CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 114481 269507 29.81 383988 2 127812 411910 23.68 539722 3 91400 535989 14.57 627389 4 80771 429120 15.84 509891 5 87218 484416 15.26 571634 6 64063 357308 15.20 421371 7 67568 329409 17.02 396977 8 81403 359119 18.48 440522 9 86204 358859 19.37 445063 10 84156 350590 19.36 434746 11 93617 353743 20.93 447360 12 103214 355661 22.49 458875 13 96519 358250 21.22 454769 14 91929 354714 20.58 446643 15 92439 352641 20.77 445080 16 92094 352523 20.71 444617 17 95003 358630 20.94 453633 18 90925 359925 20.17 450850 19 91864 352622 20.67 444486 20 95443 363598 20.79 459041 21 98753 368880 21.12 467633 22 98627 365848 21.23 464475 23 97791 369986 20.91 467777 24 97699 373010 20.76 470709 25 98304 369228 21.03 467532 26 97595 363047 21.19 460642 27 96601 364487 20.95 461088 28 96357 363325 20.96 459682 29 96440 361948 21.04 458388 30 96186 364911 20.86 461097 31 97092 367181 20.91 464273 32 97229 364283 21.07 461512 33 96136 364334 20.88 460470 34 97094 363217 21.09 460311 35 97314 362982 21.14 460296 36 96988 366037 20.95 463025 37 96311 360631 21.08 456942 38 95885 361191 20.98 457076 39 94597 361388 20.75 455985 40 94624 356635 20.97 451259 41 95157 353352 21.22 448509 42 94304 354810 21.00 449114 43 93524 353139 20.94 446663 44 95607 354368 21.25 449975 45 92523 351955 20.82 444478 46 92212 347672 20.96 439884 47 91875 344919 21.03 436794 48 92454 345966 21.09 438420 49 91113 339638 21.15 430751 50 90518 338258 21.11 428776 51 88326 337904 20.72 426230 52 86608 331499 20.71 418107 53 87065 328121 20.97 415186 54 85813 326816 20.80 412629 55 85215 322867 20.88 408082 56 85292 318708 21.11 404000 57 84464 318974 20.94 403438 58 82755 316373 20.73 399128 59 81436 312022 20.70 393458 60 79784 309064 20.52 388848 61 78855 300935 20.76 379790 62 77950 301091 20.57 379041 63 76619 296031 20.56 372650 64 76577 292995 20.72 369572 65 75382 288305 20.73 363687 66 74691 287423 20.63 362114 67 74647 282884 20.88 357531 68 72181 278524 20.58 350705 69 70759 273555 20.55 344314 70 69545 267539 20.63 337084 71 68554 263714 20.63 332268 72 67551 261023 20.56 328574 73 65581 255639 20.42 321220 74 64837 250197 20.58 315034 75 63696 248282 20.42 311978 76 62419 242128 20.50 304547 77 61275 236756 20.56 298031 78 59939 232237 20.51 292176 79 58974 229224 20.46 288198 80 57671 224789 20.42 282460 81 56652 220947 20.41 277599 82 55770 215312 20.57 271082 83 54644 211915 20.50 266559 84 52959 208870 20.23 261829 85 52048 203402 20.38 255450 86 50647 199878 20.22 250525 87 49894 196029 20.29 245923 88 49390 192565 20.41 241955 89 47958 190380 20.12 238338 90 47184 186856 20.16 234040 91 46340 180859 20.40 227199 92 44981 176728 20.29 221709 93 44368 173440 20.37 217808 94 42554 168067 20.20 210621 95 41703 164374 20.24 206077 96 40519 162635 19.94 203154 97 39491 158448 19.95 197939 98 38909 154375 20.13 193284 99 38170 151121 20.16 189291 100 37114 148198 20.03 185312 101 36225 144716 20.02 180941 102 35413 142162 19.94 177575 103 34498 137605 