CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 92206 159841 36.58 252047 2 103456 237998 30.30 341454 3 59793 283776 17.40 343569 4 33459 276312 10.80 309771 5 50768 272087 15.72 322855 6 34965 202334 14.73 237299 7 41641 197979 17.38 239620 8 52852 220854 19.31 273706 9 56097 212099 20.92 268196 10 50166 202542 19.85 252708 11 56445 195565 22.40 252010 12 63130 190628 24.88 253758 13 52883 191315 21.66 244198 14 48825 186059 20.79 234884 15 48503 183810 20.88 232313 16 46355 180434 20.44 226789 17 45332 179894 20.13 225226 18 45362 184446 19.74 229808 19 46124 187466 19.75 233590 20 50382 200614 20.07 250996 21 53577 205409 20.69 258986 22 54028 201185 21.17 255213 23 53234 206534 20.49 259768 24 52683 203709 20.55 256392 25 51940 197928 20.79 249868 26 50251 191642 20.77 241893 27 48597 189500 20.41 238097 28 48423 190007 20.31 238430 29 48734 190208 20.40 238942 30 49237 194180 20.23 243417 31 49467 195991 20.15 245458 32 50427 195136 20.54 245563 33 50181 194609 20.50 244790 34 50310 192835 20.69 243145 35 49913 191705 20.66 241618 36 49626 192315 20.51 241941 37 49738 191385 20.63 241123 38 49214 190078 20.57 239292 39 48846 191041 20.36 239887 40 48368 188655 20.41 237023 41 48614 186967 20.64 235581 42 47675 188529 20.18 236204 43 48165 188314 20.37 236479 44 48860 187747 20.65 236607 45 47163 186661 20.17 233824 46 47059 185015 20.28 232074 47 46524 182217 20.34 228741 48 46207 180053 20.42 226260 49 46001 179876 20.37 225877 50 45643 179333 20.29 224976 51 45288 177570 20.32 222858 52 43940 175553 20.02 219493 53 44274 174697 20.22 218971 54 43864 174268 20.11 218132 55 42730 170541 20.04 213271 56 42754 167841 20.30 210595 57 42204 167432 20.13 209636 58 42510 167387 20.25 209897 59 41397 163629 20.19 205026 60 40787 162592 20.05 203379 61 39764 158931 20.01 198695 62 39375 157260 20.02 196635 63 38759 155700 19.93 194459 64 38589 153976 20.04 192565 65 37851 151551 19.98 189402 66 37812 150592 20.07 188404 67 37060 148835 19.94 185895 68 36108 146179 19.81 182287 69 35771 143727 19.93 179498 70 35503 140339 20.19 175842 71 34852 139229 20.02 174081 72 33640 137954 19.60 171594 73 33190 134307 19.82 167497 74 32638 131552 19.88 164190 75 32243 129635 19.92 161878 76 31249 126997 19.75 158246 77 30493 122673 19.91 153166 78 29795 120659 19.80 150454 79 29483 119347 19.81 148830 80 28844 115933 19.92 144777 81 28554 114677 19.94 143231 82 27257 111998 19.57 139255 83 27225 109811 19.87 137036 84 26810 108427 19.82 135237 85 25994 105862 19.71 131856 86 25312 103747 19.61 129059 87 24835 101713 19.62 126548 88 24442 100222 19.61 124664 89 23811 97765 19.59 121576 90 23495 95985 19.66 119480 91 22423 93381 19.36 115804 92 22325 90884 19.72 113209 93 21883 89184 19.70 111067 94 21112 86402 19.64 107514 95 20693 84702 19.63 105395 96 20237 83086 19.59 103323 97 19738 81162 19.56 100900 98 19308 79013 19.64 98321 99 18818 77557 19.53 96375 100 18310 76069 19.40 94379 101 17837 