CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 170291 445832 27.64 616123 2 168715 656903 20.43 825618 3 141103 870627 13.95 1011730 4 142979 711663 16.73 854642 5 129826 861698 13.09 991524 6 101581 623812 14.00 725393 7 102283 575678 15.09 677961 8 115502 608921 15.94 724423 9 121057 623260 16.26 744317 10 126858 601902 17.41 728760 11 145370 632400 18.69 777770 12 179132 634677 22.01 813809 13 167072 636706 20.79 803778 14 148092 642265 18.74 790357 15 148153 638894 18.82 787047 16 149943 640369 18.97 790312 17 154146 652226 19.12 806372 18 149771 653350 18.65 803121 19 148302 633112 18.98 781414 20 152955 645768 19.15 798723 21 155932 658923 19.14 814855 22 154729 649649 19.24 804378 23 156193 651654 19.33 807847 24 156515 659397 19.18 815912 25 157977 655392 19.42 813369 26 157963 649112 19.57 807075 27 157206 656135 19.33 813341 28 156866 645361 19.55 802227 29 157489 645608 19.61 803097 30 156030 652813 19.29 808843 31 156316 651850 19.34 808166 32 157857 648863 19.57 806720 33 156238 650413 19.37 806651 34 157737 647483 19.59 805220 35 158676 648947 19.65 807623 36 157204 665787 19.10 822991 37 156984 643126 19.62 800110 38 158782 652683 19.57 811465 39 157746 654125 19.43 811871 40 156678 637437 19.73 794115 41 158195 640064 19.82 798259 42 157772 645022 19.65 802794 43 158645 639771 19.87 798416 44 160073 643845 19.91 803918 45 157550 638000 19.80 795550 46 156033 631887 19.80 787920 47 157148 632506 19.90 789654 48 157514 637308 19.82 794822 49 156083 631626 19.81 787709 50 155937 634167 19.74 790104 51 155120 629480 19.77 784600 52 152158 624128 19.60 776286 53 153206 616529 19.90 769735 54 151566 615450 19.76 767016 55 151523 613245 19.81 764768 56 150846 611648 19.78 762494 57 151873 614497 19.82 766370 58 148514 606228 19.68 754742 59 148485 603875 19.74 752360 60 147528 603990 19.63 751518 61 146168 589115 19.88 735283 62 145694 587906 19.86 733600 63 144216 584910 19.78 729126 64 142827 582902 19.68 725729 65 142560 578809 19.76 721369 66 142485 580896 19.70 723381 67 141816 570588 19.91 712404 68 139793 571098 19.66 710891 69 138120 566646 19.60 704766 70 135838 558427 19.57 694265 71 136207 546587 19.95 682794 72 134036 544262 19.76 678298 73 132788 534630 19.90 667418 74 130810 529316 19.82 660126 75 129567 525014 19.79 654581 76 127871 518829 19.77 646700 77 127131 511954 19.89 639085 78 124508 507824 19.69 632332 79 122840 500658 19.70 623498 80 122862 497976 19.79 620838 81 120879 493748 19.67 614627 82 119965 487280 19.76 607245 83 118988 484138 19.73 603126 84 117548 481781 19.61 599329 85 114129 469189 19.57 583318 86 113026 465067 19.55 578093 87 112107 458781 19.64 570888 88 110683 455840 19.54 566523 89 108779 447525 19.55 556304 90 107795 445906 19.47 553701 91 106882 434813 19.73 541695 92 104176 428870 19.54 533046 93 103178 426971 19.46 530149 94 99532 407984 19.61 507516 95 98736 405225 19.59 503961 96 96864 402860 19.38 499724 97 94703 392802 19.43 487505 98 93189 389282 19.31 482471 99 92431 381620 19.50 474051 100 90588 374379 19.48 464967 101 89534 371878 19.40 461412 102 87675 368084 19.24 455759 103 85826 357398 19.36 443224 104 85283 352370 19.49 437653 105 84028 347809 19.46 431837 106 82033 340915 19.40 422948 