20.04 172103 104 33668 135190 19.94 168858 105 32845 131101 20.03 163946 106 32212 128790 20.01 161002 107 30797 125165 19.75 155962 108 30206 122697 19.76 152903 109 29560 119071 19.89 148631 110 28943 116984 19.83 145927 111 28353 114484 19.85 142837 112 27382 110490 19.86 137872 113 26955 108919 19.84 135874 114 26355 107088 19.75 133443 115 25755 103852 19.87 129607 116 24873 101336 19.71 126209 117 24363 100133 19.57 124496 118 23962 96913 19.82 120875 119 22980 94945 19.49 117925 120 22710 91976 19.80 114686 121 22027 90465 19.58 112492 122 21603 87864 19.73 109467 123 20940 85664 19.64 106604 124 20576 83846 19.70 104422 125 20260 82209 19.77 102469 126 19374 79712 19.55 99086 127 18690 78404 19.25 97094 128 18198 75246 19.47 93444 129 17548 73480 19.28 91028 130 17504 71937 19.57 89441 131 16978 70151 19.49 87129 132 16351 68370 19.30 84721 133 15806 65963 19.33 81769 134 15590 64597 19.44 80187 135 15283 63120 19.49 78403 136 14875 61429 19.49 76304 137 14486 59954 19.46 74440 138 14210 58598 19.52 72808 139 13936 57863 19.41 71799 140 13583 55945 19.54 69528 141 12928 54021 19.31 66949 142 12429 53169 18.95 65598 143 12446 51648 19.42 64094 144 11829 50328 19.03 62157 145 11921 48835 19.62 60756 146 11640 49126 19.16 60766 147 11482 47806 19.37 59288 148 11025 46392 19.20 57417 149 10424 44716 18.90 55140 150 10034 43565 18.72 53599 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 174612 1385132 11.19 1559744 2 109849 472269 18.87 582118 3 83432 674728 11.00 758160 4 54379 597013 8.35 651392 5 26618 791667 3.25 818285 6 20959 889229 2.30 910188 7 17973 649686 2.69 667659 8 18098 653378 2.70 671476 9 18085 665432 2.65 683517 10 19367 639692 2.94 659059 11 26409 638063 3.97 664472 12 17245 662427 2.54 679672 13 16895 671717 2.45 688612 14 15178 657332 2.26 672510 15 15842 650400 2.38 666242 16 16998 643856 2.57 660854 17 15152 669512 2.21 684664 18 14949 674589 2.17 689538 19 14787 660151 2.19 674938 20 14678 665808 2.16 680486 21 15193 673757 2.21 688950 22 14798 678897 2.13 693695 23 14788 677799 2.14 692587 24 14432 665531 2.12 679963 25 14797 676464 2.14 691261 26 14379 656957 2.14 671336 27 14348 661222 2.12 675570 28 14225 667961 2.09 682186 29 14269 669098 2.09 683367 30 14482 669269 2.12 683751 31 14839 673516 2.16 688355 32 14496 662907 2.14 677403 33 15072 681475 2.16 696547 34 14842 667997 2.17 682839 35 14922 664862 2.20 679784 36 14744 662326 2.18 677070 37 15171 678699 2.19 693870 38 15035 662456 2.22 677491 39 15338 666045 2.25 681383 40 14920 660195 2.21 675115 41 14959 662367 2.21 677326 42 14944 655834 2.23 670778 43 15135 659883 2.24 675018 44 14999 646901 2.27 661900 45 15296 658115 2.27 673411 46 15325 644114 2.32 659439 47 15356 639146 2.35 654502 48 15187 635259 2.33 650446 49 15603 639264 2.38 654867 50 15485 629033 2.40 644518 51 15391 627243 2.39 642634 52 15280 618525 2.41 633805 53 15473 619100 2.44 634573 54 15118 606211 2.43 621329 55 15226 608329 2.44 623555 56 15292 597250 2.50 612542 57 15540 599266 2.53 614806 58 15407 