73927 19.44 91764 102 17327 72252 19.34 89579 103 17079 70672 19.46 87751 104 16523 68522 19.43 85045 105 16316 67303 19.51 83619 106 15996 65491 19.63 81487 107 15194 63049 19.42 78243 108 14780 61221 19.45 76001 109 14578 60190 19.50 74768 110 14136 58861 19.37 72997 111 13827 57367 19.42 71194 112 13398 55234 19.52 68632 113 13126 54089 19.53 67215 114 12550 52908 19.17 65458 115 12278 51239 19.33 63517 116 12021 50257 19.30 62278 117 11836 49436 19.32 61272 118 11369 48375 19.03 59744 119 10877 46693 18.89 57570 120 10740 45640 19.05 56380 121 10517 44393 19.15 54910 122 10276 43377 19.15 53653 123 9703 41819 18.83 51522 124 9631 40612 19.17 50243 125 9518 40129 19.17 49647 126 9061 38907 18.89 47968 127 8687 37936 18.63 46623 128 8666 36598 19.15 45264 129 8199 35288 18.85 43487 130 8177 34616 19.11 42793 131 7924 33633 19.07 41557 132 7536 32363 18.89 39899 133 7221 31529 18.63 38750 134 7166 30495 19.03 37661 135 7063 29858 19.13 36921 136 6809 28831 19.10 35640 137 6414 28147 18.56 34561 138 6474 27249 19.20 33723 139 6125 26565 18.74 32690 140 5770 25555 18.42 31325 141 5751 24790 18.83 30541 142 5493 24078 18.58 29571 143 5373 23388 18.68 28761 144 5188 22844 18.51 28032 145 4986 22110 18.40 27096 146 4931 21687 18.53 26618 147 4608 21404 17.71 26012 148 4691 20717 18.46 25408 149 4294 20012 17.67 24306 150 4208 19588 17.68 23796 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 160239 769621 17.23 929860 2 108651 254276 29.94 362927 3 97744 360231 21.34 457975 4 33084 346477 8.72 379561 5 24222 445562 5.16 469784 6 16312 457601 3.44 473913 7 14825 371171 3.84 385996 8 16347 391830 4.00 408177 9 15888 374727 4.07 390615 10 17625 348663 4.81 366288 11 25729 338775 7.06 364504 12 15245 348955 4.19 364200 13 14017 348841 3.86 362858 14 13124 340752 3.71 353876 15 13236 331406 3.84 344642 16 14364 324057 4.24 338421 17 12425 337567 3.55 349992 18 12685 341670 3.58 354355 19 13039 347208 3.62 360247 20 13409 354604 3.64 368013 21 13707 360902 3.66 374609 22 13900 367868 3.64 381768 23 13674 362146 3.64 375820 24 13154 349322 3.63 362476 25 13127 350501 3.61 363628 26 12986 340193 3.68 353179 27 13080 341471 3.69 354551 28 13251 345754 3.69 359005 29 13253 352088 3.63 365341 30 13448 356884 3.63 370332 31 13825 357486 3.72 371311 32 13528 355352 3.67 368880 33 13681 360388 3.66 374069 34 13774 352253 3.76 366027 35 13623 350624 3.74 364247 36 13465 350339 3.70 363804 37 14069 355916 3.80 369985 38 13958 349680 3.84 363638 39 13886 351841 3.80 365727 40 13562 346352 3.77 359914 41 13796 346907 3.82 360703 42 13568 344389 3.79 357957 43 13959 347558 3.86 361517 44 13797 340927 3.89 354724 45 13982 345709 3.89 359691 46 13717 339379 3.88 353096 47 13895 339464 3.93 353359 48 13771 334044 3.96 347815 49 14282 335991 4.08 350273 50 13900 328674 4.06 342574 51 13957 328016 4.08 341973 52 14023 322335 4.17 336358 53 14011 324205 4.14 338216 54 13913 318743 4.18 332656 55 13948 319488 