CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 208206 756229 21.59 964435 2 219786 1150084 16.04 1369870 3 184013 1495471 10.96 1679484 4 202002 1113692 15.35 1315694 5 168765 1392375 10.81 1561140 6 130232 982698 11.70 1112930 7 127466 876806 12.69 1004272 8 144901 949638 13.24 1094539 9 152781 955078 13.79 1107859 10 165113 913729 15.30 1078842 11 187403 965228 16.26 1152631 12 220084 969018 18.51 1189102 13 220995 965535 18.63 1186530 14 200060 973314 17.05 1173374 15 201646 959388 17.37 1161034 16 203458 965994 17.40 1169452 17 210687 975535 17.76 1186222 18 202774 986727 17.05 1189501 19 198467 935936 17.50 1134403 20 204604 957316 17.61 1161920 21 207560 977440 17.52 1185000 22 206976 972505 17.55 1179481 23 207621 967276 17.67 1174897 24 210622 983655 17.64 1194277 25 211839 981115 17.76 1192954 26 214598 969166 18.13 1183764 27 213588 982110 17.86 1195698 28 211352 965129 17.96 1176481 29 211706 960578 18.06 1172284 30 211313 973018 17.84 1184331 31 211208 973398 17.83 1184606 32 211279 965916 17.95 1177195 33 210405 969193 17.84 1179598 34 211741 963742 18.01 1175483 35 213250 965031 18.10 1178281 36 213098 1000522 17.56 1213620 37 210560 955697 18.05 1166257 38 214608 972988 18.07 1187596 39 211878 977400 17.82 1189278 40 209445 948665 18.09 1158110 41 214718 951338 18.41 1166056 42 212581 962168 18.10 1174749 43 211320 946818 18.25 1158138 44 215453 957678 18.37 1173131 45 211074 950797 18.17 1161871 46 208343 938640 18.16 1146983 47 208304 937020 18.19 1145324 48 209468 948300 18.09 1157768 49 208710 938661 18.19 1147371 50 209278 944832 18.13 1154110 51 204705 936667 17.93 1141372 52 201246 927871 17.82 1129117 53 201579 911544 18.11 1113123 54 199795 913030 17.95 1112825 55 199307 908888 17.98 1108195 56 199265 903909 18.06 1103174 57 199995 915301 17.93 1115296 58 195721 896702 17.92 1092423 59 195717 894173 17.96 1089890 60 193095 895307 17.74 1088402 61 190562 870200 17.96 1060762 62 188848 862558 17.96 1051406 63 187299 859151 17.90 1046450 64 185473 855847 17.81 1041320 65 185740 847878 17.97 1033618 66 183584 853284 17.71 1036868 67 184339 837642 18.04 1021981 68 178428 834355 17.62 1012783 69 177872 831858 17.62 1009730 70 174360 815250 17.62 989610 71 173819 795892 17.92 969711 72 170104 792897 17.66 963001 73 168574 777906 17.81 946480 74 167304 767406 17.90 934710 75 164356 762678 17.73 927034 76 161939 750472 17.75 912411 77 161728 743713 17.86 905441 78 157878 736003 17.66 893881 79 154896 724521 17.61 879417 80 155425 721019 17.73 876444 81 153633 716179 17.66 869812 82 150840 701325 17.70 852165 83 149766 696518 17.70 846284 84 146408 696769 17.36 843177 85 143482 676843 17.49 820325 86 141468 673108 17.37 814576 87 139215 657944 17.46 797159 88 139104 655518 17.51 794622 89 135321 643955 17.36 779276 90 133509 639740 17.27 773249 91 132993 622294 17.61 755287 92 129251 611461 17.45 740712 93 128072 609091 17.37 737163 94 122695 581586 17.42 704281 95 120332 577258 17.25 697590 96 119122 573544 17.20 692666 97 115686 558523 17.16 674209 98 114455 549844 17.23 664299 99 112551 540934 17.22 653485 100 110616 530251 17.26 640867 101 110198 526567 17.31 636765 102 107252 523714 17.00 630966 103 104630 505716 17.14 610346 104 103412 497661 