584009 2.57 599416 59 15286 579760 2.57 595046 60 15288 571909 2.60 587197 61 15108 573217 2.57 588325 62 14796 558389 2.58 573185 63 15082 556173 2.64 571255 64 14783 545382 2.64 560165 65 14951 542235 2.68 557186 66 14863 533135 2.71 547998 67 14525 531566 2.66 546091 68 14213 516042 2.68 530255 69 14370 512780 2.73 527150 70 14066 503691 2.72 517757 71 13779 493123 2.72 506902 72 13747 485092 2.76 498839 73 13759 480329 2.78 494088 74 13257 468262 2.75 481519 75 13433 463002 2.82 476435 76 13273 453316 2.84 466589 77 13004 443709 2.85 456713 78 12473 435639 2.78 448112 79 12660 430184 2.86 442844 80 12443 417743 2.89 430186 81 12401 412145 2.92 424546 82 12214 403263 2.94 415477 83 11901 393985 2.93 405886 84 11626 384716 2.93 396342 85 11442 381332 2.91 392774 86 11171 369722 2.93 380893 87 11326 364032 3.02 375358 88 10899 356881 2.96 367780 89 10910 349471 3.03 360381 90 10598 341887 3.01 352485 91 10480 335623 3.03 346103 92 10223 327158 3.03 337381 93 10026 322167 3.02 332193 94 9980 318044 3.04 328024 95 9657 304560 3.07 314217 96 9403 297596 3.06 306999 97 9229 291655 3.07 300884 98 9019 282545 3.09 291564 99 8940 278294 3.11 287234 100 8664 271842 3.09 280506 101 8614 267354 3.12 275968 102 8405 262927 3.10 271332 103 8239 253128 3.15 261367 104 7939 244721 3.14 252660 105 7794 238939 3.16 246733 106 7577 233874 3.14 241451 107 7379 228028 3.13 235407 108 7392 223249 3.20 230641 109 7149 217224 3.19 224373 110 6979 211171 3.20 218150 111 6844 207817 3.19 214661 112 6780 202491 3.24 209271 113 6645 197358 3.26 204003 114 6392 192465 3.21 198857 115 6245 188103 3.21 194348 116 6150 182053 3.27 188203 117 5914 179065 3.20 184979 118 5947 174734 3.29 180681 119 5767 169272 3.29 175039 120 5502 165713 3.21 171215 121 5597 161099 3.36 166696 122 5389 157578 3.31 162967 123 5269 153420 3.32 158689 124 5075 149629 3.28 154704 125 5024 145405 3.34 150429 126 4951 143223 3.34 148174 127 4689 139293 3.26 143982 128 4674 135906 3.32 140580 129 4547 132579 3.32 137126 130 4413 128508 3.32 132921 131 4276 124994 3.31 129270 132 4203 121607 3.34 125810 133 4142 119637 3.35 123779 134 4160 115592 3.47 119752 135 3918 112487 3.37 116405 136 3961 110548 3.46 114509 137 3790 107546 3.40 111336 138 3643 104466 3.37 108109 139 3568 101248 3.40 104816 140 3638 98217 3.57 101855 141 3381 95760 3.41 99141 142 3402 92879 3.53 96281 143 3358 90786 3.57 94144 144 3158 88495 3.45 91653 145 3104 86961 3.45 90065 146 3095 84857 3.52 87952 147 3111 82463 3.64 85574 148 3042 80569 3.64 83611 149 3158 78950 3.85 82108 150 3170 76442 3.98 79612 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 505230 1388375 26.68 1893605 2 429242 1804841 19.21 2234083 3 348272 1736114 16.71 2084386 4 287514 1732015 14.24 2019529 5 187578 2048196 8.39 2235774 6 153177 2236621 6.41 2389798 7 163309 2511784 6.10 2675093 8 148023 2519922 5.55 2667945 9 149603 2346683 5.99 2496286 10 130017 2303564 5.34 2433581 11 153177 2258380 6.35 2411557 12 131321 2271902 5.46 2403223 13 141525 2288924 5.82 2430449 14 127468 