4.18 333436 56 13738 312075 4.22 325813 57 14118 312950 4.32 327068 58 13692 306309 4.28 320001 59 13702 302832 4.33 316534 60 13662 297808 4.39 311470 61 13760 297325 4.42 311085 62 13346 290219 4.40 303565 63 13374 288208 4.43 301582 64 12913 284350 4.34 297263 65 13236 281511 4.49 294747 66 12793 277083 4.41 289876 67 12776 273999 4.46 286775 68 12633 266975 4.52 279608 69 12742 264164 4.60 276906 70 12310 259579 4.53 271889 71 12112 254352 4.55 266464 72 12136 248712 4.65 260848 73 11899 248067 4.58 259966 74 11647 240925 4.61 252572 75 11497 236882 4.63 248379 76 11258 232016 4.63 243274 77 11236 228393 4.69 239629 78 11080 223330 4.73 234410 79 10898 220688 4.71 231586 80 10798 213322 4.82 224120 81 10649 209961 4.83 220610 82 10456 205592 4.84 216048 83 10374 201110 4.91 211484 84 9867 196016 4.79 205883 85 9875 193934 4.85 203809 86 9548 187718 4.84 197266 87 9560 184181 4.93 193741 88 9386 180085 4.95 189471 89 9261 177237 4.97 186498 90 8853 173421 4.86 182274 91 8865 168967 4.99 177832 92 8653 164386 5.00 173039 93 8430 160638 4.99 169068 94 8117 156322 4.94 164439 95 8121 152128 5.07 160249 96 7834 147935 5.03 155769 97 7852 144650 5.15 152502 98 7607 140499 5.14 148106 99 7407 137750 5.10 145157 100 7278 134346 5.14 141624 101 7089 131032 5.13 138121 102 7039 128298 5.20 135337 103 6722 124749 5.11 131471 104 6447 121595 5.04 128042 105 6445 118862 5.14 125307 106 6214 115564 5.10 121778 107 6074 112204 5.14 118278 108 5997 109325 5.20 115322 109 5907 106590 5.25 112497 110 5640 103669 5.16 109309 111 5646 101136 5.29 106782 112 5438 98670 5.22 104108 113 5289 95872 5.23 101161 114 5161 92814 5.27 97975 115 5070 90096 5.33 95166 116 4943 88290 5.30 93233 117 4809 86241 5.28 91050 118 4662 83664 5.28 88326 119 4670 81250 5.44 85920 120 4508 78914 5.40 83422 121 4289 77621 5.24 81910 122 4306 75270 5.41 79576 123 4113 72982 5.33 77095 124 4015 70924 5.36 74939 125 3852 69322 5.26 73174 126 3811 67211 5.37 71022 127 3791 65167 5.50 68958 128 3618 63492 5.39 67110 129 3545 61831 5.42 65376 130 3495 59561 5.54 63056 131 3245 58296 5.27 61541 132 3160 56187 5.32 59347 133 3204 54796 5.52 58000 134 3110 53155 5.53 56265 135 2970 51684 5.43 54654 136 2831 50514 5.31 53345 137 2784 48619 5.42 51403 138 2729 47601 5.42 50330 139 2729 45671 5.64 48400 140 2555 44280 5.46 46835 141 2439 42968 5.37 45407 142 2412 41367 5.51 43779 143 2256 40206 5.31 42462 144 2183 39409 5.25 41592 145 2119 37996 5.28 40115 146 2116 36943 5.42 39059 147 1957 35943 5.16 37900 148 1935 35421 5.18 37356 149 1995 34126 5.52 36121 150 2015 33465 5.68 35480 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 452513 826529 35.38 1279042 2 426426 1128373 27.43 1554799 3 334192 1084050 23.56 1418242 4 179468 1195027 13.06 1374495 5 156363 1367467 10.26 1523830 6 138792 1432398 8.83 1571190 7 154021 1604776 8.76 1758797 8 149957 1644613 8.36 1794570 9 149856 1511975 9.02 1661831 10 132488 1451434 8.36 1583922 11 