17.20 601073 105 102249 490049 17.26 592298 106 99541 481050 17.14 580591 107 96559 471235 17.01 567794 108 95415 473615 16.77 569030 109 93749 459947 16.93 553696 110 91373 452007 16.82 543380 111 90406 447684 16.80 538090 112 88207 435381 16.85 523588 113 87055 430277 16.83 517332 114 87507 423624 17.12 511131 115 84767 412932 17.03 497699 116 82569 410294 16.75 492863 117 79706 405437 16.43 485143 118 77751 393800 16.49 471551 119 77096 393147 16.39 470243 120 76008 379383 16.69 455391 121 73552 370439 16.57 443991 122 73007 364341 16.69 437348 123 70891 357306 16.56 428197 124 70382 347991 16.82 418373 125 71389 345515 17.12 416904 126 67679 339767 16.61 407446 127 65778 330420 16.60 396198 128 63998 322785 16.55 386783 129 62915 316228 16.59 379143 130 61029 309964 16.45 370993 131 60804 305015 16.62 365819 132 58934 300421 16.40 359355 133 57902 291371 16.58 349273 134 56696 286712 16.51 343408 135 55487 282592 16.41 338079 136 55172 276303 16.64 331475 137 54184 273716 16.52 327900 138 52343 267044 16.39 319387 139 52112 262085 16.59 314197 140 51337 257620 16.62 308957 141 48503 251499 16.17 300002 142 47062 243771 16.18 290833 143 45880 240756 16.01 286636 144 45265 236110 16.09 281375 145 44166 232273 15.98 276439 146 43745 230276 15.96 274021 147 43266 230237 15.82 273503 148 42663 222987 16.06 265650 149 40659 216775 15.79 257434 150 39280 211946 15.64 251226 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 262947 3236893 7.51 3499840 2 131080 1220883 9.70 1351963 3 99737 1777795 5.31 1877532 4 112730 1540555 6.82 1653285 5 47058 1951650 2.35 1998708 6 30820 2449320 1.24 2480140 7 24521 1619370 1.49 1643891 8 25308 1550486 1.61 1575794 9 23305 1590279 1.44 1613584 10 28564 1551518 1.81 1580082 11 43774 1568656 2.71 1612430 12 24489 1638468 1.47 1662957 13 26119 1681018 1.53 1707137 14 20201 1657487 1.20 1677688 15 21170 1609790 1.30 1630960 16 22731 1614763 1.39 1637494 17 19658 1645100 1.18 1664758 18 20334 1690170 1.19 1710504 19 18938 1594692 1.17 1613630 20 18959 1604507 1.17 1623466 21 19201 1615197 1.17 1634398 22 18269 1644281 1.10 1662550 23 18289 1648499 1.10 1666788 24 18326 1634292 1.11 1652618 25 18037 1657929 1.08 1675966 26 17911 1632128 1.09 1650039 27 18118 1633727 1.10 1651845 28 18042 1646535 1.08 1664577 29 18106 1636078 1.09 1654184 30 17799 1633197 1.08 1650996 31 17573 1631587 1.07 1649160 32 17371 1614738 1.06 1632109 33 17966 1645955 1.08 1663921 34 17667 1644660 1.06 1662327 35 17664 1642814 1.06 1660478 36 17552 1616162 1.07 1633714 37 17824 1659270 1.06 1677094 38 17616 1620460 1.08 1638076 39 18319 1660428 1.09 1678747 40 17456 1622846 1.06 1640302 41 18026 1641301 1.09 1659327 42 17989 1629213 1.09 1647202 43 17856 1637940 1.08 1655796 44 17673 1605322 1.09 1622995 45 17787 1608605 1.09 1626392 46 17824 1599967 1.10 1617791 47 17896 1577917 1.12 1595813 48 18221 1578124 1.14 1596345 49 18315 1605534 1.13 1623849 50 18231 1576691 1.14 1594922 51 18289 1577481 1.15 1595770 52 18261 1576220 1.15 1594481 53 18493 1570636 1.16 1589129 54 18213 1536473 1.17 1554686 55 18366 1557770 1.17 1576136 56 18175 1533201 1.17 1551376 57 18892 1532069 1.22 1550961 58 18459 1517910 1.20 1536369 59 18819 1501782 1.24 1520601 60 18890 1507590 1.24 