CF03-CM03-Zygote_R1_001.fastp-trim.20220827_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 23733886 lines in total Total number of methylation call strings processed: 47467772 Final Cytosine Methylation Report ================================= Total number of C's analysed: 351736841 Total methylated C's in CpG context: 9242725 Total methylated C's in CHG context: 2164584 Total methylated C's in CHH context: 12267849 Total C to T conversions in CpG context: 36217436 Total C to T conversions in CHG context: 66972881 Total C to T conversions in CHH context: 224871366 C methylated in CpG context: 20.3% C methylated in CHG context: 3.1% C methylated in CHH context: 5.2%