809 4.14 982481 119 40140 922318 4.17 962458 120 39067 900618 4.16 939685 121 38341 878966 4.18 917307 122 37774 859931 4.21 897705 123 36887 839762 4.21 876649 124 35906 822714 4.18 858620 125 35334 806191 4.20 841525 126 34060 788219 4.14 822279 127 33461 770683 4.16 804144 128 32653 751434 4.16 784087 129 32186 737246 4.18 769432 130 31567 720988 4.19 752555 131 31078 708380 4.20 739458 132 30230 687142 4.21 717372 133 29504 673214 4.20 702718 134 29319 658181 4.26 687500 135 28316 641392 4.23 669708 136 27463 629624 4.18 657087 137 27282 617758 4.23 645040 138 26235 602960 4.17 629195 139 26054 588605 4.24 614659 140 25077 573402 4.19 598479 141 24547 558487 4.21 583034 142 23981 546775 4.20 570756 143 23433 534231 4.20 557664 144 22749 524240 4.16 546989 145 22751 515081 4.23 537832 146 21728 505444 4.12 527172 147 20994 495814 4.06 516808 148 21607 485051 4.26 506658 149 22061 475599 4.43 497660 150 21420 463899 4.41 485319 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 19677 59483 24.86 79160 2 19913 85720 18.85 105633 3 15160 110529 12.06 125689 4 15637 81420 16.11 97057 5 14617 98965 12.87 113582 6 11409 68962 14.20 80371 7 11064 61541 15.24 72605 8 12885 63791 16.80 76676 9 12872 62121 17.16 74993 10 12774 58740 17.86 71514 11 14629 58832 19.91 73461 12 18392 58490 23.92 76882 13 15617 57181 21.45 72798 14 13465 56028 19.38 69493 15 13169 54333 19.51 67502 16 13244 53415 19.87 66659 17 14508 55800 20.63 70308 18 12176 51122 19.24 63298 19 11937 48697 19.69 60634 20 11870 48400 19.69 60270 21 12258 48498 20.18 60756 22 11779 46260 20.29 58039 23 11127 45394 19.69 56521 24 11178 44854 19.95 56032 25 11587 43881 20.89 55468 26 10551 41953 20.10 52504 27 10288 42247 19.58 52535 28 10234 40237 20.28 50471 29 10037 39372 20.31 49409 30 9826 38494 20.34 48320 31 9544 37837 20.14 47381 32 9366 36528 20.41 45894 33 9086 35635 20.32 44721 34 8925 34340 20.63 43265 35 8822 34019 20.59 42841 36 8475 33873 20.01 42348 37 8337 32571 20.38 40908 38 8237 31228 20.87 39465 39 7912 30999 20.33 38911 40 7577 29471 20.45 37048 41 7566 28717 20.85 36283 42 7448 28256 20.86 35704 43 7322 27415 21.08 34737 44 7118 27011 20.86 34129 45 6870 26185 20.78 33055 46 6637 25209 20.84 31846 47 6539 24695 20.94 31234 48 6325 24273 20.67 30598 49 6254 23650 20.91 29904 50 6129 23310 20.82 29439 51 5868 22606 20.61 28474 52 5598 21387 20.74 26985 53 5588 20955 21.05 26543 54 5337 20585 20.59 25922 55 5264 20144 20.72 25408 56 5225 19379 21.24 24604 57 5216 19566 21.05 24782 58 4835 18734 20.51 23569 59 4812 18377 20.75 23189 60 4496 18034 19.96 22530 61 4580 16876 21.35 21456 62 4310 16720 20.49 21030 63 4272 16208 20.86 20480 64 4191 16080 20.67 20271 65 4195 15521 21.28 19716 66 4039 15066 21.14 19105 67 4098 15109 21.34 19207 68 3842 14458 20.99 18300 69 3672 13967 20.82 17639 70 3550 13750 20.52 17300 71 3514 13108 21.14 16622 72 3423 12900 20.97 16323 73 3242 12506 20.59 15748 74 3414 12184 21.89 15598 75 3161 12009 20.84 15170 76 3203 11454 21.85 14657 77 3035 11107 21.46 14142 78 3004 11000 21.45 14004 79 2867 10700 21.13 13567 80 2927 10547 21.72 13474 81 2712 10272 20.89 