2287815 5.28 2415283 15 146014 2273171 6.04 2419185 16 133177 2246854 5.60 2380031 17 139330 2218170 5.91 2357500 18 124894 2225827 5.31 2350721 19 143708 2217039 6.09 2360747 20 129141 2246708 5.44 2375849 21 140152 2205221 5.98 2345373 22 126727 2221248 5.40 2347975 23 142030 2219586 6.01 2361616 24 123937 2214522 5.30 2338459 25 137548 2229262 5.81 2366810 26 124473 2238209 5.27 2362682 27 136729 2244313 5.74 2381042 28 122197 2282939 5.08 2405136 29 135315 2276788 5.61 2412103 30 122723 2290115 5.09 2412838 31 136486 2279209 5.65 2415695 32 122118 2270767 5.10 2392885 33 131042 2267038 5.46 2398080 34 118951 2267868 4.98 2386819 35 129602 2256901 5.43 2386503 36 115260 2264786 4.84 2380046 37 125059 2270492 5.22 2395551 38 113547 2269666 4.76 2383213 39 122839 2246904 5.18 2369743 40 110082 2250580 4.66 2360662 41 118517 2262143 4.98 2380660 42 107258 2247505 4.55 2354763 43 116075 2236253 4.93 2352328 44 106488 2239750 4.54 2346238 45 111700 2230216 4.77 2341916 46 103600 2222156 4.45 2325756 47 111609 2208181 4.81 2319790 48 100187 2190701 4.37 2290888 49 106391 2181896 4.65 2288287 50 98936 2177465 4.35 2276401 51 104518 2160612 4.61 2265130 52 95536 2139341 4.27 2234877 53 99439 2123785 4.47 2223224 54 93147 2103005 4.24 2196152 55 96031 2077196 4.42 2173227 56 90332 2071297 4.18 2161629 57 91427 2039583 4.29 2131010 58 87912 2031360 4.15 2119272 59 90880 2005316 4.34 2096196 60 83355 1966182 4.07 2049537 61 84773 1938356 4.19 2023129 62 81104 1930988 4.03 2012092 63 81533 1884230 4.15 1965763 64 76956 1859180 3.97 1936136 65 77594 1834827 4.06 1912421 66 74018 1812613 3.92 1886631 67 75268 1798235 4.02 1873503 68 70834 1764382 3.86 1835216 69 70565 1748110 3.88 1818675 70 67828 1716342 3.80 1784170 71 68706 1679815 3.93 1748521 72 64665 1655343 3.76 1720008 73 64543 1634339 3.80 1698882 74 61935 1616724 3.69 1678659 75 61741 1576310 3.77 1638051 76 58793 1543615 3.67 1602408 77 58681 1522908 3.71 1581589 78 56779 1508783 3.63 1565562 79 56882 1477873 3.71 1534755 80 54234 1436220 3.64 1490454 81 53035 1410315 3.62 1463350 82 51599 1390162 3.58 1441761 83 51688 1352739 3.68 1404427 84 48673 1324239 3.55 1372912 85 48230 1296187 3.59 1344417 86 46576 1274083 3.53 1320659 87 46895 1247434 3.62 1294329 88 45298 1228941 3.55 1274239 89 44741 1203321 3.58 1248062 90 43120 1170114 3.55 1213234 91 42947 1145362 3.61 1188309 92 41605 1122021 3.58 1163626 93 40367 1099326 3.54 1139693 94 39561 1078407 3.54 1117968 95 39374 1054382 3.60 1093756 96 37857 1038170 3.52 1076027 97 37276 1013816 3.55 1051092 98 36229 983884 3.55 1020113 99 35629 959715 3.58 995344 100 34265 938765 3.52 973030 101 33709 920549 3.53 954258 102 33064 904497 3.53 937561 103 32229 883843 3.52 916072 104 31508 860590 3.53 892098 105 30724 846133 3.50 876857 106 30488 818775 3.59 849263 107 29838 800336 3.59 830174 108 29137 782188 3.59 811325 109 28027 760040 3.56 788067 110 27593 741702 3.59 769295 111 27348 733010 3.60 760358 112 26415 708862 3.59 735277 113 25785 692057 3.59 717842 114 25486 