107 79832 336054 19.20 415886 108 79103 335224 19.09 414327 109 77811 326212 19.26 404023 110 76525 320546 19.27 397071 111 74635 316694 19.07 391329 112 73492 309387 19.19 382879 113 72704 304625 19.27 377329 114 71632 300742 19.24 372374 115 69998 294691 19.19 364689 116 68302 292715 18.92 361017 117 67299 289049 18.89 356348 118 65410 281190 18.87 346600 119 65098 279493 18.89 344591 120 63095 270073 18.94 333168 121 62226 266262 18.94 328488 122 61448 261579 19.02 323027 123 60251 255681 19.07 315932 124 59265 252372 19.02 311637 125 59395 247497 19.35 306892 126 56661 242962 18.91 299623 127 55572 237591 18.96 293163 128 54176 231833 18.94 286009 129 53345 226787 19.04 280132 130 51928 223232 18.87 275160 131 51275 219969 18.90 271244 132 50356 216136 18.90 266492 133 49047 210587 18.89 259634 134 48454 207168 18.96 255622 135 47653 204079 18.93 251732 136 46712 199995 18.93 246707 137 46325 196776 19.06 243101 138 44688 193626 18.75 238314 139 44528 189692 19.01 234220 140 42989 187337 18.66 230326 141 41364 182183 18.50 223547 142 40456 177451 18.57 217907 143 39570 175605 18.39 215175 144 38168 171341 18.22 209509 145 37352 169524 18.06 206876 146 37010 168261 18.03 205271 147 37234 166883 18.24 204117 148 35986 161937 18.18 197923 149 34774 158180 18.02 192954 150 33511 155125 17.76 188636 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 259826 1765901 12.83 2025727 2 150550 796800 15.89 947350 3 122723 1074147 10.25 1196870 4 121290 933127 11.50 1054417 5 53412 1269909 4.04 1323321 6 41597 1530307 2.65 1571904 7 33401 1049853 3.08 1083254 8 35327 1033543 3.31 1068870 9 32420 1056266 2.98 1088686 10 38629 1040124 3.58 1078753 11 64442 1049323 5.79 1113765 12 33805 1091324 3.00 1125129 13 34181 1118897 2.96 1153078 14 29269 1113618 2.56 1142887 15 30282 1084223 2.72 1114505 16 33724 1089459 3.00 1123183 17 29574 1112765 2.59 1142339 18 30869 1143688 2.63 1174557 19 29136 1084746 2.62 1113882 20 29631 1100440 2.62 1130071 21 29160 1100406 2.58 1129566 22 28587 1120462 2.49 1149049 23 28329 1118322 2.47 1146651 24 27899 1108907 2.45 1136806 25 28053 1119606 2.44 1147659 26 27416 1105040 2.42 1132456 27 27539 1108763 2.42 1136302 28 27365 1121705 2.38 1149070 29 27484 1113186 2.41 1140670 30 27758 1114148 2.43 1141906 31 27300 1112825 2.39 1140125 32 26928 1102956 2.38 1129884 33 27488 1116239 2.40 1143727 34 27354 1115964 2.39 1143318 35 27306 1111953 2.40 1139259 36 27013 1100771 2.40 1127784 37 27664 1122920 2.40 1150584 38 27157 1106066 2.40 1133223 39 28096 1128680 2.43 1156776 40 27414 1107630 2.42 1135044 41 27594 1117190 2.41 1144784 42 27501 1109798 2.42 1137299 43 27755 1111284 2.44 1139039 44 27409 1093244 2.45 1120653 45 27581 1098317 2.45 1125898 46 27347 1089673 2.45 1117020 47 27546 1078679 2.49 1106225 48 27807 1079453 2.51 1107260 49 28245 1092419 2.52 1120664 50 27989 1081810 2.52 1109799 51 28043 1078380 2.53 1106423 52 28413 1077818 2.57 1106231 53 28097 1071393 2.56 1099490 54 28229 1056433 2.60 1084662 55 28532 1066327 2.61 1094859 56 28379 1050073 2.63 1078452 57 28571 1050797 2.65 1079368 58 28221 1040286 2.64 1068507 59 28744 1034688 2.70 1063432 60 29190 1038285 2.73 1067475 61 29129 1038617 2.73 1067746 62 28835 1023151 2.74 