CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 183779 626495 22.68 810274 2 195527 933530 17.32 1129057 3 164127 1238443 11.70 1402570 4 174150 876772 16.57 1050922 5 143318 1122429 11.32 1265747 6 115159 795319 12.65 910478 7 115726 710379 14.01 826105 8 130665 776668 14.40 907333 9 137858 778772 15.04 916630 10 146264 747773 16.36 894037 11 160194 791820 16.83 952014 12 177126 790201 18.31 967327 13 175810 787792 18.25 963602 14 172823 792042 17.91 964865 15 175164 785984 18.22 961148 16 176000 793316 18.16 969316 17 181508 800240 18.49 981748 18 175689 814481 17.74 990170 19 170228 769120 18.12 939348 20 176351 786430 18.32 962781 21 178759 805660 18.16 984419 22 177919 805703 18.09 983622 23 179338 799648 18.32 978986 24 179663 817060 18.03 996723 25 182007 810084 18.35 992091 26 183148 799048 18.65 982196 27 183317 816653 18.33 999970 28 181205 799037 18.49 980242 29 181668 799122 18.52 980790 30 182086 812881 18.30 994967 31 181529 811127 18.29 992656 32 180593 802349 18.37 982942 33 180682 807127 18.29 987809 34 181234 801273 18.45 982507 35 182227 803638 18.48 985865 36 181323 832095 17.89 1013418 37 180627 795275 18.51 975902 38 184371 809993 18.54 994364 39 181502 815780 18.20 997282 40 180265 789868 18.58 970133 41 182540 793853 18.70 976393 42 180939 800192 18.44 981131 43 180850 786788 18.69 967638 44 184089 798511 18.73 982600 45 180064 791923 18.53 971987 46 179042 780874 18.65 959916 47 178305 777858 18.65 956163 48 179819 789884 18.54 969703 49 177751 778938 18.58 956689 50 178134 784766 18.50 962900 51 174639 777135 18.35 951774 52 172067 771233 18.24 943300 53 171419 757013 18.46 928432 54 170179 756484 18.36 926663 55 170313 754050 18.42 924363 56 170381 748227 18.55 918608 57 171017 753667 18.49 924684 58 165334 741912 18.22 907246 59 165428 735564 18.36 900992 60 163184 738810 18.09 901994 61 160582 714850 18.34 875432 62 160217 709192 18.43 869409 63 157144 707081 18.18 864225 64 157107 701736 18.29 858843 65 156511 695887 18.36 852398 66 155181 697044 18.21 852225 67 155673 683157 18.56 838830 68 149889 680306 18.05 830195 69 148847 677363 18.02 826210 70 145629 660814 18.06 806443 71 144916 645208 18.34 790124 72 141813 642400 18.08 784213 73 140021 624991 18.30 765012 74 138813 618462 18.33 757275 75 136333 612364 18.21 748697 76 133497 601052 18.17 734549 77 133424 592260 18.39 725684 78 130056 585385 18.18 715441 79 128094 575717 18.20 703811 80 126951 571097 18.19 698048 81 124829 563664 18.13 688493 82 122850 552579 18.19 675429 83 122464 548620 18.25 671084 84 118805 547151 17.84 665956 85 116031 529816 17.97 645847 86 114285 523801 17.91 638086 87 112314 513009 17.96 625323 88 112358 508506 18.10 620864 89 108264 496410 17.90 604674 90 106617 493977 17.75 600594 91 106120 478192 18.16 584312 92 102507 466730 18.01 569237 93 101171 463646 17.91 564817 94 97138 443187 17.98 540325 95 95121 437539 17.86 532660 96 92536 433297 17.60 525833 97 90920 419890 17.80 510810 98 88682 412734 17.69 501416 99 87303 404007 17.77 491310 100 85577 393418 17.87 478995 101 84874 390775 17.84 475649 102 81911 385486 17.52 467397 103 80271 371833 17.75 452104 104 79885 364204 17.99 