159121 1426472 10.04 1585593 12 140257 1457991 8.78 1598248 13 145931 1462615 9.07 1608546 14 136672 1471845 8.50 1608517 15 155690 1475213 9.55 1630903 16 143926 1463216 8.96 1607142 17 146138 1438479 9.22 1584617 18 133029 1432435 8.50 1565464 19 153229 1415516 9.77 1568745 20 143851 1451706 9.02 1595557 21 153428 1451832 9.56 1605260 22 143546 1465777 8.92 1609323 23 155439 1463976 9.60 1619415 24 137980 1458826 8.64 1596806 25 149719 1467964 9.26 1617683 26 139152 1479523 8.60 1618675 27 148102 1489859 9.04 1637961 28 133504 1520641 8.07 1654145 29 144155 1515046 8.69 1659201 30 132702 1518848 8.03 1651550 31 145129 1500774 8.82 1645903 32 131031 1502197 8.02 1633228 33 138501 1491229 8.50 1629730 34 128866 1489570 7.96 1618436 35 138933 1479433 8.58 1618366 36 123433 1481567 7.69 1605000 37 131400 1480269 8.15 1611669 38 121470 1475085 7.61 1596555 39 128711 1451551 8.14 1580262 40 116210 1451858 7.41 1568068 41 123538 1443903 7.88 1567441 42 114169 1446335 7.32 1560504 43 122396 1437414 7.85 1559810 44 112341 1432014 7.27 1544355 45 116892 1418031 7.62 1534923 46 109084 1410682 7.18 1519766 47 115678 1401420 7.62 1517098 48 105851 1390221 7.08 1496072 49 109051 1377327 7.34 1486378 50 103935 1373446 7.04 1477381 51 107367 1357784 7.33 1465151 52 99056 1345644 6.86 1444700 53 101950 1332494 7.11 1434444 54 97109 1321977 6.84 1419086 55 100065 1303832 7.13 1403897 56 92767 1292510 6.70 1385277 57 92930 1270438 6.82 1363368 58 88993 1257491 6.61 1346484 59 90941 1237044 6.85 1327985 60 84250 1217407 6.47 1301657 61 84143 1198750 6.56 1282893 62 82169 1186619 6.48 1268788 63 81853 1162636 6.58 1244489 64 77448 1147257 6.32 1224705 65 76359 1129496 6.33 1205855 66 73580 1110739 6.21 1184319 67 73624 1092686 6.31 1166310 68 69676 1072408 6.10 1142084 69 68762 1059572 6.09 1128334 70 66206 1042933 5.97 1109139 71 65345 1022256 6.01 1087601 72 63454 1005432 5.94 1068886 73 62151 986632 5.93 1048783 74 60201 972425 5.83 1032626 75 59685 949619 5.91 1009304 76 56032 928632 5.69 984664 77 55576 909338 5.76 964914 78 53523 896187 5.64 949710 79 53249 876211 5.73 929460 80 50608 856504 5.58 907112 81 49973 837425 5.63 887398 82 48498 821352 5.58 869850 83 48064 802820 5.65 850884 84 45834 787343 5.50 833177 85 45105 767211 5.55 812316 86 43624 752865 5.48 796489 87 43018 734855 5.53 777873 88 40953 717523 5.40 758476 89 40291 701427 5.43 741718 90 39155 683137 5.42 722292 91 38583 665054 5.48 703637 92 36968 652887 5.36 689855 93 36495 637377 5.42 673872 94 35610 621502 5.42 657112 95 34927 606110 5.45 641037 96 33918 592360 5.42 626278 97 32909 577715 5.39 610624 98 32176 562490 5.41 594666 99 31584 547268 5.46 578852 100 30157 535507 5.33 565664 101 29818 522742 5.40 552560 102 29115 511280 5.39 540395 103 28503 497114 5.42 525617 104 26888 483950 5.26 510838 105 26518 470593 5.33 497111 106 25681 458675 5.30 484356 107 25490 446744 5.40 472234 108 24380 435071 5.31 459451 109 23652 421391 