1051986 63 28483 1008971 2.75 1037454 64 28852 1002305 2.80 1031157 65 28732 999592 2.79 1028324 66 28842 992794 2.82 1021636 67 29432 995498 2.87 1024930 68 28253 974506 2.82 1002759 69 28806 971723 2.88 1000529 70 28854 968746 2.89 997600 71 28533 950599 2.91 979132 72 28522 943241 2.94 971763 73 28431 936707 2.95 965138 74 28476 923360 2.99 951836 75 28360 913273 3.01 941633 76 27891 905462 2.99 933353 77 27928 890846 3.04 918774 78 27813 879774 3.06 907587 79 28234 876791 3.12 905025 80 27509 858790 3.10 886299 81 27840 867309 3.11 895149 82 27462 840326 3.16 867788 83 27455 829839 3.20 857294 84 26958 816298 3.20 843256 85 27091 815822 3.21 842913 86 26937 796970 3.27 823907 87 26771 793276 3.26 820047 88 26728 780127 3.31 806855 89 26564 767592 3.34 794156 90 26223 764519 3.32 790742 91 26287 756254 3.36 782541 92 25768 738003 3.37 763771 93 25567 731303 3.38 756870 94 25465 726915 3.38 752380 95 25038 696049 3.47 721087 96 24757 686604 3.48 711361 97 24850 685285 3.50 710135 98 24099 665565 3.49 689664 99 24016 658650 3.52 682666 100 23987 650912 3.55 674899 101 23550 642088 3.54 665638 102 23390 644415 3.50 667805 103 23167 617391 3.62 640558 104 22529 602711 3.60 625240 105 22170 590325 3.62 612495 106 22169 580871 3.68 603040 107 21759 573663 3.65 595422 108 21668 562257 3.71 583925 109 21224 554629 3.69 575853 110 21069 542110 3.74 563179 111 20867 538179 3.73 559046 112 20675 529352 3.76 550027 113 20326 516708 3.78 537034 114 19839 510005 3.74 529844 115 19398 496950 3.76 516348 116 19684 488842 3.87 508526 117 19218 480741 3.84 499959 118 18708 472250 3.81 490958 119 18744 463382 3.89 482126 120 18473 455715 3.90 474188 121 18246 449830 3.90 468076 122 18130 439055 3.97 457185 123 17832 436908 3.92 454740 124 17390 422340 3.95 439730 125 17106 416871 3.94 433977 126 16725 408090 3.94 424815 127 16439 403379 3.92 419818 128 16340 395174 3.97 411514 129 16513 390047 4.06 406560 130 15891 376541 4.05 392432 131 15379 370868 3.98 386247 132 15590 367236 4.07 382826 133 15212 363784 4.01 378996 134 15114 353025 4.11 368139 135 14913 344782 4.15 359695 136 14723 338425 4.17 353148 137 14391 334983 4.12 349374 138 14011 325688 4.12 339699 139 13769 320822 4.12 334591 140 13361 310883 4.12 324244 141 12941 307783 4.03 320724 142 12836 300994 4.09 313830 143 12206 292269 4.01 304475 144 12045 290833 3.98 302878 145 11942 285100 4.02 297042 146 11788 281466 4.02 293254 147 11290 275706 3.93 286996 148 11632 269847 4.13 281479 149 11719 266650 4.21 278369 150 11872 262390 4.33 274262 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 596264 1845341 24.42 2441605 2 515461 2323374 18.16 2838835 3 424520 2215499 16.08 2640019 4 416848 2126537 16.39 2543385 5 246347 2652609 8.50 2898956 6 208904 3015754 6.48 3224658 7 181769 3468283 4.98 3650052 8 200601 3425947 5.53 3626548 9 152827 3301198 4.42 3454025 10 143481 3230297 4.25 3373778 11 154809 3150038 4.68 3304847 12 145172 3150468 4.40 3295640 13 138030 3205388 4.13 3343418 14 131321 3173472 3.97 3304793 15 140165 3153428 4.26 3293593 16 154090 3113081 4.72 3267171 17 132008 3104402 4.08 3236410 18 129576 3119501 3.99 3249077 19 136812 3136917 4.18 3273729 20 131629 3151243 4.01 3282872 21 131974 3093302 