444089 105 78109 358539 17.89 436648 106 75106 348971 17.71 424077 107 73191 340049 17.71 413240 108 71980 340077 17.47 412057 109 70898 329768 17.70 400666 110 69504 321881 17.76 391385 111 67148 317605 17.45 384753 112 66354 309554 17.65 375908 113 64922 302898 17.65 367820 114 64153 297612 17.73 361765 115 62716 288892 17.84 351608 116 60313 285443 17.44 345756 117 59305 279990 17.48 339295 118 57033 273202 17.27 330235 119 55645 270194 17.08 325839 120 54330 259730 17.30 314060 121 53362 253455 17.39 306817 122 52756 247425 17.57 300181 123 50895 241416 17.41 292311 124 49864 233944 17.57 283808 125 49991 231112 17.78 281103 126 47653 226457 17.38 274110 127 45726 218885 17.28 264611 128 44605 214264 17.23 258869 129 43584 207463 17.36 251047 130 42323 202744 17.27 245067 131 41651 198638 17.33 240289 132 40453 194134 17.24 234587 133 39499 188514 17.32 228013 134 38914 183129 17.53 222043 135 37832 180438 17.33 218270 136 37643 176130 17.61 213773 137 36521 173744 17.37 210265 138 35118 168857 17.22 203975 139 34455 164035 17.36 198490 140 34164 161068 17.50 195232 141 32215 155563 17.16 187778 142 31102 150448 17.13 181550 143 30775 147542 17.26 178317 144 29462 145103 16.88 174565 145 28993 141559 17.00 170552 146 28283 139768 16.83 168051 147 28168 138445 16.91 166613 148 27590 133306 17.15 160896 149 26382 130717 16.79 157099 150 25198 126174 16.65 151372 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 225079 2973107 7.04 3198186 2 113321 1026193 9.94 1139514 3 82697 1407603 5.55 1490300 4 88543 1228934 6.72 1317477 5 34460 1568772 2.15 1603232 6 33722 1967121 1.69 2000843 7 27371 1313605 2.04 1340976 8 26546 1264771 2.06 1291317 9 26258 1296639 1.98 1322897 10 27801 1267135 2.15 1294936 11 34469 1281456 2.62 1315925 12 25391 1339624 1.86 1365015 13 24977 1366205 1.80 1391182 14 23572 1332566 1.74 1356138 15 24114 1309133 1.81 1333247 16 24816 1319942 1.85 1344758 17 22918 1343174 1.68 1366092 18 22953 1357203 1.66 1380156 19 22109 1304711 1.67 1326820 20 22478 1318405 1.68 1340883 21 22566 1327926 1.67 1350492 22 22082 1349848 1.61 1371930 23 22090 1350842 1.61 1372932 24 22075 1341741 1.62 1363816 25 22276 1358319 1.61 1380595 26 21773 1338120 1.60 1359893 27 21820 1337269 1.61 1359089 28 22188 1359573 1.61 1381761 29 22056 1350325 1.61 1372381 30 21825 1348199 1.59 1370024 31 21747 1346447 1.59 1368194 32 21748 1334306 1.60 1356054 33 21800 1357678 1.58 1379478 34 21883 1358246 1.59 1380129 35 21774 1355413 1.58 1377187 36 21660 1330292 1.60 1351952 37 21903 1371100 1.57 1393003 38 21626 1338379 1.59 1360005 39 22482 1365868 1.62 1388350 40 21358 1340854 1.57 1362212 41 21952 1352911 1.60 1374863 42 22137 1342748 1.62 1364885 43 22334 1355862 1.62 1378196 44 21961 1324616 1.63 1346577 45 22164 1325826 1.64 1347990 46 21970 1320154 1.64 1342124 47 21776 1302381 1.64 1324157 48 22295 1301382 1.68 1323677 49 22324 1323103 1.66 1345427 50 22025 1299407 1.67 1321432 51 22509 1300026 1.70 1322535 52 22418 1296766 1.70 1319184 53 22339 1297459 1.69 1319798 54 21890 1263935 1.70 1285825 55 22316 1282247 1.71 1304563 56 22133 1255344 1.73 1277477 57 22439 1259571 1.75 1282010 58 22144 