5.31 445043 110 23064 411632 5.31 434696 111 23171 402472 5.44 425643 112 21990 390532 5.33 412522 113 21697 379135 5.41 400832 114 21266 368960 5.45 390226 115 20774 358268 5.48 379042 116 19837 348968 5.38 368805 117 19238 339239 5.37 358477 118 18796 330270 5.38 349066 119 18367 320271 5.42 338638 120 17691 311046 5.38 328737 121 17473 302628 5.46 320101 122 17081 295993 5.46 313074 123 16616 284737 5.51 301353 124 15816 278078 5.38 293894 125 15403 270254 5.39 285657 126 15262 262359 5.50 277621 127 14615 255092 5.42 269707 128 14250 246826 5.46 261076 129 13829 240483 5.44 254312 130 13452 233029 5.46 246481 131 13234 227125 5.51 240359 132 12791 220847 5.47 233638 133 12564 215162 5.52 227726 134 12274 207966 5.57 220240 135 11760 202191 5.50 213951 136 11250 196678 5.41 207928 137 10988 190671 5.45 201659 138 10628 184183 5.46 194811 139 10169 178027 5.40 188196 140 9973 173322 5.44 183295 141 9789 167267 5.53 177056 142 9380 162670 5.45 172050 143 9161 157559 5.49 166720 144 8837 153211 5.45 162048 145 8394 149570 5.31 157964 146 8320 145267 5.42 153587 147 7847 142216 5.23 150063 148 7926 137481 5.45 145407 149 7905 134197 5.56 142102 150 7536 129413 5.50 136949 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 6313 15423 29.04 21736 2 6768 22360 23.24 29128 3 4359 27478 13.69 31837 4 2552 24712 9.36 27264 5 3754 25453 12.85 29207 6 2464 16427 13.04 18891 7 2724 15528 14.92 18252 8 3219 15395 17.29 18614 9 3156 14650 17.72 17806 10 2921 14025 17.24 16946 11 3465 13252 20.73 16717 12 4779 12822 27.15 17601 13 3734 12261 23.34 15995 14 2602 11298 18.72 13900 15 2513 11055 18.52 13568 16 2466 10890 18.46 13356 17 2359 10954 17.72 13313 18 2275 10108 18.37 12383 19 2266 10006 18.46 12272 20 2183 10151 17.70 12334 21 2393 10095 19.16 12488 22 2322 9665 19.37 11987 23 2172 9565 18.51 11737 24 2098 8918 19.05 11016 25 1992 8660 18.70 10652 26 2006 8619 18.88 10625 27 1846 7941 18.86 9787 28 1876 7793 19.40 9669 29 1728 7479 18.77 9207 30 1728 7312 19.12 9040 31 1636 7029 18.88 8665 32 1552 6778 18.63 8330 33 1536 6425 19.29 7961 34 1537 6259 19.72 7796 35 1498 6024 19.91 7522 36 1340 5876 18.57 7216 37 1384 5873 19.07 7257 38 1327 5675 18.95 7002 39 1310 5321 19.76 6631 40 1205 5139 18.99 6344 41 1163 4720 19.77 5883 42 1185 4694 20.16 5879 43 1091 4662 18.96 5753 44 1136 4488 20.20 5624 45 984 4198 18.99 5182 46 952 4028 19.12 4980 47 972 4047 19.37 5019 48 919 3752 19.67 4671 49 920 3752 19.69 4672 50 863 3736 18.76 4599 51 847 3476 19.59 4323 52 766 3265 19.00 4031 53 756 3287 18.70 4043 54 766 3223 19.20 3989 55 735 3053 19.40 3788 56 646 2894 18.25 3540 57 700 2757 20.25 3457 58 724 2903 19.96 3627 59 669 2713 19.78 3382 60 670 2660 20.12 3330 61 590 2444 19.45 3034 62 599 2347 20.33 2946 63 543 2279 19.24 2822 64 511 2253 18.49 2764 65 464 2092 18.15 2556 66 492 2030 19.51 2522 67 491 2020 19.55 2511 68 456 2086 17.94 2542 69 428 1838 18.89 2266 70 416 1842 18.42 2258 71 475 