12984 82 2718 10247 20.96 12965 83 2727 9697 21.95 12424 84 2674 9669 21.66 12343 85 2464 9307 20.93 11771 86 2355 8944 20.84 11299 87 2335 8846 20.88 11181 88 2323 8635 21.20 10958 89 2357 8469 21.77 10826 90 2299 8321 21.65 10620 91 2176 7977 21.43 10153 92 2126 7763 21.50 9889 93 2154 7670 21.93 9824 94 1981 7296 21.35 9277 95 1908 7042 21.32 8950 96 1872 6969 21.17 8841 97 1803 6713 21.17 8516 98 1709 6457 20.93 8166 99 1766 6282 21.94 8048 100 1702 6135 21.72 7837 101 1591 6076 20.75 7667 102 1554 5778 21.19 7332 103 1587 5759 21.60 7346 104 1572 5510 22.20 7082 105 1453 5406 21.18 6859 106 1488 5339 21.80 6827 107 1409 5151 21.48 6560 108 1337 5157 20.59 6494 109 1327 4919 21.25 6246 110 1281 4780 21.14 6061 111 1269 4695 21.28 5964 112 1219 4552 21.12 5771 113 1217 4494 21.31 5711 114 1225 4370 21.89 5595 115 1169 4189 21.82 5358 116 1144 4164 21.55 5308 117 1054 4091 20.49 5145 118 1034 3919 20.88 4953 119 1012 3872 20.72 4884 120 965 3775 20.36 4740 121 977 3683 20.97 4660 122 961 3373 22.17 4334 123 920 3446 21.07 4366 124 941 3439 21.48 4380 125 1030 3396 23.27 4426 126 886 3249 21.43 4135 127 819 3148 20.65 3967 128 813 3028 21.17 3841 129 745 3006 19.86 3751 130 644 2793 18.74 3437 131 710 2747 20.54 3457 132 754 2778 21.35 3532 133 721 2606 21.67 3327 134 653 2597 20.09 3250 135 703 2556 21.57 3259 136 671 2410 21.78 3081 137 650 2430 21.10 3080 138 659 2354 21.87 3013 139 681 2442 21.81 3123 140 639 2185 22.63 2824 141 577 2046 22.00 2623 142 553 2096 20.88 2649 143 541 2033 21.02 2574 144 453 2049 18.11 2502 145 516 1948 20.94 2464 146 491 1986 19.82 2477 147 565 2052 21.59 2617 148 504 1887 21.08 2391 149 441 1750 20.13 2191 150 428 1737 19.77 2165 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 32138 289748 9.98 321886 2 16932 106832 13.68 123764 3 13801 123919 10.02 137720 4 12670 112907 10.09 125577 5 5808 148543 3.76 154351 6 5011 175880 2.77 180891 7 4091 115849 3.41 119940 8 4178 110067 3.66 114245 9 3802 111693 3.29 115495 10 4676 104041 4.30 108717 11 7743 101073 7.12 108816 12 3770 102852 3.54 106622 13 3613 101318 3.44 104931 14 3075 97149 3.07 100224 15 3214 95078 3.27 98292 16 3620 92038 3.78 95658 17 2827 93092 2.95 95919 18 2866 96196 2.89 99062 19 2588 85446 2.94 88034 20 2650 85147 3.02 87797 21 2488 83329 2.90 85817 22 2395 81607 2.85 84002 23 2347 80349 2.84 82696 24 2278 76229 2.90 78507 25 2152 77184 2.71 79336 26 2096 74535 2.74 76631 27 2035 72110 2.74 74145 28 1981 72058 2.68 74039 29 2003 69833 2.79 71836 30 1896 68379 2.70 70275 31 1735 66304 2.55 68039 32 1774 63609 2.71 65383 33 1707 64324 2.59 66031 34 1634 62819 2.54 64453 35 1608 60749 2.58 62357 36 1612 58748 2.67 60360 37 1548 58693 2.57 60241 38 1501 56240 2.60 57741 39 1421 56213 2.47 57634 40 1453 52730 2.68 54183 41 1420 52151 2.65 53571 42 1332 51015 2.54 52347 43 1354 49832 2.65 51186 44 1271 47259 2.62 48530 45 1328 47517 2.72 48845 46 1229 45606 2.62 46835 47 1111 43733 2.48 44844 48 1205 43263 2.71 44468 49 1217 42794 2.77 44011 50 1108 41260 2.62 42368 51 1143 40562 2.74 41705 52 1114 39199 2.76 40313 53 1063 38438 2.69 39501 54 1002 36721 2.66 37723 