1246829 1.75 1268973 59 22513 1233104 1.79 1255617 60 22430 1235274 1.78 1257704 61 23061 1244872 1.82 1267933 62 22272 1211135 1.81 1233407 63 22219 1195412 1.82 1217631 64 22206 1185673 1.84 1207879 65 22181 1181428 1.84 1203609 66 22291 1165837 1.88 1188128 67 22262 1170005 1.87 1192267 68 21806 1140204 1.88 1162010 69 22036 1135208 1.90 1157244 70 21597 1128632 1.88 1150229 71 21605 1103503 1.92 1125108 72 21113 1089411 1.90 1110524 73 21400 1082171 1.94 1103571 74 21115 1060658 1.95 1081773 75 21031 1045961 1.97 1066992 76 20849 1037224 1.97 1058073 77 20717 1014975 2.00 1035692 78 20349 997635 2.00 1017984 79 20452 990327 2.02 1010779 80 19670 963326 2.00 982996 81 20207 971378 2.04 991585 82 19508 937316 2.04 956824 83 19555 924279 2.07 943834 84 19294 908542 2.08 927836 85 19014 903664 2.06 922678 86 18497 878045 2.06 896542 87 18798 873018 2.11 891816 88 18454 859623 2.10 878077 89 18366 840926 2.14 859292 90 18240 831085 2.15 849325 91 17809 817711 2.13 835520 92 17383 794406 2.14 811789 93 17465 784789 2.18 802254 94 17013 775502 2.15 792515 95 16545 743520 2.18 760065 96 16509 729761 2.21 746270 97 16494 725826 2.22 742320 98 16118 695758 2.26 711876 99 15663 687820 2.23 703483 100 15488 678255 2.23 693743 101 15145 664443 2.23 679588 102 15367 664721 2.26 680088 103 14599 633989 2.25 648588 104 14313 616649 2.27 630962 105 14154 603706 2.29 617860 106 13960 591783 2.30 605743 107 13790 578179 2.33 591969 108 13447 568015 2.31 581462 109 13309 557887 2.33 571196 110 13124 541956 2.36 555080 111 12769 533495 2.34 546264 112 12546 525110 2.33 537656 113 12129 508766 2.33 520895 114 12091 498897 2.37 510988 115 11686 487111 2.34 498797 116 11643 473033 2.40 484676 117 11526 467500 2.41 479026 118 11193 453631 2.41 464824 119 10801 444269 2.37 455070 120 10805 435209 2.42 446014 121 10381 426763 2.37 437144 122 10264 413071 2.42 423335 123 9939 409285 2.37 419224 124 9889 394170 2.45 404059 125 9794 387861 2.46 397655 126 9445 378166 2.44 387611 127 9353 371764 2.45 381117 128 9217 361867 2.48 371084 129 9049 356551 2.48 365600 130 8698 342811 2.47 351509 131 8480 334372 2.47 342852 132 8542 330216 2.52 338758 133 8334 324247 2.51 332581 134 7995 313535 2.49 321530 135 7972 304474 2.55 312446 136 7760 300338 2.52 308098 137 7620 295875 2.51 303495 138 7472 286065 2.55 293537 139 7253 280078 2.52 287331 140 7057 267976 2.57 275033 141 6853 264615 2.52 271468 142 6651 257732 2.52 264383 143 6385 247793 2.51 254178 144 6272 246234 2.48 252506 145 6225 240986 2.52 247211 146 6009 236423 2.48 242432 147 5987 230975 2.53 236962 148 6285 225398 2.71 231683 149 6495 220065 2.87 226560 150 6297 214360 2.85 220657 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 633600 2490416 20.28 3124016 2 505546 3195263 13.66 3700809 3 391369 2967533 11.65 3358902 4 399920 2772053 12.61 3171973 5 198284 3452245 5.43 3650529 6 167036 3824047 4.19 3991083 7 167519 4371547 3.69 4539066 8 158905 4301862 3.56 4460767 9 143429 4053303 3.42 4196732 10 132198 3977361 3.22 4109559 11 138590 3906627 3.43 4045217 12 123738 3884215 3.09 4007953 13 126015 3943046 3.10 4069061 14 117527 3884074 2.94 4001601 15 123712 3807971 