4.09 3225276 22 124140 3109253 3.84 3233393 23 128209 3134718 3.93 3262927 24 121016 3112681 3.74 3233697 25 126478 3149901 3.86 3276379 26 121083 3157442 3.69 3278525 27 122199 3150303 3.73 3272502 28 118545 3195770 3.58 3314315 29 121310 3212123 3.64 3333433 30 115274 3198326 3.48 3313600 31 120900 3203550 3.64 3324450 32 117416 3176356 3.56 3293772 33 117871 3179992 3.57 3297863 34 113642 3200904 3.43 3314546 35 116321 3179121 3.53 3295442 36 110994 3184439 3.37 3295433 37 115392 3203896 3.48 3319288 38 112564 3198800 3.40 3311364 39 114900 3192661 3.47 3307561 40 110920 3191280 3.36 3302200 41 114202 3249330 3.40 3363532 42 108846 3199652 3.29 3308498 43 113592 3205548 3.42 3319140 44 109702 3213757 3.30 3323459 45 113222 3220913 3.40 3334135 46 110753 3223396 3.32 3334149 47 113426 3222051 3.40 3335477 48 108817 3183061 3.31 3291878 49 111523 3203639 3.36 3315162 50 110327 3201557 3.33 3311884 51 112054 3187039 3.40 3299093 52 110121 3161191 3.37 3271312 53 112343 3156491 3.44 3268834 54 108501 3128724 3.35 3237225 55 109577 3113267 3.40 3222844 56 108885 3112423 3.38 3221308 57 109472 3085918 3.43 3195390 58 109361 3105947 3.40 3215308 59 111671 3093350 3.48 3205021 60 106801 3037443 3.40 3144244 61 107612 3027001 3.43 3134613 62 106429 3032894 3.39 3139323 63 108065 2963755 3.52 3071820 64 105954 2946397 3.47 3052351 65 108265 2927082 3.57 3035347 66 105432 2910411 3.50 3015843 67 107506 2909376 3.56 3016882 68 104893 2867473 3.53 2972366 69 105481 2865395 3.55 2970876 70 105552 2836576 3.59 2942128 71 105739 2799375 3.64 2905114 72 103751 2769847 3.61 2873598 73 104977 2763812 3.66 2868789 74 102930 2756185 3.60 2859115 75 101982 2702400 3.64 2804382 76 100862 2674015 3.63 2774877 77 102027 2657562 3.70 2759589 78 101091 2649694 3.67 2750785 79 102082 2614022 3.76 2716104 80 99666 2570052 3.73 2669718 81 99266 2544986 3.75 2644252 82 98041 2520564 3.74 2618605 83 98105 2464352 3.83 2562457 84 95452 2424190 3.79 2519642 85 96203 2393362 3.86 2489565 86 95291 2377223 3.85 2472514 87 94936 2339552 3.90 2434488 88 93642 2322555 3.88 2416197 89 93877 2290808 3.94 2384685 90 91699 2237735 3.94 2329434 91 92610 2219409 4.01 2312019 92 91869 2189151 4.03 2281020 93 90514 2156487 4.03 2247001 94 90015 2135443 4.04 2225458 95 89181 2110905 4.05 2200086 96 88291 2094166 4.05 2182457 97 88110 2061828 4.10 2149938 98 86576 2004855 4.14 2091431 99 84581 1968326 4.12 2052907 100 84131 1941972 4.15 2026103 101 83291 1916909 4.16 2000200 102 82269 1897511 4.16 1979780 103 82309 1883641 4.19 1965950 104 80615 1845329 4.19 1925944 105 80190 1823280 4.21 1903470 106 78516 1776809 4.23 1855325 107 78643 1742610 4.32 1821253 108 76244 1722559 4.24 1798803 109 76298 1684754 4.33 1761052 110 74562 1663896 4.29 1738458 111 74790 1648758 4.34 1723548 112 73266 1612160 4.35 1685426 113 72904 1575985 4.42 1648889 114 71347 1556384 4.38 1627731 115 71102 1527796 4.45 1598898 116 69285 1500306 4.41 1569591 117 68245 1472101 4.43 1540346 118 67835 1446188 4.48 1514023 119 67059 1420750 4.51 1487809 120 65807 1394184 4.51 1459991 121 64911 1366326 4.54 1431237 122 64148 1340775 4.57 1404923 123 62712 1314420 4.55 1377132 124 61999 1293305 4.57 1355304 125 61432 1272402 4.61 1333834 126 