CF04-CM04-Zygote_R1_001.fastp-trim.20220827_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 22008831 lines in total Total number of methylation call strings processed: 44017662 Final Cytosine Methylation Report ================================= Total number of C's analysed: 385869243 Total methylated C's in CpG context: 9515408 Total methylated C's in CHG context: 2159043 Total methylated C's in CHH context: 10976587 Total C to T conversions in CpG context: 41098271 Total C to T conversions in CHG context: 73932799 Total C to T conversions in CHH context: 248187135 C methylated in CpG context: 18.8% C methylated in CHG context: 2.8% C methylated in CHH context: 4.2%