3.15 3931683 16 120768 3790129 3.09 3910897 17 118944 3740212 3.08 3859156 18 110042 3800524 2.81 3910566 19 119075 3812729 3.03 3931804 20 112135 3858456 2.82 3970591 21 112809 3766721 2.91 3879530 22 106162 3797355 2.72 3903517 23 115561 3821184 2.94 3936745 24 104509 3790063 2.68 3894572 25 113035 3846170 2.85 3959205 26 105626 3847232 2.67 3952858 27 108420 3833765 2.75 3942185 28 104405 3904346 2.60 4008751 29 109628 3914401 2.72 4024029 30 101431 3879488 2.55 3980919 31 107915 3895732 2.70 4003647 32 104212 3878820 2.62 3983032 33 103322 3884297 2.59 3987619 34 99755 3910032 2.49 4009787 35 103897 3892103 2.60 3996000 36 96582 3880860 2.43 3977442 37 103312 3910696 2.57 4014008 38 98833 3901251 2.47 4000084 39 102876 3881732 2.58 3984608 40 96529 3871374 2.43 3967903 41 101985 3964390 2.51 4066375 42 93324 3887586 2.34 3980910 43 101283 3885287 2.54 3986570 44 96656 3903548 2.42 4000204 45 99896 3901349 2.50 4001245 46 95812 3903094 2.40 3998906 47 101530 3898185 2.54 3999715 48 94043 3851645 2.38 3945688 49 98554 3876155 2.48 3974709 50 96545 3873123 2.43 3969668 51 99251 3840448 2.52 3939699 52 95484 3798767 2.45 3894251 53 97843 3784634 2.52 3882477 54 93653 3737555 2.44 3831208 55 95289 3723597 2.50 3818886 56 94889 3719912 2.49 3814801 57 94610 3673502 2.51 3768112 58 94580 3681148 2.50 3775728 59 98120 3661396 2.61 3759516 60 90531 3590865 2.46 3681396 61 92886 3572958 2.53 3665844 62 91995 3575588 2.51 3667583 63 91965 3476930 2.58 3568895 64 90019 3442469 2.55 3532488 65 93334 3408578 2.67 3501912 66 87039 3377447 2.51 3464486 67 91519 3373460 2.64 3464979 68 88728 3308166 2.61 3396894 69 88736 3297059 2.62 3385795 70 88198 3263171 2.63 3351369 71 89641 3202662 2.72 3292303 72 86155 3157594 2.66 3243749 73 86859 3140932 2.69 3227791 74 85761 3125008 2.67 3210769 75 84397 3044089 2.70 3128486 76 83217 2997284 2.70 3080501 77 83447 2967730 2.73 3051177 78 83085 2951631 2.74 3034716 79 82679 2901050 2.77 2983729 80 81303 2842520 2.78 2923823 81 79356 2799787 2.76 2879143 82 78789 2764549 2.77 2843338 83 80050 2693757 2.89 2773807 84 75910 2638019 2.80 2713929 85 75820 2593791 2.84 2669611 86 74682 2561815 2.83 2636497 87 75008 2509343 2.90 2584351 88 72353 2481012 2.83 2553365 89 74620 2445081 2.96 2519701 90 70549 2378956 2.88 2449505 91 72200 2348227 2.98 2420427 92 70207 2308535 2.95 2378742 93 69105 2260486 2.97 2329591 94 67962 2228414 2.96 2296376 95 68097 2191107 3.01 2259204 96 65757 2162132 2.95 2227889 97 65547 2119988 3.00 2185535 98 65098 2057166 3.07 2122264 99 63023 2009660 3.04 2072683 100 62733 1972945 3.08 2035678 101 61645 1939053 3.08 2000698 102 59649 1909470 3.03 1969119 103 60546 1879954 3.12 1940500 104 58517 1834664 3.09 1893181 105 58170 1807715 3.12 1865885 106 56125 1751069 3.11 1807194 107 55971 1709781 3.17 1765752 108 53418 1683477 3.08 1736895 109 54099 1637262 3.20 1691361 110 52927 1608067 3.19 1660994 111 52612 1588187 3.21 1640799 112 51012 1544729 3.20 1595741 113 50657 1505271 3.26 1555928 114 48625 1479948 3.18 1528573 115 48441 1446468 3.24 1494909 116 47887 1413146 3.28 1461033 117 46589 1377178 3.27 1423767 118 45338 1342831 3.27 1388169 119 45466 