1526480 61 19186 1515192 1.25 1534378 62 18990 1482870 1.26 1501860 63 18756 1460343 1.27 1479099 64 18779 1452079 1.28 1470858 65 18811 1448659 1.28 1467470 66 19011 1433809 1.31 1452820 67 19112 1438131 1.31 1457243 68 18776 1404820 1.32 1423596 69 18971 1397884 1.34 1416855 70 18701 1398020 1.32 1416721 71 18693 1365526 1.35 1384219 72 18931 1352028 1.38 1370959 73 18517 1343945 1.36 1362462 74 18684 1319495 1.40 1338179 75 18737 1306035 1.41 1324772 76 18479 1298019 1.40 1316498 77 18497 1272322 1.43 1290819 78 18554 1252738 1.46 1271292 79 18259 1246561 1.44 1264820 80 18056 1218023 1.46 1236079 81 18377 1234105 1.47 1252482 82 17663 1191668 1.46 1209331 83 17719 1175703 1.48 1193422 84 17902 1157224 1.52 1175126 85 17745 1157621 1.51 1175366 86 17041 1129232 1.49 1146273 87 17439 1121203 1.53 1138642 88 17218 1106178 1.53 1123396 89 17115 1086508 1.55 1103623 90 17121 1081121 1.56 1098242 91 16889 1064654 1.56 1081543 92 16373 1034729 1.56 1051102 93 16683 1031243 1.59 1047926 94 16339 1026602 1.57 1042941 95 15954 979254 1.60 995208 96 15670 961284 1.60 976954 97 15793 963976 1.61 979769 98 15334 928827 1.62 944161 99 15283 919947 1.63 935230 100 15062 907671 1.63 922733 101 15082 895357 1.66 910439 102 15153 904548 1.65 919701 103 14605 863483 1.66 878088 104 14393 837225 1.69 851618 105 14038 822220 1.68 836258 106 13887 808016 1.69 821903 107 13527 793166 1.68 806693 108 13465 780869 1.70 794334 109 13383 770552 1.71 783935 110 13311 750895 1.74 764206 111 13020 745518 1.72 758538 112 12816 733363 1.72 746179 113 12667 714040 1.74 726707 114 12312 704948 1.72 717260 115 12115 686093 1.74 698208 116 12271 669917 1.80 682188 117 11846 664305 1.75 676151 118 11726 649398 1.77 661124 119 11566 638660 1.78 650226 120 11571 628028 1.81 639599 121 11281 616973 1.80 628254 122 11193 600771 1.83 611964 123 11025 598848 1.81 609873 124 10710 577934 1.82 588644 125 10609 570990 1.82 581599 126 10523 558473 1.85 568996 127 10273 554217 1.82 564490 128 10181 539533 1.85 549714 129 9894 534975 1.82 544869 130 9920 516597 1.88 526517 131 9607 506146 1.86 515753 132 9536 501793 1.86 511329 133 9389 495977 1.86 505366 134 9235 481811 1.88 491046 135 9072 470852 1.89 479924 136 8750 463406 1.85 472156 137 8731 458106 1.87 466837 138 8505 446818 1.87 455323 139 8348 437927 1.87 446275 140 8156 423345 1.89 431501 141 7926 418592 1.86 426518 142 7785 410810 1.86 418595 143 7349 397028 1.82 404377 144 7428 394269 1.85 401697 145 7077 387442 1.79 394519 146 7042 382501 1.81 389543 147 6775 374602 1.78 381377 148 7266 366097 1.95 373363 149 7413 361508 2.01 368921 150 7239 354920 2.00 362159 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 701155 2837406 19.81 3538561 2 561790 3698480 13.19 4260270 3 428239 3496456 10.91 3924695 4 437614 3321327 11.64 3758941 5 235963 4101845 5.44 4337808 6 177096 4618963 3.69 4796059 7 165118 5342547 3.00 5507665 8 163873 5268880 3.02 5432753 9 134763 4974152 2.64 5108915 10 125378 4867496 2.51 4992874 11 133827 4768786 2.73 4902613 12 121570 4749558 2.50 4871128 13 120485 4827340 2.44 4947825 14 110231 4754202 2.27 4864433 15 121749 4684141 2.53 4805890 16 122791 4646479 2.57 4769270 17 114456 4599873 2.43 4714329 18 104761 4681920 2.19 4786681 