55 1024 36494 2.73 37518 56 991 35190 2.74 36181 57 1051 34894 2.92 35945 58 983 33205 2.88 34188 59 926 32413 2.78 33339 60 896 31938 2.73 32834 61 847 31661 2.61 32508 62 839 30071 2.71 30910 63 806 29166 2.69 29972 64 800 28560 2.72 29360 65 824 28559 2.80 29383 66 758 27388 2.69 28146 67 796 27595 2.80 28391 68 707 26377 2.61 27084 69 750 25791 2.83 26541 70 765 24868 2.98 25633 71 718 24365 2.86 25083 72 643 23498 2.66 24141 73 703 23513 2.90 24216 74 622 22205 2.72 22827 75 640 21988 2.83 22628 76 582 21251 2.67 21833 77 637 20885 2.96 21522 78 570 20289 2.73 20859 79 572 19643 2.83 20215 80 540 19136 2.74 19676 81 489 18610 2.56 19099 82 510 17977 2.76 18487 83 481 17573 2.66 18054 84 502 16866 2.89 17368 85 475 16731 2.76 17206 86 510 16466 3.00 16976 87 477 15950 2.90 16427 88 476 15931 2.90 16407 89 450 15286 2.86 15736 90 430 14830 2.82 15260 91 444 14597 2.95 15041 92 423 14119 2.91 14542 93 427 14218 2.92 14645 94 408 14477 2.74 14885 95 351 13166 2.60 13517 96 399 12422 3.11 12821 97 351 12269 2.78 12620 98 342 11889 2.80 12231 99 353 11439 2.99 11792 100 369 11615 3.08 11984 101 366 11400 3.11 11766 102 335 11492 2.83 11827 103 321 10407 2.99 10728 104 271 9953 2.65 10224 105 292 9965 2.85 10257 106 315 9463 3.22 9778 107 282 9140 2.99 9422 108 271 9011 2.92 9282 109 267 8836 2.93 9103 110 252 8540 2.87 8792 111 259 8410 2.99 8669 112 237 8226 2.80 8463 113 245 8003 2.97 8248 114 212 7896 2.61 8108 115 212 7502 2.75 7714 116 235 7173 3.17 7408 117 220 7098 3.01 7318 118 221 6816 3.14 7037 119 210 6716 3.03 6926 120 203 6666 2.96 6869 121 197 6429 2.97 6626 122 190 6452 2.86 6642 123 200 6115 3.17 6315 124 160 6091 2.56 6251 125 157 5932 2.58 6089 126 168 5705 2.86 5873 127 167 5774 2.81 5941 128 161 5536 2.83 5697 129 145 5397 2.62 5542 130 153 5251 2.83 5404 131 147 4934 2.89 5081 132 148 4827 2.97 4975 133 142 5011 2.76 5153 134 126 4645 2.64 4771 135 120 4600 2.54 4720 136 146 4412 3.20 4558 137 129 4401 2.85 4530 138 121 4191 2.81 4312 139 103 4165 2.41 4268 140 110 4087 2.62 4197 141 92 3853 2.33 3945 142 114 3881 2.85 3995 143 99 3695 2.61 3794 144 114 3615 3.06 3729 145 87 3535 2.40 3622 146 94 3533 2.59 3627 147 116 3397 3.30 3513 148 109 3388 3.12 3497 149 114 3253 3.39 3367 150 100 3224 3.01 3324 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 75179 282225 21.03 357404 2 64873 363040 15.16 427913 3 52917 323051 14.07 375968 4 48768 296092 14.14 344860 5 29495 355644 7.66 385139 6 25998 386187 6.31 412185 7 23344 438489 5.05 461833 8 25635 424226 5.70 449861 9 19236 387462 4.73 406698 10 17709 374368 4.52 392077 11 20106 351490 5.41 371596 12 17915 344361 4.95 362276 13 16799 350440 4.57 367239 14 15691 340808 4.40 356499 15 17071 328727 4.94 345798 16 18708 308790 5.71 327498 17 15234 305657 4.75 320891 18 14108 301147 4.48 315255 19 14681 298462 4.69 313143 20 13849 291552 4.53 305401 21 13672 273679 4.76 287351 22 12436 271781 4.38 284217 23 12708 266252 4.56 278960 24 11278 259403 4.17 270681 25 12127 257421 4.50 269548 26 10965 250785 4.19 261750 27 11191 245765 4.36 256956 28 10183 245398 3.98 255581 29 10849 239838 4.33 250687 30 