674041 3.64 699527 115 24712 658483 3.62 683195 116 24224 640394 3.64 664618 117 23296 626513 3.59 649809 118 23046 610052 3.64 633098 119 22741 595093 3.68 617834 120 21780 580170 3.62 601950 121 21338 565816 3.63 587154 122 21155 552932 3.68 574087 123 20286 537941 3.63 558227 124 19777 522823 3.64 542600 125 19640 509982 3.71 529622 126 18753 497859 3.63 516612 127 18389 484254 3.66 502643 128 17622 471798 3.60 489420 129 17514 460777 3.66 478291 130 16977 448711 3.65 465688 131 16682 439849 3.65 456531 132 15987 427483 3.60 443470 133 15801 416129 3.66 431930 134 15776 405615 3.74 421391 135 15399 396889 3.74 412288 136 14507 385799 3.62 400306 137 14459 376875 3.69 391334 138 14150 367351 3.71 381501 139 13583 357860 3.66 371443 140 13399 346566 3.72 359965 141 12826 337152 3.66 349978 142 12751 328189 3.74 340940 143 12604 320762 3.78 333366 144 12163 314437 3.72 326600 145 12197 307627 3.81 319824 146 11891 300355 3.81 312246 147 11685 294331 3.82 306016 148 11706 287729 3.91 299435 149 11988 281353 4.09 293341 150 11794 271639 4.16 283433 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 10951 32209 25.37 43160 2 11887 49085 19.50 60972 3 8560 64269 11.75 72829 4 8012 48338 14.22 56350 5 8007 54956 12.72 62963 6 5943 37820 13.58 43763 7 5901 34173 14.73 40074 8 6702 34579 16.24 41281 9 6896 33296 17.16 40192 10 6596 32137 17.03 38733 11 7580 31548 19.37 39128 12 8871 30990 22.25 39861 13 7489 30412 19.76 37901 14 6549 28396 18.74 34945 15 6640 27369 19.52 34009 16 6474 27071 19.30 33545 17 6986 28073 19.93 35059 18 6044 25933 18.90 31977 19 6007 24667 19.58 30674 20 5929 24792 19.30 30721 21 5876 24565 19.30 30441 22 5574 23184 19.38 28758 23 5516 23158 19.24 28674 24 5270 22668 18.86 27938 25 5320 22169 19.35 27489 26 5063 21083 19.36 26146 27 4940 20446 19.46 25386 28 4834 20312 19.22 25146 29 4659 19566 19.23 24225 30 4522 18924 19.29 23446 31 4256 18390 18.79 22646 32 4383 17663 19.88 22046 33 4117 17352 19.18 21469 34 4148 16966 19.65 21114 35 3995 16411 19.58 20406 36 3853 16061 19.35 19914 37 3784 15758 19.36 19542 38 3659 15311 19.29 18970 39 3519 14522 19.51 18041 40 3370 13996 19.41 17366 41 3366 13400 20.08 16766 42 3176 13258 19.33 16434 43 3173 13192 19.39 16365 44 3211 12656 20.24 15867 45 2988 12260 19.60 15248 46 2822 11750 19.37 14572 47 2873 11492 20.00 14365 48 2655 11187 19.18 13842 49 2759 10622 20.62 13381 50 2635 10837 19.56 13472 51 2446 10403 19.04 12849 52 2437 9773 19.96 12210 53 2342 9491 19.79 11833 54 2241 9334 19.36 11575 55 2198 9060 19.52 11258 56 2179 8563 20.28 10742 57 2137 8768 19.60 10905 58 2036 8482 19.36 10518 59 2054 8251 19.93 10305 60 1941 7850 19.82 9791 61 1889 7614 19.88 9503 62 1789 7352 19.57 9141 63 1768 7020 20.12 8788 64 1695 6963 19.58 8658 65 1596 6616 19.43 8212 66 1608 6679 19.40 8287 67 1587 6541 19.53 8128 68 1511 6295 19.36 7806 69 1446 5914 19.65 7360 70 1446 5883 19.73 7329 71 1456 5596 20.65 7052 72 1333 5647 19.10 6980 73 1343 5474 19.70 6817 74 1277 5010 20.31 6287 75 1289 5067 20.28 6356 76 1141 