19 114884 4715653 2.38 4830537 20 106244 4767809 2.18 4874053 21 112446 4651689 2.36 4764135 22 99307 4695466 2.07 4794773 23 109988 4728616 2.27 4838604 24 98516 4695730 2.05 4794246 25 106842 4770731 2.19 4877573 26 98239 4772669 2.02 4870908 27 103403 4765012 2.12 4868415 28 97858 4843154 1.98 4941012 29 103490 4868695 2.08 4972185 30 93272 4833110 1.89 4926382 31 100667 4853514 2.03 4954181 32 97105 4827834 1.97 4924939 33 95765 4833961 1.94 4929726 34 92112 4867520 1.86 4959632 35 95878 4831652 1.95 4927530 36 88184 4829322 1.79 4917506 37 95040 4861093 1.92 4956133 38 88404 4848201 1.79 4936605 39 94700 4828827 1.92 4923527 40 86662 4821015 1.77 4907677 41 91939 4928522 1.83 5020461 42 82634 4826978 1.68 4909612 43 93889 4834625 1.91 4928514 44 84530 4853706 1.71 4938236 45 91069 4857494 1.84 4948563 46 83992 4858142 1.70 4942134 47 90657 4851528 1.83 4942185 48 83736 4785265 1.72 4869001 49 88522 4819385 1.80 4907907 50 85145 4817274 1.74 4902419 51 88847 4782625 1.82 4871472 52 83306 4732398 1.73 4815704 53 85606 4721402 1.78 4807008 54 83824 4661800 1.77 4745624 55 84667 4642312 1.79 4726979 56 84065 4638204 1.78 4722269 57 84292 4585630 1.80 4669922 58 82540 4603796 1.76 4686336 59 87262 4596365 1.86 4683627 60 80156 4493075 1.75 4573231 61 83606 4486237 1.83 4569843 62 80529 4496678 1.76 4577207 63 81888 4375330 1.84 4457218 64 78949 4343305 1.79 4422254 65 83721 4300012 1.91 4383733 66 75179 4263205 1.73 4338384 67 82800 4276909 1.90 4359709 68 77686 4187863 1.82 4265549 69 79378 4188538 1.86 4267916 70 77915 4149529 1.84 4227444 71 79865 4082649 1.92 4162514 72 76385 4029979 1.86 4106364 73 78046 4018191 1.91 4096237 74 75776 4017015 1.85 4092791 75 75237 3914575 1.89 3989812 76 76215 3868065 1.93 3944280 77 74000 3837250 1.89 3911250 78 74097 3827761 1.90 3901858 79 74675 3773995 1.94 3848670 80 72461 3701202 1.92 3773663 81 72767 3654690 1.95 3727457 82 71084 3628527 1.92 3699611 83 72501 3531193 2.01 3603694 84 68943 3470783 1.95 3539726 85 69589 3422702 1.99 3492291 86 67424 3391614 1.95 3459038 87 69754 3330935 2.05 3400689 88 65241 3312444 1.93 3377685 89 69119 3270074 2.07 3339193 90 64580 3182862 1.99 3247442 91 66913 3157436 2.08 3224349 92 65337 3115875 2.05 3181212 93 64316 3060940 2.06 3125256 94 64016 3033845 2.07 3097861 95 63892 2989274 2.09 3053166 96 61001 2967980 2.01 3028981 97 61431 2920844 2.06 2982275 98 62245 2825830 2.16 2888075 99 59202 2770187 2.09 2829389 100 59926 2729148 2.15 2789074 101 58994 2689775 2.15 2748769 102 57187 2661036 2.10 2718223 103 58634 2642241 2.17 2700875 104 56530 2585859 2.14 2642389 105 56336 2563666 2.15 2620002 106 54612 2487532 2.15 2542144 107 54185 2429992 2.18 2484177 108 51996 2411127 2.11 2463123 109 54541 2348524 2.27 2403065 110 51092 2312211 2.16 2363303 111 52353 2303320 2.22 2355673 112 50394 2241426 2.20 2291820 113 50664 2189322 2.26 2239986 114 48966 2162935 2.21 2211901 115 48921 2123196 2.25 2172117 116 48555 2075211 2.29 2123766 117 47250 2036952 2.27 2084202 118 46010 1994122 2.26 2040132 119 46048 1959809 2.30 2005857 120 46073 1919145 2.34 1965218 121 43549 1882172 2.26 1925721 122 44524 1851318 2.35 1895842 123 42508 1809357 2.30 1851865 124 42712 1776397 2.35 1819109 125 42643 