1314745 3.34 1360211 120 44124 1281043 3.33 1325167 121 43469 1252186 3.35 1295655 122 43032 1222429 3.40 1265461 123 40903 1192079 3.32 1232982 124 40480 1164985 3.36 1205465 125 40453 1141668 3.42 1182121 126 38249 1115048 3.32 1153297 127 38431 1092572 3.40 1131003 128 37313 1061962 3.39 1099275 129 36194 1038223 3.37 1074417 130 35768 1014517 3.41 1050285 131 36158 995473 3.50 1031631 132 33969 965835 3.40 999804 133 34014 945355 3.47 979369 134 32824 922315 3.44 955139 135 32071 899101 3.44 931172 136 31749 877968 3.49 909717 137 31164 860637 3.49 891801 138 30009 844487 3.43 874496 139 29398 823018 3.45 852416 140 28857 797380 3.49 826237 141 27825 776601 3.46 804426 142 27770 760017 3.53 787787 143 26837 740916 3.50 767753 144 26122 723199 3.49 749321 145 25850 711118 3.51 736968 146 25208 695149 3.50 720357 147 24453 682718 3.46 707171 148 25313 670614 3.64 695927 149 26203 657631 3.83 683834 150 25381 638380 3.82 663761 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 26700 97398 21.52 124098 2 27205 135891 16.68 163096 3 22415 179076 11.12 201491 4 24648 120689 16.96 145337 5 18106 150420 10.74 168526 6 14783 105976 12.24 120759 7 14774 93498 13.65 108272 8 16589 99714 14.26 116303 9 16434 95808 14.64 112242 10 16938 90307 15.79 107245 11 18780 92055 16.94 110835 12 22150 90981 19.58 113131 13 19392 88171 18.03 107563 14 17408 86135 16.81 103543 15 17374 83093 17.29 100467 16 17252 82246 17.34 99498 17 18136 83194 17.90 101330 18 16425 79590 17.11 96015 19 15303 74354 17.07 89657 20 15431 73853 17.28 89284 21 15273 73206 17.26 88479 22 14700 70939 17.17 85639 23 14623 69206 17.44 83829 24 14430 69526 17.19 83956 25 14323 67546 17.50 81869 26 13657 65304 17.30 78961 27 13380 64857 17.10 78237 28 12892 61705 17.28 74597 29 12694 60565 17.33 73259 30 12516 59241 17.44 71757 31 12060 57408 17.36 69468 32 11515 55869 17.09 67384 33 11179 54973 16.90 66152 34 11177 52955 17.43 64132 35 10986 52142 17.40 63128 36 10317 53221 16.24 63538 37 10120 49409 17.00 59529 38 10200 48400 17.41 58600 39 9945 47607 17.28 57552 40 9448 45018 17.35 54466 41 9237 44782 17.10 54019 42 9295 43900 17.47 53195 43 9014 42657 17.44 51671 44 9440 41513 18.53 50953 45 8759 40250 17.87 49009 46 8072 39083 17.12 47155 47 7999 38189 17.32 46188 48 7989 38114 17.33 46103 49 8014 36298 18.09 44312 50 7705 36014 17.62 43719 51 7443 34696 17.66 42139 52 7047 34015 17.16 41062 53 6770 32472 17.25 39242 54 6530 31852 17.01 38382 55 6411 31181 17.05 37592 56 6492 30443 17.58 36935 57 6394 29985 17.58 36379 58 6116 29023 17.41 35139 59 5854 27924 17.33 33778 60 5724 27530 17.21 33254 61 5645 26462 17.58 32107 62 5426 25173 17.73 30599 63 5273 24672 17.61 29945 64 5314 24424 17.87 29738 65 5177 24095 17.69 29272 66 5098 23311 17.95 28409 67 5100 22870 18.23 27970 68 4670 21866 17.60 26536 69 4566 21995 17.19 26561 70 4479 20879 17.66 25358 71 4374 20009 17.94 24383 72 4350 20053 17.83 24403 73 4204 19276 17.90 23480 74 4031 18694 17.74 22725 75 3989 18340 17.86 22329 76 3825 17679 17.79 21504 77 3792 17410 17.89 21202 78 3616 16853 17.67 20469 79 3472 16610 17.29 20082 80 3514 16156 17.86 19670 81 3443 15853 17.84 19296 82 3324 