4907 18.87 6048 77 1127 4640 19.54 5767 78 1101 4463 19.79 5564 79 1103 4484 19.74 5587 80 1060 4283 19.84 5343 81 1025 4216 19.56 5241 82 1045 3970 20.84 5015 83 1044 4039 20.54 5083 84 951 3905 19.58 4856 85 952 3715 20.40 4667 86 857 3617 19.16 4474 87 858 3521 19.59 4379 88 857 3461 19.85 4318 89 843 3467 19.56 4310 90 783 3274 19.30 4057 91 821 3073 21.08 3894 92 724 3053 19.17 3777 93 778 3048 20.33 3826 94 702 2859 19.71 3561 95 701 2719 20.50 3420 96 653 2681 19.59 3334 97 635 2651 19.32 3286 98 611 2517 19.53 3128 99 609 2557 19.24 3166 100 583 2392 19.60 2975 101 584 2370 19.77 2954 102 546 2229 19.68 2775 103 510 2268 18.36 2778 104 511 2091 19.64 2602 105 499 2131 18.97 2630 106 511 2089 19.65 2600 107 433 1937 18.27 2370 108 417 1901 17.99 2318 109 442 1805 19.67 2247 110 463 1767 20.76 2230 111 446 1778 20.05 2224 112 363 1563 18.85 1926 113 389 1661 18.98 2050 114 416 1738 19.31 2154 115 360 1603 18.34 1963 116 326 1491 17.94 1817 117 339 1498 18.45 1837 118 339 1444 19.01 1783 119 334 1405 19.21 1739 120 359 1350 21.01 1709 121 301 1312 18.66 1613 122 303 1265 19.32 1568 123 301 1252 19.38 1553 124 329 1259 20.72 1588 125 358 1238 22.43 1596 126 261 1139 18.64 1400 127 240 1111 17.76 1351 128 244 1101 18.14 1345 129 262 1022 20.40 1284 130 217 1019 17.56 1236 131 233 1030 18.45 1263 132 213 941 18.46 1154 133 183 962 15.98 1145 134 208 904 18.71 1112 135 215 929 18.79 1144 136 190 875 17.84 1065 137 205 865 19.16 1070 138 186 857 17.83 1043 139 215 870 19.82 1085 140 194 778 19.96 972 141 185 754 19.70 939 142 171 727 19.04 898 143 143 719 16.59 862 144 135 703 16.11 838 145 160 672 19.23 832 146 164 713 18.70 877 147 159 733 17.83 892 148 148 695 17.56 843 149 127 660 16.14 787 150 120 564 17.54 684 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 18178 183892 9.00 202070 2 9189 56007 14.09 65196 3 7905 68149 10.39 76054 4 5674 63906 8.15 69580 5 2631 83678 3.05 86309 6 2199 93875 2.29 96074 7 1833 63175 2.82 65008 8 1724 58802 2.85 60526 9 1737 58943 2.86 60680 10 2096 54875 3.68 56971 11 3420 52979 6.06 56399 12 1575 53126 2.88 54701 13 1504 52029 2.81 53533 14 1209 49273 2.39 50482 15 1396 47665 2.85 49061 16 1465 45759 3.10 47224 17 1188 46889 2.47 48077 18 1250 47923 2.54 49173 19 1141 43310 2.57 44451 20 1067 42147 2.47 43214 21 1023 41286 2.42 42309 22 1007 41137 2.39 42144 23 956 39153 2.38 40109 24 932 37940 2.40 38872 25 875 37403 2.29 38278 26 862 36275 2.32 37137 27 843 35480 2.32 36323 28 843 35008 2.35 35851 29 798 34377 2.27 35175 30 788 32772 2.35 33560 31 762 31634 2.35 32396 32 672 30522 2.15 31194 33 691 30996 2.18 31687 34 663 29230 2.22 29893 35 671 28508 2.30 29179 36 602 27436 2.15 28038 37 616 27826 2.17 28442 38 610 26232 2.27 26842 39 609 25627 2.32 26236 40 554 24512 2.21 25066 41 562 24040 2.28 24602 42 515 23353 2.16 23868 43 510 23236 2.15 23746 44 498 21391 2.28 21889 45 479 21540 2.18 22019 46 467 20646 2.21 21113 47 466 19965 2.28 20431 48 452 19378 2.28 19830 49 456 19385 2.30 19841 50 448 18468 2.37 18916 51 447 