1746020 2.38 1788663 126 40161 1708831 2.30 1748992 127 40728 1683088 2.36 1723816 128 39068 1644664 2.32 1683732 129 38321 1612883 2.32 1651204 130 37390 1581349 2.31 1618739 131 39060 1558373 2.45 1597433 132 35767 1516090 2.30 1551857 133 37042 1485998 2.43 1523040 134 35428 1457637 2.37 1493065 135 34470 1426999 2.36 1461469 136 34333 1403203 2.39 1437536 137 33884 1384175 2.39 1418059 138 32881 1361126 2.36 1394007 139 32800 1331164 2.40 1363964 140 31531 1294647 2.38 1326178 141 30802 1265597 2.38 1296399 142 31729 1243966 2.49 1275695 143 29662 1218474 2.38 1248136 144 29490 1195725 2.41 1225215 145 28699 1177671 2.38 1206370 146 28038 1159869 2.36 1187907 147 27719 1141388 2.37 1169107 148 27809 1127352 2.41 1155161 149 29587 1105807 2.61 1135394 150 27649 1079943 2.50 1107592 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 40462 172931 18.96 213393 2 39713 239914 14.20 279627 3 32162 317719 9.19 349881 4 39997 224189 15.14 264186 5 30141 262644 10.29 292785 6 23072 189270 10.87 212342 7 21844 169242 11.43 191086 8 25107 175803 12.50 200910 9 24769 172677 12.54 197446 10 27023 162581 14.25 189604 11 31179 164170 15.96 195349 12 41083 163130 20.12 204213 13 39933 160106 19.96 200039 14 28781 155582 15.61 184363 15 28028 150088 15.74 178116 16 28803 149117 16.19 177920 17 30063 152001 16.51 182064 18 27302 146699 15.69 174001 19 25905 138548 15.75 164453 20 25864 136800 15.90 162664 21 26261 137185 16.07 163446 22 25298 134638 15.82 159936 23 24418 128915 15.92 153333 24 24590 129432 15.97 154022 25 25172 126421 16.60 151593 26 23964 122541 16.36 146505 27 23901 120887 16.51 144788 28 23048 116579 16.51 139627 29 22299 113434 16.43 135733 30 21690 111637 16.27 133327 31 21710 109890 16.50 131600 32 20711 105681 16.39 126392 33 20093 104639 16.11 124732 34 20467 101084 16.84 121551 35 19620 99674 16.45 119294 36 19376 101884 15.98 121260 37 18919 96142 16.44 115061 38 18800 93802 16.70 112602 39 18022 92584 16.29 110606 40 17722 87816 16.79 105538 41 17823 86815 17.03 104638 42 17424 85732 16.89 103156 43 16948 83511 16.87 100459 44 16918 82569 17.01 99487 45 16257 80243 16.85 96500 46 15575 78842 16.50 94417 47 15374 76167 16.79 91541 48 15137 75467 16.71 90604 49 15171 73495 17.11 88666 50 14653 71895 16.93 86548 51 14371 70846 16.86 85217 52 13805 68698 16.73 82503 53 13443 65885 16.95 79328 54 13138 65587 16.69 78725 55 12758 63826 16.66 76584 56 12553 62077 16.82 74630 57 12816 62997 16.90 75813 58 12168 60789 16.68 72957 59 12019 59036 16.92 71055 60 11768 58193 16.82 69961 61 11473 56055 16.99 67528 62 11071 54663 16.84 65734 63 10832 52808 17.02 63640 64 10598 52193 16.88 62791 65 10660 51386 17.18 62046 66 10207 50851 16.72 61058 67 10298 49465 17.23 59763 68 9616 48181 16.64 57797 69 9374 47232 16.56 56606 70 9265 45729 16.85 54994 71 9036 44769 16.79 53805 72 9078 44090 17.07 53168 73 8912 43077 17.14 51989 74 8687 41366 17.36 50053 75 8524 40881 17.25 49405 76 8135 39976 16.91 48111 77 7975 39573 16.77 47548 78 7787 38208 16.93 45995 79 7783 37280 17.27 45063 80 7609 36346 17.31 43955 81 7343 36109 16.90 43452 82 7276 35428 17.04 42704 83 7439 34926 17.56 42365 84 6919 34089 16.87 41008 85 6691 33215 16.77 39906 86 6699 31930 17.34 38629 87 6574 31574 