60098 1243434 4.61 1303532 127 59294 1224665 4.62 1283959 128 57786 1199363 4.60 1257149 129 56823 1181135 4.59 1237958 130 56345 1160838 4.63 1217183 131 56043 1139578 4.69 1195621 132 54198 1112520 4.65 1166718 133 53614 1092840 4.68 1146454 134 52786 1069886 4.70 1122672 135 51813 1049464 4.70 1101277 136 51024 1031950 4.71 1082974 137 50379 1014032 4.73 1064411 138 49323 995451 4.72 1044774 139 48264 975609 4.71 1023873 140 47538 954305 4.75 1001843 141 46371 932928 4.74 979299 142 46020 916307 4.78 962327 143 44380 900579 4.70 944959 144 43483 885501 4.68 928984 145 43466 871902 4.75 915368 146 42055 857440 4.68 899495 147 41522 847439 4.67 888961 148 42128 834231 4.81 876359 149 42148 821218 4.88 863366 150 40940 804274 4.84 845214 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 38304 112131 25.46 150435 2 36327 152732 19.21 189059 3 28630 206108 12.20 234738 4 31229 160505 16.29 191734 5 27121 182479 12.94 209600 6 21465 130715 14.11 152180 7 20324 121054 14.38 141378 8 23630 124272 15.98 147902 9 23050 123122 15.77 146172 10 24065 117878 16.95 141943 11 30013 119653 20.05 149666 12 42735 118764 26.46 161499 13 36701 115939 24.04 152640 14 24707 114160 17.79 138867 15 24512 112429 17.90 136941 16 24757 111034 18.23 135791 17 25290 114167 18.13 139457 18 23430 108822 17.72 132252 19 22943 105617 17.85 128560 20 22995 104400 18.05 127395 21 22959 104422 18.02 127381 22 22723 101969 18.22 124692 23 21395 98557 17.84 119952 24 21676 98077 18.10 119753 25 21839 96875 18.40 118714 26 20882 93746 18.22 114628 27 20583 93125 18.10 113708 28 20428 89185 18.64 109613 29 19764 87355 18.45 107119 30 19057 85894 18.16 104951 31 18559 84446 18.02 103005 32 18245 82383 18.13 100628 33 17862 81323 18.01 99185 34 17663 80023 18.08 97686 35 17304 78652 18.03 95956 36 16912 79163 17.60 96075 37 16726 75041 18.23 91767 38 16476 73634 18.28 90110 39 15939 72399 18.04 88338 40 15617 69913 18.26 85530 41 15773 68565 18.70 84338 42 15372 67880 18.46 83252 43 14987 65979 18.51 80966 44 14899 65282 18.58 80181 45 14327 63591 18.39 77918 46 14051 62020 18.47 76071 47 13733 61190 18.33 74923 48 13559 59932 18.45 73491 49 13201 57857 18.58 71058 50 13156 57044 18.74 70200 51 12390 56313 18.03 68703 52 12165 54455 18.26 66620 53 11941 52684 18.48 64625 54 11697 51894 18.39 63591 55 11507 51036 18.40 62543 56 11496 49611 18.81 61107 57 11377 49727 18.62 61104 58 11112 48457 18.65 59569 59 10587 46634 18.50 57221 60 10385 46124 18.38 56509 61 10210 44156 18.78 54366 62 10018 43295 18.79 53313 63 9663 42883 18.39 52546 64 9671 41557 18.88 51228 65 9644 40962 19.06 50606 66 9274 40826 18.51 50100 67 9124 39728 18.68 48852 68 8691 38796 18.30 47487 69 8739 38070 18.67 46809 70 8553 36851 18.84 45404 71 8399 35911 18.96 44310 72 8214 35757 18.68 43971 73 7956 34597 18.70 42553 74 7855 33657 18.92 41512 75 7738 33301 18.86 41039 76 7569 32405 18.93 39974 77 7442 31857 18.94 39299 78 7202 30846 18.93 38048 79 7114 29973 19.18 37087 80 6759 29687 18.55 36446 81 6927 29490 19.02 36417 82 6698 28873 18.83 35571 83 6717 27963 19.37 34680 84 6501 27968 18.86 34469 85 6166 26708 18.76 32874 86 5936 26213 18.46 32149 87 5984 25486 19.01 31470 88 6092 25594 19.23 31686 89 5913 24993 19.13 30906 