18437 2.37 18884 52 409 17309 2.31 17718 53 376 16998 2.16 17374 54 391 16389 2.33 16780 55 381 15828 2.35 16209 56 370 15273 2.37 15643 57 398 15204 2.55 15602 58 354 14646 2.36 15000 59 333 14508 2.24 14841 60 321 13869 2.26 14190 61 322 13458 2.34 13780 62 316 12676 2.43 12992 63 328 12851 2.49 13179 64 314 12042 2.54 12356 65 282 11945 2.31 12227 66 293 11513 2.48 11806 67 274 11574 2.31 11848 68 278 10710 2.53 10988 69 269 10665 2.46 10934 70 276 10167 2.64 10443 71 254 10002 2.48 10256 72 245 9569 2.50 9814 73 229 9382 2.38 9611 74 262 9216 2.76 9478 75 259 8800 2.86 9059 76 208 8675 2.34 8883 77 210 8276 2.47 8486 78 224 8052 2.71 8276 79 189 7843 2.35 8032 80 188 7478 2.45 7666 81 193 7465 2.52 7658 82 197 7254 2.64 7451 83 167 6884 2.37 7051 84 160 6616 2.36 6776 85 184 6463 2.77 6647 86 151 6408 2.30 6559 87 163 6204 2.56 6367 88 140 5812 2.35 5952 89 146 5963 2.39 6109 90 157 5824 2.62 5981 91 151 5744 2.56 5895 92 112 5261 2.08 5373 93 121 5227 2.26 5348 94 142 5401 2.56 5543 95 117 4775 2.39 4892 96 129 4606 2.72 4735 97 117 4437 2.57 4554 98 119 4155 2.78 4274 99 117 4144 2.75 4261 100 109 4147 2.56 4256 101 114 4094 2.71 4208 102 96 4218 2.23 4314 103 97 3730 2.53 3827 104 87 3494 2.43 3581 105 107 3487 2.98 3594 106 93 3379 2.68 3472 107 81 3234 2.44 3315 108 83 3097 2.61 3180 109 75 3052 2.40 3127 110 76 3050 2.43 3126 111 65 3006 2.12 3071 112 82 2810 2.84 2892 113 71 2750 2.52 2821 114 59 2678 2.16 2737 115 78 2536 2.98 2614 116 73 2470 2.87 2543 117 58 2474 2.29 2532 118 44 2321 1.86 2365 119 67 2262 2.88 2329 120 64 2223 2.80 2287 121 58 2208 2.56 2266 122 44 2125 2.03 2169 123 52 2025 2.50 2077 124 47 1963 2.34 2010 125 38 1926 1.93 1964 126 50 1755 2.77 1805 127 40 1813 2.16 1853 128 39 1721 2.22 1760 129 39 1628 2.34 1667 130 40 1606 2.43 1646 131 47 1619 2.82 1666 132 40 1536 2.54 1576 133 33 1547 2.09 1580 134 40 1442 2.70 1482 135 35 1437 2.38 1472 136 32 1393 2.25 1425 137 38 1345 2.75 1383 138 31 1334 2.27 1365 139 26 1340 1.90 1366 140 20 1212 1.62 1232 141 35 1178 2.89 1213 142 47 1124 4.01 1171 143 29 1077 2.62 1106 144 27 1119 2.36 1146 145 23 1066 2.11 1089 146 31 981 3.06 1012 147 27 1031 2.55 1058 148 32 947 3.27 979 149 13 990 1.30 1003 150 20 936 2.09 956 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 42437 155799 21.41 198236 2 36807 215563 14.58 252370 3 29696 192452 13.37 222148 4 24554 181020 11.94 205574 5 16299 215011 7.05 231310 6 13568 228038 5.62 241606 7 13317 256199 4.94 269516 8 13142 247217 5.05 260359 9 11361 222996 4.85 234357 10 9922 214698 4.42 224620 11 11669 202438 5.45 214107 12 9963 197645 4.80 207608 13 9959 196390 4.83 206349 14 8721 191388 4.36 200109 15 10284 186737 5.22 197021 16 9896 175359 5.34 185255 17 9112 171480 5.05 180592 18 8050 168678 4.56 176728 19 8963 164880 5.16 173843 20 7778 162407 4.57 170185 21 8283 152198 5.16 160481 22 7026 151024 4.45 158050 23 8115 146565 5.25 154680 24 6743 143418 4.49 150161 25 7460 141255 5.02 148715 26 6280 138590 4.33 144870 27 7039 134921 4.96 141960 28 