17.23 38148 88 6372 31371 16.88 37743 89 6271 30739 16.94 37010 90 6077 30139 16.78 36216 91 6073 29045 17.29 35118 92 5772 28150 17.02 33922 93 5772 28426 16.88 34198 94 5514 26497 17.23 32011 95 5161 25917 16.61 31078 96 5272 25927 16.90 31199 97 4999 24471 16.96 29470 98 4983 24230 17.06 29213 99 4884 23745 17.06 28629 100 4750 23350 16.90 28100 101 4791 23068 17.20 27859 102 4716 23255 16.86 27971 103 4454 21981 16.85 26435 104 4414 21313 17.16 25727 105 4312 21189 16.91 25501 106 4236 20475 17.14 24711 107 3958 19931 16.57 23889 108 3997 20222 16.50 24219 109 3960 19505 16.88 23465 110 3767 18755 16.73 22522 111 3776 18562 16.90 22338 112 3608 17757 16.89 21365 113 3625 17567 17.11 21192 114 3604 17358 17.19 20962 115 3644 16992 17.66 20636 116 3321 16574 16.69 19895 117 3149 16542 15.99 19691 118 3047 15889 16.09 18936 119 3175 15915 16.63 19090 120 3102 15025 17.11 18127 121 3068 14696 17.27 17764 122 2929 14759 16.56 17688 123 2812 14112 16.62 16924 124 2921 14040 17.22 16961 125 2980 13912 17.64 16892 126 2743 13718 16.66 16461 127 2599 13004 16.66 15603 128 2526 12810 16.47 15336 129 2552 12287 17.20 14839 130 2417 12177 16.56 14594 131 2304 11941 16.17 14245 132 2291 11591 16.50 13882 133 2238 11534 16.25 13772 134 2197 11014 16.63 13211 135 2260 11046 16.98 13306 136 2187 10657 17.03 12844 137 2081 10475 16.57 12556 138 2053 10191 16.77 12244 139 2059 10222 16.77 12281 140 2010 9953 16.80 11963 141 1942 9727 16.64 11669 142 1894 9422 16.74 11316 143 1728 9262 15.72 10990 144 1746 8868 16.45 10614 145 1650 8746 15.87 10396 146 1752 8864 16.50 10616 147 1757 8957 16.40 10714 148 1622 8665 15.77 10287 149 1533 8313 15.57 9846 150 1521 8057 15.88 9578 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 53758 665681 7.47 719439 2 28651 293839 8.88 322490 3 23933 337441 6.62 361374 4 24118 305275 7.32 329393 5 15037 359781 4.01 374818 6 6960 437054 1.57 444014 7 5710 301188 1.86 306898 8 6002 283856 2.07 289858 9 5190 284951 1.79 290141 10 7576 266865 2.76 274441 11 13793 261641 5.01 275434 12 5531 267773 2.02 273304 13 6417 268816 2.33 275233 14 3842 267036 1.42 270878 15 4286 248766 1.69 253052 16 4978 239063 2.04 244041 17 3500 243309 1.42 246809 18 3858 255824 1.49 259682 19 3324 225563 1.45 228887 20 3191 226441 1.39 229632 21 3093 218884 1.39 221977 22 2838 217886 1.29 220724 23 2765 217009 1.26 219774 24 2584 206409 1.24 208993 25 2530 206931 1.21 209461 26 2472 201048 1.21 203520 27 2541 198241 1.27 200782 28 2286 194907 1.16 197193 29 2295 193386 1.17 195681 30 2142 186928 1.13 189070 31 2019 178411 1.12 180430 32 1943 172650 1.11 174593 33 1912 175831 1.08 177743 34 1817 170356 1.06 172173 35 1838 167451 1.09 169289 36 1760 161890 1.08 163650 37 1843 164188 1.11 166031 38 1666 154931 1.06 156597 39 1580 157066 1.00 158646 40 1546 148923 1.03 150469 41 1525 149448 1.01 150973 42 1486 144152 1.02 145638 43 1514 141864 1.06 143378 44 1416 134902 1.04 136318 45 1413 134771 1.04 136184 46 1420 129470 1.08 130890 47 1360 126430 1.06 127790 48 1312 123597 1.05 124909 49 1345 123720 1.08 125065 50 1307 120383 1.07 121690 51 1281 119587 1.06 120868 52 1269 114270 1.10 115539 53 1171 112601 1.03 113772 54 1174 107182 1.08 108356 55 1141 107869 1.05 109010 56 1169 