15545 17.62 18869 83 3396 14861 18.60 18257 84 3138 15001 17.30 18139 85 3057 14437 17.47 17494 86 2959 13944 17.51 16903 87 2790 13484 17.14 16274 88 2853 13344 17.61 16197 89 2635 12911 16.95 15546 90 2667 12809 17.23 15476 91 2645 12149 17.88 14794 92 2512 11671 17.71 14183 93 2593 12032 17.73 14625 94 2321 10833 17.64 13154 95 2223 10456 17.53 12679 96 2251 10714 17.36 12965 97 2093 9857 17.51 11950 98 2101 9963 17.42 12064 99 2014 9582 17.37 11596 100 2022 9197 18.02 11219 101 1947 9335 17.26 11282 102 1936 8973 17.75 10909 103 1849 8429 17.99 10278 104 1894 8311 18.56 10205 105 1793 8175 17.99 9968 106 1731 7906 17.96 9637 107 1588 7657 17.18 9245 108 1549 7802 16.57 9351 109 1609 7301 18.06 8910 110 1498 7175 17.27 8673 111 1501 6939 17.78 8440 112 1423 6637 17.66 8060 113 1423 6546 17.86 7969 114 1356 6212 17.92 7568 115 1420 6355 18.26 7775 116 1291 5981 17.75 7272 117 1377 6004 18.66 7381 118 1271 5624 18.43 6895 119 1223 5597 17.93 6820 120 1205 5281 18.58 6486 121 1126 5256 17.64 6382 122 1122 5010 18.30 6132 123 1070 4716 18.49 5786 124 1110 4774 18.86 5884 125 1072 4767 18.36 5839 126 1031 4660 18.12 5691 127 963 4389 17.99 5352 128 911 4342 17.34 5253 129 964 4201 18.66 5165 130 851 3943 17.75 4794 131 899 3826 19.03 4725 132 830 3833 17.80 4663 133 778 3667 17.50 4445 134 803 3567 18.38 4370 135 816 3500 18.91 4316 136 762 3457 18.06 4219 137 721 3418 17.42 4139 138 770 3374 18.58 4144 139 749 3229 18.83 3978 140 744 3093 19.39 3837 141 637 2971 17.66 3608 142 685 2957 18.81 3642 143 605 2778 17.88 3383 144 619 2830 17.95 3449 145 510 2683 15.97 3193 146 627 2749 18.57 3376 147 584 2771 17.41 3355 148 551 2592 17.53 3143 149 541 2444 18.12 2985 150 521 2369 18.03 2890 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 35483 451067 7.29 486550 2 19795 163911 10.78 183706 3 15230 191373 7.37 206603 4 14568 170966 7.85 185534 5 6158 209302 2.86 215460 6 5664 255697 2.17 261361 7 4815 172168 2.72 176983 8 4678 161425 2.82 166103 9 4227 163743 2.52 167970 10 5399 153794 3.39 159193 11 7809 148568 4.99 156377 12 3899 152268 2.50 156167 13 3841 150257 2.49 154098 14 3371 143856 2.29 147227 15 3509 139168 2.46 142677 16 3690 135201 2.66 138891 17 2904 135112 2.10 138016 18 2930 138333 2.07 141263 19 2756 125306 2.15 128062 20 2636 125893 2.05 128529 21 2408 121661 1.94 124069 22 2303 119537 1.89 121840 23 2241 117766 1.87 120007 24 2152 112671 1.87 114823 25 2082 113308 1.80 115390 26 1965 108094 1.79 110059 27 1931 107246 1.77 109177 28 1960 106637 1.80 108597 29 1867 104375 1.76 106242 30 1685 101021 1.64 102706 31 1629 96056 1.67 97685 32 1527 93050 1.61 94577 33 1521 93886 1.59 95407 34 1525 91055 1.65 92580 35 1448 87997 1.62 89445 36 1414 84923 1.64 86337 37 1403 86399 1.60 87802 38 1372 80639 1.67 82011 39 1313 83532 1.55 84845 40 1252 77416 1.59 78668 41 1197 77484 1.52 78681 42 1175 74695 1.55 75870 43 1249 73765 1.67 75014 44 1167 69024 1.66 70191 45 1165 68751 1.67 69916 46 1091 66485 1.61 67576 47 1114 64140 1.71 65254 48 1079 62851 1.69 63930 49 1072 62602 1.68 63674 50 1023 59871 1.68 60894 51 985 60000 1.62 60985 52 973 57596 1.66 58569 53 958 56394 1.67 57352 54 890 52563 