9864 234214 4.04 244078 31 10214 229711 4.26 239925 32 9540 220566 4.15 230106 33 9728 217220 4.29 226948 34 8744 211262 3.97 220006 35 9428 205135 4.39 214563 36 8219 200391 3.94 208610 37 8979 197221 4.35 206200 38 8334 192541 4.15 200875 39 8430 188499 4.28 196929 40 7610 184000 3.97 191610 41 8310 183111 4.34 191421 42 7249 175557 3.97 182806 43 7751 171755 4.32 179506 44 7288 168472 4.15 175760 45 7431 165559 4.30 172990 46 6973 160539 4.16 167512 47 7321 157229 4.45 164550 48 6474 152359 4.08 158833 49 6776 149424 4.34 156200 50 6389 146724 4.17 153113 51 6666 142340 4.47 149006 52 6055 138176 4.20 144231 53 6293 135806 4.43 142099 54 5763 131742 4.19 137505 55 6053 128055 4.51 134108 56 5819 126087 4.41 131906 57 5729 121971 4.49 127700 58 5394 121198 4.26 126592 59 5718 119265 4.58 124983 60 5068 113251 4.28 118319 61 5134 110060 4.46 115194 62 5036 110355 4.36 115391 63 5026 103733 4.62 108759 64 4778 101409 4.50 106187 65 4792 98340 4.65 103132 66 4372 96853 4.32 101225 67 4753 97286 4.66 102039 68 4414 92780 4.54 97194 69 4375 92637 4.51 97012 70 4189 88744 4.51 92933 71 4205 85718 4.68 89923 72 4061 84986 4.56 89047 73 4051 82302 4.69 86353 74 3833 82761 4.43 86594 75 3867 77986 4.72 81853 76 3668 76058 4.60 79726 77 3800 75398 4.80 79198 78 3437 75499 4.35 78936 79 3458 72922 4.53 76380 80 3360 69643 4.60 73003 81 3182 68196 4.46 71378 82 3218 67697 4.54 70915 83 3165 63685 4.73 66850 84 2822 62190 4.34 65012 85 2867 60171 4.55 63038 86 2790 58864 4.53 61654 87 2723 57687 4.51 60410 88 2671 58003 4.40 60674 89 2750 55889 4.69 58639 90 2494 53824 4.43 56318 91 2602 52392 4.73 54994 92 2391 51369 4.45 53760 93 2329 49736 4.47 52065 94 2387 49346 4.61 51733 95 2375 48492 4.67 50867 96 2205 47970 4.39 50175 97 2146 47035 4.36 49181 98 2099 43999 4.55 46098 99 2094 43194 4.62 45288 100 1911 42025 4.35 43936 101 2066 41047 4.79 43113 102 1807 40393 4.28 42200 103 1840 40052 4.39 41892 104 1748 38555 4.34 40303 105 1681 37887 4.25 39568 106 1672 36328 4.40 38000 107 1681 35160 4.56 36841 108 1587 34945 4.34 36532 109 1503 33137 4.34 34640 110 1480 32853 4.31 34333 111 1451 32434 4.28 33885 112 1406 31271 4.30 32677 113 1458 30124 4.62 31582 114 1266 29498 4.12 30764 115 1346 28743 4.47 30089 116 1296 27726 4.47 29022 117 1192 26892 4.24 28084 118 1158 26304 4.22 27462 119 1251 25667 4.65 26918 120 1052 24764 4.07 25816 121 1130 24305 4.44 25435 122 1060 23416 4.33 24476 123 1012 22856 4.24 23868 124 1015 22030 4.40 23045 125 1012 21807 4.43 22819 126 935 21394 4.19 22329 127 975 20687 4.50 21662 128 894 20102 4.26 20996 129 902 19926 4.33 20828 130 812 19433 4.01 20245 131 849 18946 4.29 19795 132 743 18452 3.87 19195 133 802 17567 4.37 18369 134 761 17451 4.18 18212 135 706 17030 3.98 17736 136 705 16713 4.05 17418 137 653 16459 3.82 17112 138 634 15950 3.82 16584 139 689 15496 4.26 16185 140 581 14794 3.78 15375 141 563 14384 3.77 14947 142 632 14012 4.32 14644 143 569 13760 3.97 14329 144 534 13427 3.82 13961 145 554 13098 4.06 13652 146 533 12977 3.95 13510 147 563 12771 4.22 13334 148 549 12515 4.20 13064 149 519 12071 4.12 12590 150 483 11665 3.98 12148