104800 1.10 105969 57 1144 103496 1.09 104640 58 1019 99941 1.01 100960 59 1058 96976 1.08 98034 60 1079 96768 1.10 97847 61 1066 95218 1.11 96284 62 1015 94081 1.07 95096 63 1005 89892 1.11 90897 64 998 87222 1.13 88220 65 961 87112 1.09 88073 66 927 84682 1.08 85609 67 938 84496 1.10 85434 68 882 80073 1.09 80955 69 905 79293 1.13 80198 70 783 78272 0.99 79055 71 844 76425 1.09 77269 72 824 75677 1.08 76501 73 802 72779 1.09 73581 74 824 71066 1.15 71890 75 771 69590 1.10 70361 76 749 68189 1.09 68938 77 733 66605 1.09 67338 78 743 64420 1.14 65163 79 744 63852 1.15 64596 80 709 61776 1.13 62485 81 677 62219 1.08 62896 82 654 59255 1.09 59909 83 638 59087 1.07 59725 84 608 56630 1.06 57238 85 689 55955 1.22 56644 86 655 54231 1.19 54886 87 651 53811 1.20 54462 88 624 52973 1.16 53597 89 590 51665 1.13 52255 90 594 50949 1.15 51543 91 565 50295 1.11 50860 92 509 48389 1.04 48898 93 584 48334 1.19 48918 94 588 48468 1.20 49056 95 548 44468 1.22 45016 96 524 43213 1.20 43737 97 498 43524 1.13 44022 98 452 41893 1.07 42345 99 457 40764 1.11 41221 100 468 40311 1.15 40779 101 491 40216 1.21 40707 102 491 40978 1.18 41469 103 424 38039 1.10 38463 104 435 37174 1.16 37609 105 422 35682 1.17 36104 106 453 34378 1.30 34831 107 421 34541 1.20 34962 108 407 33606 1.20 34013 109 404 32586 1.22 32990 110 394 31899 1.22 32293 111 371 31038 1.18 31409 112 365 31017 1.16 31382 113 360 29747 1.20 30107 114 368 30084 1.21 30452 115 318 28603 1.10 28921 116 337 27866 1.19 28203 117 320 27611 1.15 27931 118 328 27016 1.20 27344 119 334 26521 1.24 26855 120 306 25949 1.17 26255 121 313 25141 1.23 25454 122 299 24512 1.21 24811 123 314 24585 1.26 24899 124 277 23486 1.17 23763 125 303 24017 1.25 24320 126 271 22763 1.18 23034 127 263 22633 1.15 22896 128 258 22142 1.15 22400 129 269 21993 1.21 22262 130 246 20881 1.16 21127 131 257 20300 1.25 20557 132 247 19842 1.23 20089 133 244 19871 1.21 20115 134 218 19123 1.13 19341 135 225 19270 1.15 19495 136 187 18590 1.00 18777 137 237 18639 1.26 18876 138 215 17676 1.20 17891 139 225 17550 1.27 17775 140 191 16985 1.11 17176 141 212 16697 1.25 16909 142 164 16270 1.00 16434 143 175 15760 1.10 15935 144 190 15839 1.19 16029 145 202 15509 1.29 15711 146 172 15592 1.09 15764 147 177 15199 1.15 15376 148 173 14198 1.20 14371 149 176 14308 1.22 14484 150 210 14078 1.47 14288 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 134095 652862 17.04 786957 2 113389 815525 12.21 928914 3 86475 742314 10.43 828789 4 90490 699249 11.46 789739 5 57372 797787 6.71 855159 6 41803 874541 4.56 916344 7 34137 1005588 3.28 1039725 8 38765 970751 3.84 1009516 9 25225 899104 2.73 924329 10 24645 869009 2.76 893654 11 25631 827384 3.00 853015 12 24765 811125 2.96 835890 13 21500 822460 2.55 843960 14 20059 798138 2.45 818197 15 22522 777429 2.82 799951 16 26518 740317 3.46 766835 17 19498 727898 2.61 747396 18 17904 728198 2.40 746102 19 18981 724568 2.55 743549 20 17524 713961 2.40 731485 21 18708 675785 2.69 694493 22 14830 672191 2.16 687021 23 16422 664107 2.41 680529 24 13994 652536 2.10 666530 25 15136 648937 2.28 664073 26 13714 633842 2.12 647556 27 13322 623107 2.09 636429 28 13279 620771 2.09 634050 29 12908 605433 2.09 618341 30 11515 593983 1.90 605498 