1827 20.63 2302 72 413 1811 18.57 2224 73 386 1710 18.42 2096 74 422 1603 20.84 2025 75 373 1627 18.65 2000 76 367 1520 19.45 1887 77 327 1423 18.69 1750 78 350 1405 19.94 1755 79 353 1333 20.94 1686 80 288 1354 17.54 1642 81 302 1271 19.20 1573 82 282 1206 18.95 1488 83 267 1170 18.58 1437 84 264 1214 17.86 1478 85 236 1222 16.19 1458 86 242 1015 19.25 1257 87 240 1042 18.72 1282 88 228 958 19.22 1186 89 228 1049 17.85 1277 90 240 1014 19.14 1254 91 232 896 20.57 1128 92 195 932 17.30 1127 93 196 947 17.15 1143 94 196 796 19.76 992 95 195 820 19.21 1015 96 159 859 15.62 1018 97 178 761 18.96 939 98 175 722 19.51 897 99 146 721 16.84 867 100 159 734 17.81 893 101 124 781 13.70 905 102 129 649 16.58 778 103 152 671 18.47 823 104 140 641 17.93 781 105 140 603 18.84 743 106 125 598 17.29 723 107 121 535 18.45 656 108 113 467 19.48 580 109 94 529 15.09 623 110 108 562 16.12 670 111 112 485 18.76 597 112 103 463 18.20 566 113 90 467 16.16 557 114 97 500 16.25 597 115 109 416 20.76 525 116 92 403 18.59 495 117 99 435 18.54 534 118 77 382 16.78 459 119 79 377 17.32 456 120 74 372 16.59 446 121 93 400 18.86 493 122 86 357 19.41 443 123 76 313 19.54 389 124 88 301 22.62 389 125 87 329 20.91 416 126 64 331 16.20 395 127 60 330 15.38 390 128 64 282 18.50 346 129 58 309 15.80 367 130 55 272 16.82 327 131 44 299 12.83 343 132 67 270 19.88 337 133 49 265 15.61 314 134 48 264 15.38 312 135 65 293 18.16 358 136 58 254 18.59 312 137 50 209 19.31 259 138 43 236 15.41 279 139 51 240 17.53 291 140 50 211 19.16 261 141 43 186 18.78 229 142 52 211 19.77 263 143 27 203 11.74 230 144 42 182 18.75 224 145 26 205 11.26 231 146 44 172 20.37 216 147 36 188 16.07 224 148 36 198 15.38 234 149 28 168 14.29 196 150 29 158 15.51 187 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 12023 86971 12.15 98994 2 6433 22802 22.00 29235 3 6410 29909 17.65 36319 4 2884 27943 9.36 30827 5 2090 38540 5.14 40630 6 1438 39831 3.48 41269 7 1246 26731 4.45 27977 8 1211 26356 4.39 27567 9 1040 24562 4.06 25602 10 1397 22218 5.92 23615 11 2872 21367 11.85 24239 12 1011 21038 4.59 22049 13 997 20825 4.57 21822 14 763 20041 3.67 20804 15 852 18284 4.45 19136 16 1136 17429 6.12 18565 17 695 18225 3.67 18920 18 755 18230 3.98 18985 19 750 16845 4.26 17595 20 726 16383 4.24 17109 21 687 16196 4.07 16883 22 647 16309 3.82 16956 23 601 15701 3.69 16302 24 601 14578 3.96 15179 25 560 14267 3.78 14827 26 511 13715 3.59 14226 27 543 13751 3.80 14294 28 572 13616 4.03 14188 29 504 12979 3.74 13483 30 473 12259 3.72 12732 31 477 11727 3.91 12204 32 435 11258 3.72 11693 33 430 10981 3.77 11411 34 411 10762 3.68 11173 35 428 10389 3.96 10817 36 372 9843 3.64 10215 37 444 9903 4.29 10347 38 387 9287 4.00 9674 39 324 9234 3.39 9558 40 343 8602 3.83 8945 41 356 8447 4.04 8803 42 339 8311 3.92 8650 43 342 8069 4.07 8411 44 329 7621 4.14 7950 45 322 7752 3.99 8074 46 307 7125 4.13 7432 47 298 6885 4.15 7183 48 283 6908 3.94 7191 49 271 6790 3.84 7061 