1.67 53453 55 875 54048 1.59 54923 56 887 50914 1.71 51801 57 820 50837 1.59 51657 58 850 48612 1.72 49462 59 804 47502 1.66 48306 60 819 48082 1.67 48901 61 770 46391 1.63 47161 62 759 45236 1.65 45995 63 754 43600 1.70 44354 64 760 41558 1.80 42318 65 697 41380 1.66 42077 66 711 39718 1.76 40429 67 682 40322 1.66 41004 68 646 38374 1.66 39020 69 645 37962 1.67 38607 70 630 37088 1.67 37718 71 644 36204 1.75 36848 72 593 35320 1.65 35913 73 595 34051 1.72 34646 74 604 33504 1.77 34108 75 535 32332 1.63 32867 76 570 31776 1.76 32346 77 515 30573 1.66 31088 78 472 29033 1.60 29505 79 537 29182 1.81 29719 80 496 27802 1.75 28298 81 465 28780 1.59 29245 82 481 26147 1.81 26628 83 447 26416 1.66 26863 84 416 25071 1.63 25487 85 474 24924 1.87 25398 86 410 23696 1.70 24106 87 420 24162 1.71 24582 88 437 23239 1.85 23676 89 422 22474 1.84 22896 90 402 22657 1.74 23059 91 374 21891 1.68 22265 92 399 21278 1.84 21677 93 368 20931 1.73 21299 94 347 20487 1.67 20834 95 345 18842 1.80 19187 96 359 18467 1.91 18826 97 329 18236 1.77 18565 98 343 17117 1.96 17460 99 337 17172 1.92 17509 100 306 16686 1.80 16992 101 338 16555 2.00 16893 102 298 17203 1.70 17501 103 274 15542 1.73 15816 104 281 15012 1.84 15293 105 285 14257 1.96 14542 106 252 13724 1.80 13976 107 276 13962 1.94 14238 108 245 13161 1.83 13406 109 256 12918 1.94 13174 110 212 12568 1.66 12780 111 227 12338 1.81 12565 112 220 12245 1.76 12465 113 203 11694 1.71 11897 114 233 11742 1.95 11975 115 213 11246 1.86 11459 116 194 10667 1.79 10861 117 212 10772 1.93 10984 118 194 10107 1.88 10301 119 178 10004 1.75 10182 120 201 9535 2.06 9736 121 167 9533 1.72 9700 122 159 9006 1.73 9165 123 155 9184 1.66 9339 124 147 8849 1.63 8996 125 176 8948 1.93 9124 126 142 8211 1.70 8353 127 151 8356 1.78 8507 128 164 8169 1.97 8333 129 155 8058 1.89 8213 130 134 7356 1.79 7490 131 141 7226 1.91 7367 132 131 7332 1.76 7463 133 157 7330 2.10 7487 134 143 6912 2.03 7055 135 119 6836 1.71 6955 136 124 6574 1.85 6698 137 117 6656 1.73 6773 138 108 6172 1.72 6280 139 100 6120 1.61 6220 140 104 5999 1.70 6103 141 92 5764 1.57 5856 142 106 5625 1.85 5731 143 100 5291 1.85 5391 144 83 5496 1.49 5579 145 89 5322 1.64 5411 146 97 5260 1.81 5357 147 104 4989 2.04 5093 148 100 4930 1.99 5030 149 131 4933 2.59 5064 150 110 4743 2.27 4853 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 99363 420695 19.11 520058 2 86617 520623 14.26 607240 3 65416 469073 12.24 534489 4 66087 421783 13.55 487870 5 33761 493969 6.40 527730 6 30144 528743 5.39 558887 7 27916 596229 4.47 624145 8 29001 571281 4.83 600282 9 22892 521554 4.20 544446 10 21846 504509 4.15 526355 11 22446 475775 4.51 498221 12 20600 465658 4.24 486258 13 18719 467677 3.85 486396 14 17955 451442 3.83 469397 15 18824 436221 4.14 455045 16 19349 415828 4.45 435177 17 16380 404917 3.89 421297 18 14965 402597 3.58 417562 19 15257 396275 3.71 411532 20 14393 392099 3.54 406492 21 13914 368071 3.64 381985 22 12314 364546 3.27 376860 23 13225 357501 3.57 370726 24 11586 348841 3.21 360427 25 11867 345837 3.32 357704 26 11003 336255 3.17 347258 27 10863 328941 3.20 339804 28 10056 326262 2.99 336318 29 10260 316869 3.14 