31 12084 585204 2.02 597288 32 12311 568373 2.12 580684 33 10985 560473 1.92 571458 34 11115 548403 1.99 559518 35 10659 533809 1.96 544468 36 9965 523538 1.87 533503 37 10747 517803 2.03 528550 38 9689 503866 1.89 513555 39 10401 497848 2.05 508249 40 9117 483214 1.85 492331 41 9920 483208 2.01 493128 42 8383 464525 1.77 472908 43 10194 458903 2.17 469097 44 8080 449663 1.77 457743 45 9318 445787 2.05 455105 46 8267 434401 1.87 442668 47 8994 424477 2.07 433471 48 7993 412068 1.90 420061 49 8297 407221 2.00 415518 50 8153 400186 2.00 408339 51 8034 391081 2.01 399115 52 7550 379888 1.95 387438 53 7586 373407 1.99 380993 54 7956 363906 2.14 371862 55 7001 356603 1.93 363604 56 7646 348991 2.14 356637 57 7189 339796 2.07 346985 58 7013 339064 2.03 346077 59 7504 334621 2.19 342125 60 6243 321377 1.91 327620 61 6982 314973 2.17 321955 62 6417 313105 2.01 319522 63 6430 298223 2.11 304653 64 6143 292494 2.06 298637 65 7179 286300 2.45 293479 66 5106 280949 1.78 286055 67 6662 280727 2.32 287389 68 5744 271266 2.07 277010 69 5977 268118 2.18 274095 70 5878 261959 2.19 267837 71 5857 255655 2.24 261512 72 5665 251131 2.21 256796 73 5659 246813 2.24 252472 74 5328 245879 2.12 251207 75 5246 234998 2.18 240244 76 5662 228824 2.41 234486 77 4693 226261 2.03 230954 78 5196 225425 2.25 230621 79 4966 221204 2.20 226170 80 5002 214139 2.28 219141 81 4869 209842 2.27 214711 82 4588 207226 2.17 211814 83 4969 198613 2.44 203582 84 4249 194111 2.14 198360 85 4520 189848 2.33 194368 86 4139 186656 2.17 190795 87 4758 182798 2.54 187556 88 3738 180732 2.03 184470 89 4617 177565 2.53 182182 90 3590 171119 2.05 174709 91 4221 168719 2.44 172940 92 3899 166058 2.29 169957 93 3693 161220 2.24 164913 94 3791 160772 2.30 164563 95 3657 156915 2.28 160572 96 3468 156444 2.17 159912 97 3496 152318 2.24 155814 98 3928 145225 2.63 149153 99 2988 142163 2.06 145151 100 3595 139042 2.52 142637 101 3239 136478 2.32 139717 102 3168 134604 2.30 137772 103 3253 133570 2.38 136823 104 3063 130014 2.30 133077 105 3076 129379 2.32 132455 106 2851 123570 2.26 126421 107 2939 119712 2.40 122651 108 2667 118377 2.20 121044 109 3216 114533 2.73 117749 110 2482 112739 2.15 115221 111 2963 113240 2.55 116203 112 2599 109576 2.32 112175 113 2666 106237 2.45 108903 114 2451 104689 2.29 107140 115 2476 102600 2.36 105076 116 2604 100155 2.53 102759 117 2364 97322 2.37 99686 118 2304 95109 2.37 97413 119 2285 93378 2.39 95663 120 2476 90475 2.66 92951 121 2013 88499 2.22 90512 122 2426 86570 2.73 88996 123 2021 84465 2.34 86486 124 2228 83096 2.61 85324 125 2159 81362 2.58 83521 126 1866 79878 2.28 81744 127 2088 78068 2.60 80156 128 1838 75901 2.36 77739 129 1823 75039 2.37 76862 130 1763 73735 2.34 75498 131 2066 73065 2.75 75131 132 1490 70951 2.06 72441 133 1877 68641 2.66 70518 134 1661 67268 2.41 68929 135 1671 65721 2.48 67392 136 1656 65066 2.48 66722 137 1615 64007 2.46 65622 138 1567 63607 2.40 65174 139 1534 61854 2.42 63388 140 1481 59466 2.43 60947 141 1463 58089 2.46 59552 142 1670 57200 2.84 58870 143 1235 55537 2.18 56772 144 1444 54903 2.56 56347 145 1316 53874 2.38 55190 146 1336 53036 2.46 54372 147 1298 52272 2.42 53570 148 1262 51510 2.39 52772 149 1402 50134 2.72 51536 150 1236 48805 2.47 50041