90 5602 24678 18.50 30280 91 5746 23900 19.38 29646 92 5446 23022 19.13 28468 93 5428 23280 18.91 28708 94 5218 21720 19.37 26938 95 4858 21388 18.51 26246 96 4861 21344 18.55 26205 97 4731 20399 18.83 25130 98 4613 20149 18.63 24762 99 4483 19613 18.60 24096 100 4491 18978 19.14 23469 101 4451 19144 18.86 23595 102 4307 18998 18.48 23305 103 4128 18409 18.32 22537 104 4243 17588 19.44 21831 105 4126 17690 18.91 21816 106 4005 17067 19.01 21072 107 3832 16769 18.60 20601 108 3863 16437 19.03 20300 109 3814 16050 19.20 19864 110 3636 15634 18.87 19270 111 3653 15372 19.20 19025 112 3499 14664 19.26 18163 113 3448 14606 19.10 18054 114 3606 14492 19.92 18098 115 3318 14124 19.02 17442 116 3170 13936 18.53 17106 117 3201 13888 18.73 17089 118 3112 13071 19.23 16183 119 3142 13199 19.23 16341 120 3012 12765 19.09 15777 121 2887 12267 19.05 15154 122 2911 12063 19.44 14974 123 2744 11961 18.66 14705 124 2787 11656 19.30 14443 125 2856 11531 19.85 14387 126 2665 11105 19.35 13770 127 2597 10867 19.29 13464 128 2491 10504 19.17 12995 129 2347 10301 18.56 12648 130 2250 10010 18.35 12260 131 2342 9965 19.03 12307 132 2244 9690 18.80 11934 133 2279 9413 19.49 11692 134 2106 9242 18.56 11348 135 2168 9206 19.06 11374 136 2148 8784 19.65 10932 137 2014 8793 18.64 10807 138 2010 8763 18.66 10773 139 2009 8680 18.80 10689 140 2117 8367 20.19 10484 141 1809 8086 18.28 9895 142 1825 7829 18.90 9654 143 1790 7666 18.93 9456 144 1721 7472 18.72 9193 145 1730 7358 19.04 9088 146 1703 7318 18.88 9021 147 1760 7626 18.75 9386 148 1617 7075 18.60 8692 149 1518 6802 18.25 8320 150 1576 6744 18.94 8320 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 62708 407715 13.33 470423 2 38961 199788 16.32 238749 3 34105 231710 12.83 265815 4 31310 203791 13.32 235101 5 18232 259685 6.56 277917 6 11858 308254 3.70 320112 7 9287 214322 4.15 223609 8 10424 205028 4.84 215452 9 8905 207861 4.11 216766 10 12722 197331 6.06 210053 11 25244 190490 11.70 215734 12 9637 197247 4.66 206884 13 9889 199761 4.72 209650 14 6899 200124 3.33 207023 15 7734 185851 4.00 193585 16 9588 181780 5.01 191368 17 6809 185530 3.54 192339 18 7667 194933 3.78 202600 19 6648 171975 3.72 178623 20 6662 173315 3.70 179977 21 6435 167901 3.69 174336 22 5937 169007 3.39 174944 23 5717 165725 3.33 171442 24 5561 159234 3.37 164795 25 5551 159303 3.37 164854 26 5228 155223 3.26 160451 27 5197 153559 3.27 158756 28 5191 151430 3.31 156621 29 4749 148464 3.10 153213 30 4785 145266 3.19 150051 31 4511 140418 3.11 144929 32 4433 135238 3.17 139671 33 4324 137055 3.06 141379 34 4232 133061 3.08 137293 35 4251 130809 3.15 135060 36 3978 127398 3.03 131376 37 4038 127555 3.07 131593 38 3978 122339 3.15 126317 39 3820 124490 2.98 128310 40 3775 116946 3.13 120721 41 3796 117010 3.14 120806 42 3653 112953 3.13 116606 43 3592 111779 3.11 115371 44 3382 107011 3.06 110393 45 3534 106110 3.22 109644 46 3273 102551 3.09 105824 47 3332 99887 3.23 103219 48 3206 99218 3.13 102424 49 3306 98232 3.26 101538 50 3208 94957 3.27 98165 51 3172 93239 3.29 96411 52 3071 91032 3.26 94103 53 3035 89004 3.30 92039 54 2953 86331 3.31 89284 55 2939 86115 3.30 89054 56 2830 83351 3.28 86181 57 2899 81873 3.42 84772 58 2681 79230 3.27 81911 59 2655 