50 307 6530 4.49 6837 51 284 5989 4.53 6273 52 246 5854 4.03 6100 53 262 5785 4.33 6047 54 249 5426 4.39 5675 55 263 5368 4.67 5631 56 226 5170 4.19 5396 57 262 4912 5.06 5174 58 228 5106 4.27 5334 59 246 5299 4.44 5545 60 183 4382 4.01 4565 61 207 4307 4.59 4514 62 158 4002 3.80 4160 63 177 3957 4.28 4134 64 187 3855 4.63 4042 65 196 3950 4.73 4146 66 155 3722 4.00 3877 67 179 3652 4.67 3831 68 151 3481 4.16 3632 69 158 3449 4.38 3607 70 131 3205 3.93 3336 71 144 3072 4.48 3216 72 132 2978 4.24 3110 73 153 2977 4.89 3130 74 134 2884 4.44 3018 75 106 2634 3.87 2740 76 126 2697 4.46 2823 77 118 2406 4.68 2524 78 110 2285 4.59 2395 79 115 2482 4.43 2597 80 97 2269 4.10 2366 81 119 2330 4.86 2449 82 101 2001 4.80 2102 83 100 1895 5.01 1995 84 91 1941 4.48 2032 85 115 2082 5.23 2197 86 83 1714 4.62 1797 87 93 1792 4.93 1885 88 90 1697 5.04 1787 89 86 1896 4.34 1982 90 72 1845 3.76 1917 91 47 1623 2.81 1670 92 84 1406 5.64 1490 93 68 1429 4.54 1497 94 66 1346 4.67 1412 95 60 1318 4.35 1378 96 77 1197 6.04 1274 97 42 1291 3.15 1333 98 58 1086 5.07 1144 99 51 1102 4.42 1153 100 45 1090 3.96 1135 101 69 1062 6.10 1131 102 59 1101 5.09 1160 103 39 944 3.97 983 104 55 972 5.36 1027 105 49 956 4.88 1005 106 37 883 4.02 920 107 47 850 5.24 897 108 39 830 4.49 869 109 28 858 3.16 886 110 38 761 4.76 799 111 34 817 4.00 851 112 40 722 5.25 762 113 50 700 6.67 750 114 42 621 6.33 663 115 32 637 4.78 669 116 23 593 3.73 616 117 33 625 5.02 658 118 22 556 3.81 578 119 23 528 4.17 551 120 32 588 5.16 620 121 35 641 5.18 676 122 20 496 3.88 516 123 23 443 4.94 466 124 21 433 4.63 454 125 28 466 5.67 494 126 24 436 5.22 460 127 20 439 4.36 459 128 17 430 3.80 447 129 25 406 5.80 431 130 20 404 4.72 424 131 19 366 4.94 385 132 26 372 6.53 398 133 20 385 4.94 405 134 18 336 5.08 354 135 19 356 5.07 375 136 12 312 3.70 324 137 22 311 6.61 333 138 21 272 7.17 293 139 11 278 3.81 289 140 11 282 3.75 293 141 16 253 5.95 269 142 17 284 5.65 301 143 6 285 2.06 291 144 11 244 4.31 255 145 12 219 5.19 231 146 9 208 4.15 217 147 14 219 6.01 233 148 14 242 5.47 256 149 10 208 4.59 218 150 13 210 5.83 223 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 29324 72998 28.66 102322 2 26265 104511 20.08 130776 3 21286 91274 18.91 112560 4 12296 88714 12.17 101010 5 11722 105105 10.03 116827 6 9643 108584 8.16 118227 7 9853 118702 7.66 128555 8 9980 114990 7.99 124970 9 8562 104899 7.55 113461 10 6849 99112 6.46 105961 11 9502 92477 9.32 101979 12 7608 91705 7.66 99313 13 7642 88244 7.97 95886 14 6415 86344 6.92 92759 15 8313 84580 8.95 92893 16 7877 80309 8.93 88186 17 7142 77826 8.41 84968 18 6054 75934 7.38 81988 19 7197 73307 8.94 80504 20 5984 72551 7.62 78535 21 6683 68489 8.89 75172 22 5530 68546 7.47 74076 23 6768 65551 9.36 72319 24 5245 65055 7.46 70300 25 6251 62367 9.11 68618 26 5300 61913 7.89 67213 27 6185 60009 9.34 66194 28 4894 59966 7.55 64860 29 5727 56685 9.18 62412 30 4816 55960 7.92 60776 31 5720 