327129 30 9270 309003 2.91 318273 31 9506 303052 3.04 312558 32 9596 293195 3.17 302791 33 8642 288623 2.91 297265 34 8669 279630 3.01 288299 35 8591 272827 3.05 281418 36 7968 265245 2.92 273213 37 8128 262073 3.01 270201 38 7888 255371 3.00 263259 39 8042 249753 3.12 257795 40 7376 241488 2.96 248864 41 7663 240725 3.09 248388 42 6507 230605 2.74 237112 43 7426 225751 3.18 233177 44 6707 220327 2.95 227034 45 7120 218022 3.16 225142 46 6615 211285 3.04 217900 47 6955 207238 3.25 214193 48 6123 199322 2.98 205445 49 6152 196678 3.03 202830 50 6205 192948 3.12 199153 51 6203 187696 3.20 193899 52 5808 181179 3.11 186987 53 6036 177109 3.30 183145 54 5789 171335 3.27 177124 55 5309 166633 3.09 171942 56 5780 164063 3.40 169843 57 5365 158938 3.27 164303 58 5400 156655 3.33 162055 59 5797 154354 3.62 160151 60 4786 147395 3.14 152181 61 5095 144080 3.42 149175 62 5058 143767 3.40 148825 63 4744 135578 3.38 140322 64 4570 132232 3.34 136802 65 5124 128926 3.82 134050 66 4058 126426 3.11 130484 67 4731 126531 3.60 131262 68 4397 120857 3.51 125254 69 4347 119912 3.50 124259 70 4268 115490 3.56 119758 71 4412 111208 3.82 115620 72 4077 109577 3.59 113654 73 4087 106957 3.68 111044 74 4000 106936 3.61 110936 75 3771 100809 3.61 104580 76 4115 97639 4.04 101754 77 3686 96801 3.67 100487 78 3561 96000 3.58 99561 79 3627 94278 3.70 97905 80 3516 90265 3.75 93781 81 3351 88075 3.67 91426 82 3374 86864 3.74 90238 83 3599 82815 4.16 86414 84 3047 80364 3.65 83411 85 3126 78226 3.84 81352 86 3036 76577 3.81 79613 87 3208 74326 4.14 77534 88 2632 73589 3.45 76221 89 3219 71822 4.29 75041 90 2630 68198 3.71 70828 91 2872 67984 4.05 70856 92 2815 66004 4.09 68819 93 2525 63697 3.81 66222 94 2614 63014 3.98 65628 95 2655 61457 4.14 64112 96 2371 60990 3.74 63361 97 2411 59499 3.89 61910 98 2608 56267 4.43 58875 99 2159 54354 3.82 56513 100 2350 52687 4.27 55037 101 2309 51973 4.25 54282 102 1942 51044 3.67 52986 103 2172 50589 4.12 52761 104 2127 48585 4.19 50712 105 2049 48100 4.09 50149 106 1933 45849 4.05 47782 107 1968 44153 4.27 46121 108 1745 43703 3.84 45448 109 2026 42040 4.60 44066 110 1671 40736 3.94 42407 111 1815 40881 4.25 42696 112 1671 38958 4.11 40629 113 1742 37967 4.39 39709 114 1540 37308 3.96 38848 115 1623 36105 4.30 37728 116 1641 35132 4.46 36773 117 1532 34145 4.29 35677 118 1390 33097 4.03 34487 119 1501 32154 4.46 33655 120 1466 30697 4.56 32163 121 1276 30033 4.08 31309 122 1481 29057 4.85 30538 123 1254 28389 4.23 29643 124 1285 27653 4.44 28938 125 1356 27315 4.73 28671 126 1111 26230 4.06 27341 127 1161 25734 4.32 26895 128 1100 25004 4.21 26104 129 1104 24678 4.28 25782 130 1076 24155 4.26 25231 131 1219 23525 4.93 24744 132 925 22743 3.91 23668 133 1087 22096 4.69 23183 134 970 21704 4.28 22674 135 950 20772 4.37 21722 136 931 20247 4.40 21178 137 959 20211 4.53 21170 138 860 19907 4.14 20767 139 921 19511 4.51 20432 140 838 18501 4.33 19339 141 850 18038 4.50 18888 142 899 17745 4.82 18644 143 795 17050 4.46 17845 144 783 16697 4.48 17480 145 757 16729 4.33 17486 146 768 16172 4.53 16940 147 705 15973 4.23 16678 148 702 16112 4.18 16814 149 772 15372 4.78 16144 150 659 14963 4.22 15622