77899 3.30 80554 60 2602 77517 3.25 80119 61 2687 76085 3.41 78772 62 2612 74438 3.39 77050 63 2540 72101 3.40 74641 64 2481 70084 3.42 72565 65 2478 69496 3.44 71974 66 2375 68115 3.37 70490 67 2416 67568 3.45 69984 68 2386 64701 3.56 67087 69 2308 64215 3.47 66523 70 2267 63527 3.45 65794 71 2243 61892 3.50 64135 72 2283 60823 3.62 63106 73 2178 59153 3.55 61331 74 2098 57707 3.51 59805 75 2025 56402 3.47 58427 76 2030 55096 3.55 57126 77 2056 53993 3.67 56049 78 1989 52479 3.65 54468 79 1922 52065 3.56 53987 80 1861 50250 3.57 52111 81 1897 51114 3.58 53011 82 1723 48132 3.46 49855 83 1874 47842 3.77 49716 84 1732 46280 3.61 48012 85 1698 45860 3.57 47558 86 1742 44455 3.77 46197 87 1663 43365 3.69 45028 88 1721 43030 3.85 44751 89 1614 41968 3.70 43582 90 1724 41890 3.95 43614 91 1634 40707 3.86 42341 92 1609 39727 3.89 41336 93 1513 39587 3.68 41100 94 1532 39073 3.77 40605 95 1433 36787 3.75 38220 96 1422 35633 3.84 37055 97 1443 35780 3.88 37223 98 1342 34227 3.77 35569 99 1423 33638 4.06 35061 100 1320 33230 3.82 34550 101 1305 32784 3.83 34089 102 1369 33522 3.92 34891 103 1274 30921 3.96 32195 104 1240 30399 3.92 31639 105 1142 29270 3.76 30412 106 1202 28381 4.06 29583 107 1202 28196 4.09 29398 108 1105 27558 3.86 28663 109 1115 26910 3.98 28025 110 1086 25976 4.01 27062 111 1100 25989 4.06 27089 112 1053 25602 3.95 26655 113 1057 24594 4.12 25651 114 1039 24586 4.05 25625 115 1021 23409 4.18 24430 116 972 23149 4.03 24121 117 932 22965 3.90 23897 118 939 22602 3.99 23541 119 908 21826 3.99 22734 120 933 21310 4.19 22243 121 855 21134 3.89 21989 122 816 20283 3.87 21099 123 852 20151 4.06 21003 124 826 19851 3.99 20677 125 849 19710 4.13 20559 126 797 18846 4.06 19643 127 814 18877 4.13 19691 128 768 18487 3.99 19255 129 764 17939 4.08 18703 130 806 17530 4.40 18336 131 702 16860 4.00 17562 132 751 16769 4.29 17520 133 723 16515 4.19 17238 134 708 15929 4.26 16637 135 681 15774 4.14 16455 136 679 15409 4.22 16088 137 668 15302 4.18 15970 138 705 14671 4.59 15376 139 656 14653 4.29 15309 140 622 14105 4.22 14727 141 616 13770 4.28 14386 142 633 13663 4.43 14296 143 573 13142 4.18 13715 144 577 13114 4.21 13691 145 603 12832 4.49 13435 146 575 12852 4.28 13427 147 556 12397 4.29 12953 148 570 12070 4.51 12640 149 527 11982 4.21 12509 150 566 11593 4.65 12159 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 141399 471386 23.07 612785 2 127007 571632 18.18 698639 3 103390 521723 16.54 625113 4 102789 493067 17.25 595856 5 72402 584319 11.02 656721 6 63904 648935 8.96 712839 7 47684 744690 6.02 792374 8 61129 712479 7.90 773608 9 36413 685395 5.04 721808 10 34505 657782 4.98 692287 11 39300 614573 6.01 653873 12 37086 604970 5.78 642056 13 31668 611824 4.92 643492 14 29560 600014 4.70 629574 15 33465 593414 5.34 626879 16 43167 563283 7.12 606450 17 28800 563292 4.86 592092 18 28829 551696 4.97 580525 19 29873 550214 5.15 580087 20 28529 539844 5.02 568373 21 27860 517698 5.11 545558 22 25204 512326 4.69 537530 23 25027 510195 4.68 535222 24 23359 499118 4.47 522477 25 23340 494881 4.50 518221 26 22111 486153 4.35 508264 27 21580 476875 4.33 498455 28 20700 473552 4.19 494252 29 20560 465618 4.23 486178 30 19342 458077 4.05 477419 31 19576 450347 4.17 