53514 9.66 59234 32 4638 52423 8.13 57061 33 5188 50593 9.30 55781 34 4531 49277 8.42 53808 35 5342 46391 10.33 51733 36 4275 46263 8.46 50538 37 4991 43999 10.19 48990 38 4333 43436 9.07 47769 39 5115 41012 11.09 46127 40 3991 40639 8.94 44630 41 4668 38665 10.77 43333 42 3848 38624 9.06 42472 43 4503 36830 10.89 41333 44 3753 35416 9.58 39169 45 4182 34243 10.88 38425 46 3540 33060 9.67 36600 47 4128 31673 11.53 35801 48 3416 30959 9.94 34375 49 3723 29242 11.29 32965 50 3234 28964 10.04 32198 51 3685 27539 11.80 31224 52 2956 27298 9.77 30254 53 3338 25575 11.54 28913 54 3124 25368 10.96 28492 55 3488 23812 12.78 27300 56 2822 23682 10.65 26504 57 3021 22474 11.85 25495 58 2618 22336 10.49 24954 59 3147 21159 12.95 24306 60 2414 20679 10.45 23093 61 2698 19561 12.12 22259 62 2372 19479 10.86 21851 63 2499 18014 12.18 20513 64 2190 17938 10.88 20128 65 2492 17005 12.78 19497 66 2003 16486 10.83 18489 67 2292 15694 12.74 17986 68 1872 15422 10.82 17294 69 2042 15044 11.95 17086 70 1750 14656 10.67 16406 71 1991 13686 12.70 15677 72 1572 13587 10.37 15159 73 1852 13270 12.25 15122 74 1479 13245 10.04 14724 75 1721 11963 12.58 13684 76 1347 11578 10.42 12925 77 1493 11145 11.81 12638 78 1292 11043 10.47 12335 79 1437 10402 12.14 11839 80 1238 10090 10.93 11328 81 1347 9537 12.38 10884 82 1090 9488 10.30 10578 83 1240 8883 12.25 10123 84 990 8642 10.28 9632 85 1073 8385 11.34 9458 86 922 8374 9.92 9296 87 1080 7928 11.99 9008 88 846 7768 9.82 8614 89 900 7146 11.19 8046 90 829 6948 10.66 7777 91 841 6634 11.25 7475 92 710 6710 9.57 7420 93 795 6248 11.29 7043 94 712 6079 10.48 6791 95 782 5969 11.58 6751 96 681 5844 10.44 6525 97 658 5521 10.65 6179 98 609 5336 10.24 5945 99 675 5184 11.52 5859 100 601 4896 10.93 5497 101 569 4782 10.63 5351 102 526 4613 10.24 5139 103 566 4499 11.17 5065 104 488 4232 10.34 4720 105 535 4277 11.12 4812 106 454 3945 10.32 4399 107 497 3823 11.50 4320 108 408 3607 10.16 4015 109 423 3571 10.59 3994 110 459 3364 12.01 3823 111 423 3285 11.41 3708 112 399 3178 11.15 3577 113 398 3034 11.60 3432 114 393 2982 11.64 3375 115 399 2824 12.38 3223 116 329 2723 10.78 3052 117 316 2675 10.57 2991 118 320 2573 11.06 2893 119 367 2471 12.93 2838 120 307 2422 11.25 2729 121 329 2363 12.22 2692 122 305 2220 12.08 2525 123 277 2082 11.74 2359 124 278 2036 12.01 2314 125 287 1947 12.85 2234 126 276 1927 12.53 2203 127 250 1830 12.02 2080 128 250 1793 12.24 2043 129 248 1759 12.36 2007 130 251 1730 12.67 1981 131 224 1617 12.17 1841 132 218 1557 12.28 1775 133 212 1413 13.05 1625 134 249 1465 14.53 1714 135 196 1364 12.56 1560 136 214 1436 12.97 1650 137 203 1312 13.40 1515 138 200 1284 13.48 1484 139 210 1257 14.31 1467 140 210 1202 14.87 1412 141 186 1078 14.72 1264 142 196 1152 14.54 1348 143 188 1036 15.36 1224 144 183 1018 15.24 1201 145 186 1034 15.25 1220 146 188 985 16.03 1173 147 166 991 14.35 1157 148 168 971 14.75 1139 149 177 972 15.40 1149 150 167 860 16.26 1027