6011 134764 4.27 140775 29 6847 129429 5.02 136276 30 5781 126670 4.36 132451 31 6654 122262 5.16 128916 32 5495 119215 4.41 124710 33 6103 115937 5.00 122040 34 5228 113071 4.42 118299 35 6052 108876 5.27 114928 36 5031 106751 4.50 111782 37 5679 104749 5.14 110428 38 4953 102339 4.62 107292 39 5440 97911 5.26 103351 40 4706 96108 4.67 100814 41 5218 94239 5.25 99457 42 4416 91232 4.62 95648 43 5150 88223 5.52 93373 44 4360 86640 4.79 91000 45 4844 84398 5.43 89242 46 4031 81777 4.70 85808 47 4621 79793 5.47 84414 48 3895 77119 4.81 81014 49 4303 74754 5.44 79057 50 3855 73280 5.00 77135 51 4297 70993 5.71 75290 52 3661 68481 5.07 72142 53 3975 66685 5.63 70660 54 3497 65033 5.10 68530 55 3736 62651 5.63 66387 56 3370 61672 5.18 65042 57 3562 59418 5.66 62980 58 3131 59101 5.03 62232 59 3542 56857 5.86 60399 60 2882 54528 5.02 57410 61 3143 52690 5.63 55833 62 2852 52953 5.11 55805 63 3061 49159 5.86 52220 64 2598 48692 5.07 51290 65 2896 46705 5.84 49601 66 2492 45574 5.18 48066 67 2797 45162 5.83 47959 68 2416 43303 5.28 45719 69 2496 43051 5.48 45547 70 2231 41297 5.13 43528 71 2382 39206 5.73 41588 72 2037 38658 5.01 40695 73 2266 38244 5.59 40510 74 2034 37920 5.09 39954 75 2126 35396 5.67 37522 76 1875 34319 5.18 36194 77 1909 34104 5.30 36013 78 1736 33594 4.91 35330 79 1848 32330 5.41 34178 80 1663 31038 5.09 32701 81 1736 30244 5.43 31980 82 1514 29567 4.87 31081 83 1655 27958 5.59 29613 84 1449 27119 5.07 28568 85 1397 26437 5.02 27834 86 1266 25387 4.75 26653 87 1354 24689 5.20 26043 88 1232 24440 4.80 25672 89 1236 23555 4.99 24791 90 1127 22871 4.70 23998 91 1162 21995 5.02 23157 92 1039 21422 4.63 22461 93 1056 21078 4.77 22134 94 958 20467 4.47 21425 95 991 19765 4.77 20756 96 906 19862 4.36 20768 97 928 19099 4.63 20027 98 894 17944 4.75 18838 99 888 17517 4.82 18405 100 769 16959 4.34 17728 101 827 16534 4.76 17361 102 717 16162 4.25 16879 103 812 15876 4.87 16688 104 698 15147 4.41 15845 105 761 15079 4.80 15840 106 608 14164 4.12 14772 107 670 13667 4.67 14337 108 579 13441 4.13 14020 109 594 12491 4.54 13085 110 526 12617 4.00 13143 111 579 12470 4.44 13049 112 504 11846 4.08 12350 113 523 11625 4.31 12148 114 472 11175 4.05 11647 115 486 10752 4.32 11238 116 435 10401 4.01 10836 117 445 10105 4.22 10550 118 371 9714 3.68 10085 119 407 9504 4.11 9911 120 393 9235 4.08 9628 121 409 9044 4.33 9453 122 371 8616 4.13 8987 123 351 8328 4.04 8679 124 329 8074 3.92 8403 125 335 7875 4.08 8210 126 306 7719 3.81 8025 127 319 7457 4.10 7776 128 292 7217 3.89 7509 129 261 6956 3.62 7217 130 242 6889 3.39 7131 131 272 6951 3.77 7223 132 230 6429 3.45 6659 133 240 6238 3.70 6478 134 230 6161 3.60 6391 135 251 5900 4.08 6151 136 232 5713 3.90 5945 137 215 5479 3.78 5694 138 180 5453 3.20 5633 139 195 5101 3.68 5296 140 177 5026 3.40 5203 141 204 4794 4.08 4998 142 164 4771 3.32 4935 143 187 4571 3.93 4758 144 155 4512 3.32 4667 145 154 4469 3.33 4623 146 147 4394 3.24 4541 147 152 4273 3.44 4425 148 158 4059 3.75 4217 149 158 3972 3.83 4130 150 120 3779 3.08 3899