469923 32 18919 436661 4.15 455580 33 18315 430928 4.08 449243 34 17709 420830 4.04 438539 35 17515 409581 4.10 427096 36 16542 402593 3.95 419135 37 16830 399297 4.04 416127 38 16522 389326 4.07 405848 39 16075 383154 4.03 399229 40 15498 374223 3.98 389721 41 15730 373640 4.04 389370 42 14780 362314 3.92 377094 43 15020 355569 4.05 370589 44 14541 349008 4.00 363549 45 14441 345800 4.01 360241 46 14158 337320 4.03 351478 47 14150 330346 4.11 344496 48 13356 321357 3.99 334713 49 13589 316406 4.12 329995 50 13355 311086 4.12 324441 51 13102 306739 4.10 319841 52 12694 297216 4.10 309910 53 12759 293760 4.16 306519 54 12276 286277 4.11 298553 55 12045 280169 4.12 292214 56 11886 275869 4.13 287755 57 11785 268502 4.20 280287 58 11627 267229 4.17 278856 59 11733 262693 4.28 274426 60 11040 253878 4.17 264918 61 11005 249035 4.23 260040 62 10763 247481 4.17 258244 63 10655 236977 4.30 247632 64 10613 232626 4.36 243239 65 10555 228627 4.41 239182 66 9974 224359 4.26 234333 67 10240 223558 4.38 233798 68 9913 216264 4.38 226177 69 9825 214259 4.38 224084 70 9575 208437 4.39 218012 71 9595 203357 4.51 212952 72 9239 199800 4.42 209039 73 9134 197850 4.41 206984 74 9064 195410 4.43 204474 75 8972 189093 4.53 198065 76 8668 184837 4.48 193505 77 8332 182602 4.36 190934 78 8352 181832 4.39 190184 79 8332 178012 4.47 186344 80 8130 171893 4.52 180023 81 8057 169449 4.54 177506 82 7811 166645 4.48 174456 83 8023 160419 4.76 168442 84 7415 157701 4.49 165116 85 7410 153906 4.59 161316 86 7260 152300 4.55 159560 87 7238 148125 4.66 155363 88 6920 146370 4.51 153290 89 7015 143992 4.65 151007 90 6667 139258 4.57 145925 91 6702 136594 4.68 143296 92 6655 134354 4.72 141009 93 6270 131529 4.55 137799 94 6288 130327 4.60 136615 95 6315 128112 4.70 134427 96 6021 126915 4.53 132936 97 6184 124606 4.73 130790 98 5946 119047 4.76 124993 99 5774 115613 4.76 121387 100 5717 113807 4.78 119524 101 5623 111759 4.79 117382 102 5256 110161 4.55 115417 103 5411 109741 4.70 115152 104 5309 105822 4.78 111131 105 5192 105840 4.68 111032 106 5143 101502 4.82 106645 107 5108 98679 4.92 103787 108 4883 97635 4.76 102518 109 4959 94572 4.98 99531 110 4750 92892 4.86 97642 111 4755 92643 4.88 97398 112 4617 89329 4.91 93946 113 4587 87214 5.00 91801 114 4359 85798 4.83 90157 115 4444 83445 5.06 87889 116 4259 81810 4.95 86069 117 4175 80142 4.95 84317 118 4155 78151 5.05 82306 119 4033 76763 4.99 80796 120 3907 74760 4.97 78667 121 3927 73273 5.09 77200 122 3894 71279 5.18 75173 123 3627 69855 4.94 73482 124 3755 68368 5.21 72123 125 3620 67261 5.11 70881 126 3496 65808 5.04 69304 127 3498 64489 5.15 67987 128 3393 63415 5.08 66808 129 3342 62152 5.10 65494 130 3310 61196 5.13 64506 131 3279 60094 5.17 63373 132 2961 58394 4.83 61355 133 3173 56655 5.30 59828 134 2997 55504 5.12 58501 135 3046 53962 5.34 57008 136 2916 53254 5.19 56170 137 2978 52254 5.39 55232 138 2810 51319 5.19 54129 139 2799 50297 5.27 53096 140 2779 48869 5.38 51648 141 2529 47637 5.04 50166 142 2647 46757 5.36 49404 143 2561 45998 5.27 48559 144 2510 45062 5.28 47572 145 2546 43844 5.49 46390 146 2487 43698 5.38 46185 147 2372 43113 5.21 45485 148 2378 42204 5.33 44582 149 2357 41426 5.38 43783 150 2297 40403 5.38 42700